RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 SF3B1O75533 1304 aaKnown RBP eCLIP7.61□□□□□ -1.194e-12■■■■■ 275.7
ATXN3-236ENST00000556220 NBEAQ8NFP9 2946 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 HMX2A2RU54 273 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 MEGF11A6BM72 1044 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 MSH4O15457 936 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 CHMP2AO43633 222 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 MED26O95402 600 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 SRGAP2CP0DJJ0 459 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 ACPPP15309 386 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 CEBPBP17676 345 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 PSMC3P17980 439 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 AXLP30530 894 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 GDI1P31150 447 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 HOXC13P31276 330 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 MCM5P33992 734 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 GRIK1P39086 918 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 EHHADHQ08426 723 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 C19orf57Q0VDD7 668 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 LRRC32Q14392 662 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 PSMD5Q16401 504 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 SOWAHCQ53LP3 525 aaPredicted RBP7.61□□□□□ -1.19
ATXN3-236ENST00000556220 FAM78AQ5JUQ0 283 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 FAM171A1Q5VUB5 890 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 C1orf228Q6PIY5 440 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 KBTBD6Q86V97 674 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 CEP57Q86XR8 500 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 RDM1Q8NG50 284 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 GAB3Q8WWW8 586 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 SLC7A3Q8WY07 619 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 BSNDQ8WZ55 320 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 CCDC51Q96ER9 411 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 RIT2Q99578 217 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 UNC45AQ9H3U1 944 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 SMOC1Q9H4F8 434 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 VPS45Q9NRW7 570 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 RBM12Q9NTZ6 932 aaKnown RBP7.61□□□□□ -1.19
ATXN3-236ENST00000556220 RBM28Q9NW13 759 aaKnown RBP7.61□□□□□ -1.19
ATXN3-236ENST00000556220 C2orf42Q9NWW7 574 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 HIF3AQ9Y2N7 669 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 FREM2Q5SZK8 3169 aa7.61□□□□□ -1.19
ATXN3-236ENST00000556220 PCNX2A6NKB5 2137 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 ACACAQ13085 2346 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 CCDC163A0A0D9SF12 145 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 A6NHS1 94 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 C4orf47A7E2U8 309 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 ZNF263O14978 683 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 ASAP2O43150 1006 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 EDIL3O43854 480 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 GAS7O60861 476 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 RPP40O75818 363 aaKnown RBP7.6□□□□□ -1.19
ATXN3-236ENST00000556220 FAM13AO94988 1023 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 CEACAM1P13688 526 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 EDN3P14138 238 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 PTPN2P17706 415 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 AKAP5P24588 427 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 OR1D2P34982 312 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 NLRP12P59046 1061 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 NCBP1Q09161 790 aaKnown RBP7.6□□□□□ -1.19
ATXN3-236ENST00000556220 LAMTOR4Q0VGL1 99 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 GRIK3Q13003 919 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 HSP90AA2PQ14568 343 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-236ENST00000556220 PCBP1Q15365 356 aaKnown RBP eCLIP7.6□□□□□ -1.19
ATXN3-236ENST00000556220 DGKKQ5KSL6 1271 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 DAB2IPQ5VWQ8 1189 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 MCTP1Q6DN14 999 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 B4GALNT3Q6L9W6 998 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 NOTUMQ6P988 496 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 PDXDC1Q6P996 788 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 VITQ6UXI7 678 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 Q6ZS52 159 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 ANO5Q75V66 913 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 SGMS1Q86VZ5 419 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 CHD1LQ86WJ1 897 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 MICU3Q86XE3 530 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 MFSD6LQ8IWD5 586 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 DEPDC1BQ8WUY9 529 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 PRPF31Q8WWY3 499 aaKnown RBP7.6□□□□□ -1.19
ATXN3-236ENST00000556220 RUFY2Q8WXA3 655 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 PSPC1Q8WXF1 523 aaKnown RBP7.6□□□□□ -1.19
ATXN3-236ENST00000556220 SLC5A5Q92911 643 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 SMARCD2Q92925 531 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 TCEAL4Q96EI5 215 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 MSANTD3Q96H12 275 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 ZC3H10Q96K80 434 aaKnown RBP7.6□□□□□ -1.19
ATXN3-236ENST00000556220 ASB16Q96NS5 453 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 PAAF1Q9BRP4 392 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 RUSC1Q9BVN2 902 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 APOL6Q9BWW8 343 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 TEKT3Q9BXF9 490 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 CSRNP2Q9H175 543 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 C8orf33Q9H7E9 229 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-236ENST00000556220 NOTCH4Q99466 2003 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 BPTFQ12830 3046 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 AKAP13Q12802 2813 aa7.6□□□□□ -1.19
ATXN3-236ENST00000556220 ARHGEF37A1IGU5 675 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 ARNTLO00327 626 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 ZNF197O14709 1029 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 ADAMTS3O15072 1205 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 TSPAN1O60635 241 aa7.59□□□□□ -1.19
ATXN3-236ENST00000556220 TNFRSF21O75509 655 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms