RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-223	ENST00000556142	TMEM191C	A6NGB0	347 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	TMEM110-MUSTN1	A8MSY1	372 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	TLR3	O15455	904 aa	Known RBP	10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	XPOT	O43592	962 aa	Known RBP	10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	CAND2	O75155	1236 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	PROSC	O94903	275 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	CALB1	P05937	261 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	TUBB	P07437	444 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	PFKM	P08237	780 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	IGFBP6	P24592	240 aa	Predicted RBP	10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	CD52	P31358	61 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	SLC1A1	P43005	524 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	GPD2	P43304	727 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	GABRB2	P47870	512 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	RNASE9	P60153	205 aa	Known RBP	10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	NFX1	Q12986	1120 aa	Known RBP	10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	SOWAHA	Q2M3V2	549 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	PTPN20	Q4JDL3	420 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	PKDCC	Q504Y2	493 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	CC2D1A	Q6P1N0	951 aa	Predicted RBP	10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	AGMO	Q6ZNB7	445 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	MTERF4	Q7Z6M4	381 aa	Known RBP	10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	UNC93A	Q86WB7	457 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	HDAC7	Q8WUI4	952 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	KBTBD7	Q8WVZ9	684 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	TSPYL2	Q9H2G4	693 aa	Predicted RBP	10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	MRPL47	Q9HD33	250 aa	Known RBP	10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	PARVA	Q9NVD7	372 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	TJP2	Q9UDY2	1190 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	DMGDH	Q9UI17	866 aa	Known RBP	10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	PHF24	Q9UPV7	400 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	GIT1	Q9Y2X7	761 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142	SNX9	Q9Y5X1	595 aa		10.05	□□□□□ -0.8
HNRNPC-223	ENST00000556142		A0A1W2PQ45	241 aa	Predicted RBP	10.04	□□□□□ -0.8
HNRNPC-223	ENST00000556142		A0A1W2PQY0	241 aa		10.04	□□□□□ -0.8
HNRNPC-223	ENST00000556142	CCDC66	A2RUB6	948 aa		10.04	□□□□□ -0.8
HNRNPC-223	ENST00000556142	PGRMC1	O00264	195 aa	Known RBP	10.04	□□□□□ -0.8
HNRNPC-223	ENST00000556142	GJB6	O95452	261 aa		10.04	□□□□□ -0.8
HNRNPC-223	ENST00000556142	FAM163B	P0C2L3	166 aa		10.04	□□□□□ -0.8
HNRNPC-223	ENST00000556142	PYGM	P11217	842 aa		10.04	□□□□□ -0.8
HNRNPC-223	ENST00000556142	FGFR1	P11362	822 aa		10.04	□□□□□ -0.8
HNRNPC-223	ENST00000556142	ITGA4	P13612	1032 aa		10.04	□□□□□ -0.8
HNRNPC-223	ENST00000556142	CD19	P15391	556 aa		10.04	□□□□□ -0.8
HNRNPC-223	ENST00000556142	ATF7	P17544	494 aa	Predicted RBP	10.04	□□□□□ -0.8
HNRNPC-223	ENST00000556142	MAN1A1	P33908	653 aa		10.04	□□□□□ -0.8
HNRNPC-223	ENST00000556142	AFF1	P51825	1210 aa	Known RBP	10.04	□□□□□ -0.8
HNRNPC-223	ENST00000556142	ZNF252P-AS1	Q0IIN9	211 aa		10.04	□□□□□ -0.8
HNRNPC-223	ENST00000556142	GLE1	Q53GS7	698 aa	Known RBP	10.04	□□□□□ -0.8
HNRNPC-223	ENST00000556142	BEND6	Q5SZJ8	279 aa	Predicted RBP	10.04	□□□□□ -0.8
HNRNPC-223	ENST00000556142	ZNF618	Q5T7W0	954 aa		10.04	□□□□□ -0.8
HNRNPC-223	ENST00000556142	ARHGAP17	Q68EM7	881 aa		10.04	□□□□□ -0.8
HNRNPC-223	ENST00000556142	FAM109B	Q6ICB4	259 aa	Predicted RBP	10.04	□□□□□ -0.8
HNRNPC-223	ENST00000556142	AADACL2	Q6P093	401 aa		10.04	□□□□□ -0.8
HNRNPC-223	ENST00000556142	LCLAT1	Q6UWP7	414 aa		10.04	□□□□□ -0.8
HNRNPC-223	ENST00000556142	ERICH1	Q86X53	443 aa		10.04	□□□□□ -0.8
HNRNPC-223	ENST00000556142	ZDHHC14	Q8IZN3	488 aa		10.04	□□□□□ -0.8
HNRNPC-223	ENST00000556142	CRYBG2	Q8N1P7	616 aa		10.04	□□□□□ -0.8
HNRNPC-223	ENST00000556142	HEXIM2	Q96MH2	286 aa	Known RBP	10.04	□□□□□ -0.8
HNRNPC-223	ENST00000556142	ZFP42	Q96MM3	310 aa		10.04	□□□□□ -0.8
HNRNPC-223	ENST00000556142	GLT1D1	Q96MS3	346 aa		10.04	□□□□□ -0.8
HNRNPC-223	ENST00000556142	GUCD1	Q96NT3	240 aa		10.04	□□□□□ -0.8
HNRNPC-223	ENST00000556142	NT5C1A	Q9BXI3	368 aa		10.04	□□□□□ -0.8
HNRNPC-223	ENST00000556142	GOLGA2P5	Q9HBQ8	144 aa		10.04	□□□□□ -0.8
HNRNPC-223	ENST00000556142	NR2E1	Q9Y466	385 aa		10.04	□□□□□ -0.8
HNRNPC-223	ENST00000556142	SCIN	Q9Y6U3	715 aa		10.04	□□□□□ -0.8
HNRNPC-223	ENST00000556142	PDCD11	Q14690	1871 aa	Known RBP	10.04	□□□□□ -0.8
HNRNPC-223	ENST00000556142		A0A0U1RQF3	1178 aa		10.03	□□□□□ -0.8
HNRNPC-223	ENST00000556142	KPNA7	A9QM74	516 aa		10.03	□□□□□ -0.8
HNRNPC-223	ENST00000556142	MYO1F	O00160	1098 aa		10.03	□□□□□ -0.8
HNRNPC-223	ENST00000556142	SEC31A	O94979	1220 aa	Known RBP	10.03	□□□□□ -0.8
HNRNPC-223	ENST00000556142	ERBB2	P04626	1255 aa		10.03	□□□□□ -0.8
HNRNPC-223	ENST00000556142	GHR	P10912	638 aa		10.03	□□□□□ -0.8
HNRNPC-223	ENST00000556142	CKB	P12277	381 aa		10.03	□□□□□ -0.8
HNRNPC-223	ENST00000556142	PNPLA4	P41247	253 aa		10.03	□□□□□ -0.8
HNRNPC-223	ENST00000556142	TAF6	P49848	677 aa		10.03	□□□□□ -0.8
HNRNPC-223	ENST00000556142	CDK7	P50613	346 aa		10.03	□□□□□ -0.8
HNRNPC-223	ENST00000556142	RPL7A	P62424	266 aa	Known RBP	10.03	□□□□□ -0.8
HNRNPC-223	ENST00000556142	OGDH	Q02218	1023 aa		10.03	□□□□□ -0.8
HNRNPC-223	ENST00000556142	ZNF211	Q13398	564 aa	Predicted RBP	10.03	□□□□□ -0.8
HNRNPC-223	ENST00000556142	SGO2	Q562F6	1265 aa		10.03	□□□□□ -0.8
HNRNPC-223	ENST00000556142	CCNI2	Q6ZMN8	369 aa	Predicted RBP	10.03	□□□□□ -0.8
HNRNPC-223	ENST00000556142	RTN4RL1	Q86UN2	441 aa	Predicted RBP	10.03	□□□□□ -0.8
HNRNPC-223	ENST00000556142	UBL4B	Q8N7F7	174 aa		10.03	□□□□□ -0.8
HNRNPC-223	ENST00000556142	C12orf29	Q8N999	325 aa		10.03	□□□□□ -0.8
HNRNPC-223	ENST00000556142	C3orf20	Q8ND61	904 aa		10.03	□□□□□ -0.8
HNRNPC-223	ENST00000556142	RUBCN	Q92622	972 aa		10.03	□□□□□ -0.8
HNRNPC-223	ENST00000556142	LPP	Q93052	612 aa		10.03	□□□□□ -0.8
HNRNPC-223	ENST00000556142	DDX27	Q96GQ7	796 aa	Known RBP	10.03	□□□□□ -0.8
HNRNPC-223	ENST00000556142	RNPC3	Q96LT9	517 aa	Known RBP	10.03	□□□□□ -0.8
HNRNPC-223	ENST00000556142	ZNF560	Q96MR9	790 aa		10.03	□□□□□ -0.8
HNRNPC-223	ENST00000556142	CPXM1	Q96SM3	734 aa		10.03	□□□□□ -0.8
HNRNPC-223	ENST00000556142	TRPV6	Q9H1D0	765 aa		10.03	□□□□□ -0.8
HNRNPC-223	ENST00000556142	ARGLU1	Q9NWB6	273 aa	Predicted RBP	10.03	□□□□□ -0.8
HNRNPC-223	ENST00000556142	CIT	O14578	2027 aa		10.03	□□□□□ -0.8
HNRNPC-223	ENST00000556142	SIGLEC16	A6NMB1	481 aa		10.02	□□□□□ -0.81
HNRNPC-223	ENST00000556142	CCDC188	H7C350	402 aa		10.02	□□□□□ -0.81
HNRNPC-223	ENST00000556142	ARVCF	O00192	962 aa		10.02	□□□□□ -0.81
HNRNPC-223	ENST00000556142	INPPL1	O15357	1258 aa		10.02	□□□□□ -0.81
HNRNPC-223	ENST00000556142	ATP8B1	O43520	1251 aa		10.02	□□□□□ -0.81
HNRNPC-223	ENST00000556142	HCRT	O43612	131 aa		10.02	□□□□□ -0.81

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