RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 ATICP31939 592 aa12.56□□□□□ -0.4
MTHFD1-211ENST00000555709 TRPC3Q13507 836 aa12.56□□□□□ -0.4
MTHFD1-211ENST00000555709 TRIM14Q14142 442 aa12.56□□□□□ -0.4
MTHFD1-211ENST00000555709 SGSM1Q2NKQ1 1148 aa12.56□□□□□ -0.4
MTHFD1-211ENST00000555709 ZNF699Q32M78 642 aa12.56□□□□□ -0.4
MTHFD1-211ENST00000555709 SPOPLQ6IQ16 392 aa12.56□□□□□ -0.4
MTHFD1-211ENST00000555709 PHLDB3Q6NSJ2 640 aa12.56□□□□□ -0.4
MTHFD1-211ENST00000555709 GJB7Q6PEY0 223 aa12.56□□□□□ -0.4
MTHFD1-211ENST00000555709 ZNF280BQ86YH2 543 aa12.56□□□□□ -0.4
MTHFD1-211ENST00000555709 C1orf210Q8IVY1 113 aa12.56□□□□□ -0.4
MTHFD1-211ENST00000555709 ARHGEF19Q8IW93 802 aa12.56□□□□□ -0.4
MTHFD1-211ENST00000555709 COLGALT2Q8IYK4 626 aa12.56□□□□□ -0.4
MTHFD1-211ENST00000555709 C12orf76Q8N812 135 aaPredicted RBP12.56□□□□□ -0.4
MTHFD1-211ENST00000555709 NEK11Q8NG66 645 aa12.56□□□□□ -0.4
MTHFD1-211ENST00000555709 ELMO3Q96BJ8 720 aa12.56□□□□□ -0.4
MTHFD1-211ENST00000555709 IQCDQ96DY2 449 aa12.56□□□□□ -0.4
MTHFD1-211ENST00000555709 UROC1Q96N76 676 aa12.56□□□□□ -0.4
MTHFD1-211ENST00000555709 NT5C1BQ96P26 610 aa12.56□□□□□ -0.4
MTHFD1-211ENST00000555709 KCNK12Q9HB15 430 aa12.56□□□□□ -0.4
MTHFD1-211ENST00000555709 NGRNQ9NPE2 291 aaKnown RBP12.56□□□□□ -0.4
MTHFD1-211ENST00000555709 NCDNQ9UBB6 729 aa12.56□□□□□ -0.4
MTHFD1-211ENST00000555709 WNT16Q9UBV4 365 aa12.56□□□□□ -0.4
MTHFD1-211ENST00000555709 AGAP1Q9UPQ3 857 aa12.56□□□□□ -0.4
MTHFD1-211ENST00000555709 DAAM1Q9Y4D1 1078 aa12.56□□□□□ -0.4
MTHFD1-211ENST00000555709 NUB1Q9Y5A7 615 aa12.56□□□□□ -0.4
MTHFD1-211ENST00000555709 FHOD1Q9Y613 1164 aa12.56□□□□□ -0.4
MTHFD1-211ENST00000555709 CNOT1A5YKK6 2376 aaKnown RBP12.55□□□□□ -0.4
MTHFD1-211ENST00000555709 A0A1W2PQJ5 194 aa12.55□□□□□ -0.4
MTHFD1-211ENST00000555709 CASTOR2A6NHX0 329 aa12.55□□□□□ -0.4
MTHFD1-211ENST00000555709 PODXLO00592 558 aa12.55□□□□□ -0.4
MTHFD1-211ENST00000555709 TRIM21P19474 475 aaKnown RBP12.55□□□□□ -0.4
MTHFD1-211ENST00000555709 RPL9P32969 192 aaKnown RBP12.55□□□□□ -0.4
MTHFD1-211ENST00000555709 PNPLA4P41247 253 aa12.55□□□□□ -0.4
MTHFD1-211ENST00000555709 ASPAP45381 313 aa12.55□□□□□ -0.4
MTHFD1-211ENST00000555709 CLCNKBP51801 687 aa12.55□□□□□ -0.4
MTHFD1-211ENST00000555709 GCNT1Q02742 428 aa12.55□□□□□ -0.4
MTHFD1-211ENST00000555709 LRMPQ12912 555 aa12.55□□□□□ -0.4
MTHFD1-211ENST00000555709 UPP1Q16831 310 aa12.55□□□□□ -0.4
MTHFD1-211ENST00000555709 ATAT1Q5SQI0 421 aa12.55□□□□□ -0.4
MTHFD1-211ENST00000555709 RARS2Q5T160 578 aaKnown RBP12.55□□□□□ -0.4
MTHFD1-211ENST00000555709 IQCEQ6IPM2 695 aa12.55□□□□□ -0.4
MTHFD1-211ENST00000555709 C3orf58Q8NDZ4 430 aa12.55□□□□□ -0.4
MTHFD1-211ENST00000555709 BAP1Q92560 729 aa12.55□□□□□ -0.4
MTHFD1-211ENST00000555709 ANP32BQ92688 251 aaKnown RBP12.55□□□□□ -0.4
MTHFD1-211ENST00000555709 HPDLQ96IR7 371 aa12.55□□□□□ -0.4
MTHFD1-211ENST00000555709 PCMTD1Q96MG8 357 aaPredicted RBP12.55□□□□□ -0.4
MTHFD1-211ENST00000555709 ZNF560Q96MR9 790 aa12.55□□□□□ -0.4
MTHFD1-211ENST00000555709 KREMEN1Q96MU8 473 aa12.55□□□□□ -0.4
MTHFD1-211ENST00000555709 PAAF1Q9BRP4 392 aa12.55□□□□□ -0.4
MTHFD1-211ENST00000555709 NUP58Q9BVL2 599 aa12.55□□□□□ -0.4
MTHFD1-211ENST00000555709 IMPG2Q9BZV3 1241 aa12.55□□□□□ -0.4
MTHFD1-211ENST00000555709 NIF3L1Q9GZT8 377 aa12.55□□□□□ -0.4
MTHFD1-211ENST00000555709 CWH43Q9H720 699 aa12.55□□□□□ -0.4
MTHFD1-211ENST00000555709 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.55□□□□□ -0.4
MTHFD1-211ENST00000555709 ENTPD7Q9NQZ7 604 aa12.55□□□□□ -0.4
MTHFD1-211ENST00000555709 CEP72Q9P209 647 aa12.55□□□□□ -0.4
MTHFD1-211ENST00000555709 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.55□□□□□ -0.4
MTHFD1-211ENST00000555709 TMEM189-UBE2V1I3L0A0 370 aa12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 RNF225M0QZC1 329 aaPredicted RBP12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 SPTLC1O15269 473 aa12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 CLASP2O75122 1294 aaKnown RBP12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 KIF4AO95239 1232 aa12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 DCNP07585 359 aaKnown RBP12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 IGFBP6P24592 240 aaPredicted RBP12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 AARSP49588 968 aaKnown RBP eCLIP12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 TAF6P49848 677 aa12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 JAM2P57087 298 aa12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 POLR2FP61218 127 aaKnown RBP12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 RNASELQ05823 741 aaKnown RBP12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 CUL2Q13617 745 aa12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 ARID5BQ14865 1188 aa12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 PPM1JQ5JR12 505 aa12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 WDR44Q5JSH3 913 aa12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 SPOUT1Q5T280 376 aaKnown RBP12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 CD300LGQ6UXG3 332 aa12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 UBR7Q8N806 425 aa12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 MRPL43Q8N983 215 aaKnown RBP12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 SPC24Q8NBT2 197 aa12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 CCDC150Q8NCX0 1101 aa12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 KAT5Q92993 513 aa12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 TATDN2Q93075 761 aa12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 DDX27Q96GQ7 796 aaKnown RBP12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 FAXDC2Q96IV6 333 aa12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 PPP1R9BQ96SB3 815 aa12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 ARID3AQ99856 593 aa12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 BCO2Q9BYV7 579 aa12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 EDEM3Q9BZQ6 932 aa12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 GPR88Q9GZN0 384 aa12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 NRDE2Q9H7Z3 1164 aa12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 TBC1D17Q9HA65 648 aa12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 IMPACTQ9P2X3 320 aa12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 DNAJB4Q9UDY4 337 aa12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 CAPN11Q9UMQ6 739 aa12.54□□□□□ -0.4
MTHFD1-211ENST00000555709 VWA8A3KMH1 1905 aa12.53□□□□□ -0.4
MTHFD1-211ENST00000555709 C2orf71A6NGG8 1288 aa12.53□□□□□ -0.4
MTHFD1-211ENST00000555709 F8VZ95 297 aa12.53□□□□□ -0.4
MTHFD1-211ENST00000555709 F8W810 466 aa12.53□□□□□ -0.4
MTHFD1-211ENST00000555709 STK25O00506 426 aa12.53□□□□□ -0.4
MTHFD1-211ENST00000555709 MFAP3LO75121 409 aa12.53□□□□□ -0.4
MTHFD1-211ENST00000555709 CFHP08603 1231 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms