RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 MARCH5Q9NX47 278 aa9.78□□□□□ -0.84
ACTN1-218ENST00000556343 NAGPAQ9UK23 515 aa9.78□□□□□ -0.84
ACTN1-218ENST00000556343 PCDHA11Q9Y5I1 949 aa9.78□□□□□ -0.84
ACTN1-218ENST00000556343 ANK1P16157 1881 aa9.78□□□□□ -0.84
ACTN1-218ENST00000556343 MICAL3Q7RTP6 2002 aa9.78□□□□□ -0.84
ACTN1-218ENST00000556343 A0A087X0T9 212 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 H0YGN5 161 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 M0QYV0 167 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 DDX3XO00571 662 aaKnown RBP eCLIP9.77□□□□□ -0.85
ACTN1-218ENST00000556343 KRT86O43790 486 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 B4GALT3O60512 393 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 FGF18O76093 207 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 MICAL2O94851 1124 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 ITGB1P05556 798 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 CALB1P05937 261 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 FAM228BP0C875 321 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 FAM200BP0CF97 657 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 MYBL1P10243 752 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 CHRNB2P17787 502 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 LMO2P25791 158 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 CTNNB1P35222 781 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 GLUD2P49448 558 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 RGS19P49795 217 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 BCAT1P54687 386 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 CYP27A1Q02318 531 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 UBE3AQ05086 875 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 MRPL58Q14197 206 aaKnown RBP9.77□□□□□ -0.85
ACTN1-218ENST00000556343 GOLGA7BQ2TAP0 167 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 ARHGAP29Q52LW3 1261 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 MDH1BQ5I0G3 518 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 ERICH1Q86X53 443 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 ANKRD52Q8NB46 1076 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 SLC30A5Q8TAD4 765 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 IPO4Q8TEX9 1081 aaKnown RBP9.77□□□□□ -0.85
ACTN1-218ENST00000556343 C2orf15Q8WU43 125 aaKnown RBP9.77□□□□□ -0.85
ACTN1-218ENST00000556343 CTNNBL1Q8WYA6 563 aaPredicted RBP9.77□□□□□ -0.85
ACTN1-218ENST00000556343 DDX1Q92499 740 aaKnown RBP9.77□□□□□ -0.85
ACTN1-218ENST00000556343 VCPIP1Q96JH7 1222 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 TWNKQ96RR1 684 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 HNRNPABQ99729 332 aaKnown RBP9.77□□□□□ -0.85
ACTN1-218ENST00000556343 GDF15Q99988 308 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 C11orf84Q9BUA3 381 aaPredicted RBP9.77□□□□□ -0.85
ACTN1-218ENST00000556343 GPR62Q9BZJ7 368 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 MRPL17Q9NRX2 175 aaKnown RBP9.77□□□□□ -0.85
ACTN1-218ENST00000556343 SPTLC3Q9NUV7 552 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.77□□□□□ -0.85
ACTN1-218ENST00000556343 LZTS1Q9Y250 596 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 PPP2R2CQ9Y2T4 447 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 BACE2Q9Y5Z0 518 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 ADGRG1Q9Y653 693 aa9.77□□□□□ -0.85
ACTN1-218ENST00000556343 TRIP11Q15643 1979 aa9.76□□□□□ -0.85
ACTN1-218ENST00000556343 ANKRD62A6NC57 917 aa9.76□□□□□ -0.85
ACTN1-218ENST00000556343 O00370 1275 aa9.76□□□□□ -0.85
ACTN1-218ENST00000556343 FTLP02792 175 aaPredicted RBP9.76□□□□□ -0.85
ACTN1-218ENST00000556343 TUBB4AP04350 444 aa9.76□□□□□ -0.85
ACTN1-218ENST00000556343 CYP1A1P04798 512 aaPredicted RBP9.76□□□□□ -0.85
ACTN1-218ENST00000556343 UNGP13051 313 aaPredicted RBP9.76□□□□□ -0.85
ACTN1-218ENST00000556343 IGFBP6P24592 240 aaPredicted RBP9.76□□□□□ -0.85
ACTN1-218ENST00000556343 ACAT1P24752 427 aaKnown RBP9.76□□□□□ -0.85
ACTN1-218ENST00000556343 ADORA2BP29275 332 aa9.76□□□□□ -0.85
ACTN1-218ENST00000556343 CDH5P33151 784 aaPredicted RBP9.76□□□□□ -0.85
ACTN1-218ENST00000556343 PBX3P40426 434 aa9.76□□□□□ -0.85
ACTN1-218ENST00000556343 ACADSBP45954 432 aa9.76□□□□□ -0.85
ACTN1-218ENST00000556343 VAV2P52735 878 aa9.76□□□□□ -0.85
ACTN1-218ENST00000556343 NAP1L1P55209 391 aaKnown RBP9.76□□□□□ -0.85
ACTN1-218ENST00000556343 PSMC1P62191 440 aaKnown RBP9.76□□□□□ -0.85
ACTN1-218ENST00000556343 GPC5P78333 572 aa9.76□□□□□ -0.85
ACTN1-218ENST00000556343 DSG1Q02413 1049 aa9.76□□□□□ -0.85
ACTN1-218ENST00000556343 CENPCQ03188 943 aa9.76□□□□□ -0.85
ACTN1-218ENST00000556343 BST2Q10589 180 aaKnown RBP9.76□□□□□ -0.85
ACTN1-218ENST00000556343 ORC1Q13415 861 aa9.76□□□□□ -0.85
ACTN1-218ENST00000556343 MTF1Q14872 753 aa9.76□□□□□ -0.85
ACTN1-218ENST00000556343 PSMD5Q16401 504 aa9.76□□□□□ -0.85
ACTN1-218ENST00000556343 C9orf50Q5SZB4 431 aa9.76□□□□□ -0.85
ACTN1-218ENST00000556343 PPP1R26Q5T8A7 1209 aaPredicted RBP9.76□□□□□ -0.85
ACTN1-218ENST00000556343 PDE12Q6L8Q7 609 aaKnown RBP9.76□□□□□ -0.85
ACTN1-218ENST00000556343 FAM171BQ6P995 826 aa9.76□□□□□ -0.85
ACTN1-218ENST00000556343 ZNF662Q6ZS27 426 aa9.76□□□□□ -0.85
ACTN1-218ENST00000556343 TOGARAM2Q6ZUX3 1019 aa9.76□□□□□ -0.85
ACTN1-218ENST00000556343 VPS52Q8N1B4 723 aa9.76□□□□□ -0.85
ACTN1-218ENST00000556343 KLHL23Q8NBE8 558 aa9.76□□□□□ -0.85
ACTN1-218ENST00000556343 KIAA1524Q8TCG1 905 aa9.76□□□□□ -0.85
ACTN1-218ENST00000556343 SLC2A14Q8TDB8 520 aa9.76□□□□□ -0.85
ACTN1-218ENST00000556343 STK32AQ8WU08 396 aa9.76□□□□□ -0.85
ACTN1-218ENST00000556343 SLC20A1Q8WUM9 679 aa9.76□□□□□ -0.85
ACTN1-218ENST00000556343 RIN2Q8WYP3 895 aaPredicted RBP9.76□□□□□ -0.85
ACTN1-218ENST00000556343 PIK3R5Q8WYR1 880 aa9.76□□□□□ -0.85
ACTN1-218ENST00000556343 TFAP2BQ92481 460 aa9.76□□□□□ -0.85
ACTN1-218ENST00000556343 SMARCD1Q96GM5 515 aa9.76□□□□□ -0.85
ACTN1-218ENST00000556343 FUBP3Q96I24 572 aaKnown RBP eCLIP9.76□□□□□ -0.85
ACTN1-218ENST00000556343 HSFY1Q96LI6 401 aa9.76□□□□□ -0.85
ACTN1-218ENST00000556343 TGS1Q96RS0 853 aaKnown RBP9.76□□□□□ -0.85
ACTN1-218ENST00000556343 SYT11Q9BT88 431 aa9.76□□□□□ -0.85
ACTN1-218ENST00000556343 DUSP16Q9BY84 665 aa9.76□□□□□ -0.85
ACTN1-218ENST00000556343 UBXN6Q9BZV1 441 aa9.76□□□□□ -0.85
ACTN1-218ENST00000556343 ZCWPW1Q9H0M4 648 aa9.76□□□□□ -0.85
ACTN1-218ENST00000556343 ISCUQ9H1K1 167 aa9.76□□□□□ -0.85
ACTN1-218ENST00000556343 DPEP3Q9H4B8 488 aa9.76□□□□□ -0.85
ACTN1-218ENST00000556343 NGRNQ9NPE2 291 aaKnown RBP9.76□□□□□ -0.85
ACTN1-218ENST00000556343 ACP6Q9NPH0 428 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms