RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 ARHGAP17Q68EM7 881 aa13.26□□□□□ -0.29
SHMT2-221ENST00000555773 GPR153Q6NV75 609 aa13.26□□□□□ -0.29
SHMT2-221ENST00000555773 ZNF677Q86XU0 584 aa13.26□□□□□ -0.29
SHMT2-221ENST00000555773 SPC24Q8NBT2 197 aa13.26□□□□□ -0.29
SHMT2-221ENST00000555773 OR10T2Q8NGX3 314 aa13.26□□□□□ -0.29
SHMT2-221ENST00000555773 C2orf15Q8WU43 125 aaKnown RBP13.26□□□□□ -0.29
SHMT2-221ENST00000555773 PKMYT1Q99640 499 aa13.26□□□□□ -0.29
SHMT2-221ENST00000555773 HMGXB4Q9UGU5 601 aa13.26□□□□□ -0.29
SHMT2-221ENST00000555773 NME7Q9Y5B8 376 aa13.26□□□□□ -0.29
SHMT2-221ENST00000555773 CDY1Q9Y6F8 540 aa13.26□□□□□ -0.29
SHMT2-221ENST00000555773 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-221ENST00000555773 MYBPHLA2RUH7 354 aa13.25□□□□□ -0.29
SHMT2-221ENST00000555773 TEX28O15482 410 aa13.25□□□□□ -0.29
SHMT2-221ENST00000555773 ATP2C2O75185 946 aa13.25□□□□□ -0.29
SHMT2-221ENST00000555773 ABLIM3O94929 683 aa13.25□□□□□ -0.29
SHMT2-221ENST00000555773 ADH1AP07327 375 aa13.25□□□□□ -0.29
SHMT2-221ENST00000555773 CNPP09543 421 aaKnown RBP13.25□□□□□ -0.29
SHMT2-221ENST00000555773 CD19P15391 556 aa13.25□□□□□ -0.29
SHMT2-221ENST00000555773 CYP11B1P15538 503 aa13.25□□□□□ -0.29
SHMT2-221ENST00000555773 GNA15P30679 374 aa13.25□□□□□ -0.29
SHMT2-221ENST00000555773 PRKCIP41743 596 aa13.25□□□□□ -0.29
SHMT2-221ENST00000555773 ADKP55263 362 aaKnown RBP13.25□□□□□ -0.29
SHMT2-221ENST00000555773 ASIC2Q16515 512 aa13.25□□□□□ -0.29
SHMT2-221ENST00000555773 RSPO2Q6UXX9 243 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-221ENST00000555773 C4orf50Q6ZRC1 276 aa13.25□□□□□ -0.29
SHMT2-221ENST00000555773 LRRTM3Q86VH5 581 aa13.25□□□□□ -0.29
SHMT2-221ENST00000555773 ZNF461Q8TAF7 563 aa13.25□□□□□ -0.29
SHMT2-221ENST00000555773 ZNF606Q8WXB4 792 aa13.25□□□□□ -0.29
SHMT2-221ENST00000555773 AUTS2Q8WXX7 1259 aa13.25□□□□□ -0.29
SHMT2-221ENST00000555773 MRPL38Q96DV4 380 aaKnown RBP13.25□□□□□ -0.29
SHMT2-221ENST00000555773 CYFIP2Q96F07 1278 aa13.25□□□□□ -0.29
SHMT2-221ENST00000555773 FUBP3Q96I24 572 aaKnown RBP eCLIP13.25□□□□□ -0.29
SHMT2-221ENST00000555773 KLHL5Q96PQ7 755 aa13.25□□□□□ -0.29
SHMT2-221ENST00000555773 PANX2Q96RD6 677 aa13.25□□□□□ -0.29
SHMT2-221ENST00000555773 HNRNPABQ99729 332 aaKnown RBP13.25□□□□□ -0.29
SHMT2-221ENST00000555773 DPEP3Q9H4B8 488 aa13.25□□□□□ -0.29
SHMT2-221ENST00000555773 CRTAC1Q9NQ79 661 aa13.25□□□□□ -0.29
SHMT2-221ENST00000555773 ABHD10Q9NUJ1 306 aa13.25□□□□□ -0.29
SHMT2-221ENST00000555773 HSFX1Q9UBD0 423 aa13.25□□□□□ -0.29
SHMT2-221ENST00000555773 AFF4Q9UHB7 1163 aaKnown RBP13.25□□□□□ -0.29
SHMT2-221ENST00000555773 GTF3C4Q9UKN8 822 aa13.25□□□□□ -0.29
SHMT2-221ENST00000555773 EPOPA6NHQ4 379 aa13.24□□□□□ -0.29
SHMT2-221ENST00000555773 HIDE1A8MVS5 230 aa13.24□□□□□ -0.29
SHMT2-221ENST00000555773 HCRTO43612 131 aa13.24□□□□□ -0.29
SHMT2-221ENST00000555773 SERPING1P05155 500 aa13.24□□□□□ -0.29
SHMT2-221ENST00000555773 PNMA6AP0CW24 399 aaPredicted RBP13.24□□□□□ -0.29
SHMT2-221ENST00000555773 CPB1P15086 417 aa13.24□□□□□ -0.29
SHMT2-221ENST00000555773 RPL17P18621 184 aaKnown RBP13.24□□□□□ -0.29
SHMT2-221ENST00000555773 KLRC2P26717 231 aa13.24□□□□□ -0.29
SHMT2-221ENST00000555773 CA8P35219 290 aa13.24□□□□□ -0.29
SHMT2-221ENST00000555773 IRS1P35568 1242 aa13.24□□□□□ -0.29
SHMT2-221ENST00000555773 PDE6CP51160 858 aa13.24□□□□□ -0.29
SHMT2-221ENST00000555773 ARPP19P56211 112 aa13.24□□□□□ -0.29
SHMT2-221ENST00000555773 PSMC1P62191 440 aaKnown RBP13.24□□□□□ -0.29
SHMT2-221ENST00000555773 CDK17Q00537 523 aa13.24□□□□□ -0.29
SHMT2-221ENST00000555773 ARID5AQ03989 594 aa13.24□□□□□ -0.29
SHMT2-221ENST00000555773 KLHL30Q0D2K2 578 aa13.24□□□□□ -0.29
SHMT2-221ENST00000555773 ORC1Q13415 861 aa13.24□□□□□ -0.29
SHMT2-221ENST00000555773 MEA1Q16626 185 aa13.24□□□□□ -0.29
SHMT2-221ENST00000555773 CFAP221Q4G0U5 840 aa13.24□□□□□ -0.29
SHMT2-221ENST00000555773 SLC39A12Q504Y0 691 aa13.24□□□□□ -0.29
SHMT2-221ENST00000555773 MDH1BQ5I0G3 518 aa13.24□□□□□ -0.29
SHMT2-221ENST00000555773 ZNF697Q5TEC3 545 aa13.24□□□□□ -0.29
SHMT2-221ENST00000555773 PLPP4Q5VZY2 271 aa13.24□□□□□ -0.29
SHMT2-221ENST00000555773 LCLAT1Q6UWP7 414 aa13.24□□□□□ -0.29
SHMT2-221ENST00000555773 SLC47A2Q86VL8 602 aa13.24□□□□□ -0.29
SHMT2-221ENST00000555773 C12orf29Q8N999 325 aa13.24□□□□□ -0.29
SHMT2-221ENST00000555773 TC2NQ8N9U0 490 aa13.24□□□□□ -0.29
SHMT2-221ENST00000555773 SPPL2BQ8TCT7 592 aa13.24□□□□□ -0.29
SHMT2-221ENST00000555773 GDPD5Q8WTR4 605 aa13.24□□□□□ -0.29
SHMT2-221ENST00000555773 PPP2R3CQ969Q6 453 aa13.24□□□□□ -0.29
SHMT2-221ENST00000555773 PDLIM2Q96JY6 352 aa13.24□□□□□ -0.29
SHMT2-221ENST00000555773 TMEM209Q96SK2 561 aa13.24□□□□□ -0.29
SHMT2-221ENST00000555773 TTYH1Q9H313 450 aaPredicted RBP13.24□□□□□ -0.29
SHMT2-221ENST00000555773 ABCB6Q9NP58 842 aa13.24□□□□□ -0.29
SHMT2-221ENST00000555773 PCDHB5Q9Y5E4 795 aa13.24□□□□□ -0.29
SHMT2-221ENST00000555773 ATP8B3O60423 1300 aa13.23□□□□□ -0.29
SHMT2-221ENST00000555773 RFXAPO00287 272 aa13.23□□□□□ -0.29
SHMT2-221ENST00000555773 O00370 1275 aa13.23□□□□□ -0.29
SHMT2-221ENST00000555773 SOX1O00570 391 aaPredicted RBP13.23□□□□□ -0.29
SHMT2-221ENST00000555773 ADAM12O43184 909 aa13.23□□□□□ -0.29
SHMT2-221ENST00000555773 THAP12O43422 761 aa13.23□□□□□ -0.29
SHMT2-221ENST00000555773 ATF2P15336 505 aa13.23□□□□□ -0.29
SHMT2-221ENST00000555773 POU3F3P20264 500 aaPredicted RBP13.23□□□□□ -0.29
SHMT2-221ENST00000555773 ANXA13P27216 316 aa13.23□□□□□ -0.29
SHMT2-221ENST00000555773 CDR2Q01850 454 aa13.23□□□□□ -0.29
SHMT2-221ENST00000555773 ROR1Q01973 937 aa13.23□□□□□ -0.29
SHMT2-221ENST00000555773 PPP1R26Q5T8A7 1209 aaPredicted RBP13.23□□□□□ -0.29
SHMT2-221ENST00000555773 LILRA6Q6PI73 481 aa13.23□□□□□ -0.29
SHMT2-221ENST00000555773 VSTM1Q6UX27 236 aa13.23□□□□□ -0.29
SHMT2-221ENST00000555773 RTL10Q7L3V2 364 aa13.23□□□□□ -0.29
SHMT2-221ENST00000555773 SPATA2LQ8IUW3 424 aaPredicted RBP13.23□□□□□ -0.29
SHMT2-221ENST00000555773 FUKQ8N0W3 1084 aa13.23□□□□□ -0.29
SHMT2-221ENST00000555773 ANKRD52Q8NB46 1076 aa13.23□□□□□ -0.29
SHMT2-221ENST00000555773 EPS8L1Q8TE68 723 aa13.23□□□□□ -0.29
SHMT2-221ENST00000555773 TFAP2BQ92481 460 aa13.23□□□□□ -0.29
SHMT2-221ENST00000555773 DDX1Q92499 740 aaKnown RBP13.23□□□□□ -0.29
SHMT2-221ENST00000555773 PCED1BQ96HM7 432 aa13.23□□□□□ -0.29
SHMT2-221ENST00000555773 CDCA3Q99618 268 aaPredicted RBP13.23□□□□□ -0.29
SHMT2-221ENST00000555773 B3GNT5Q9BYG0 378 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms