RNA–Protein interactions for RNA: ENST00000555561.5

SDR39U1-213, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 452 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-213ENST00000555561 VPS18Q9P253 973 aa12.2□□□□□ -0.46
SDR39U1-213ENST00000555561 NXF1Q9UBU9 619 aaKnown RBP12.2□□□□□ -0.46
SDR39U1-213ENST00000555561 HESX1Q9UBX0 185 aa12.2□□□□□ -0.46
SDR39U1-213ENST00000555561 GJD2Q9UKL4 321 aa12.2□□□□□ -0.46
SDR39U1-213ENST00000555561 AGAP1Q9UPQ3 857 aa12.2□□□□□ -0.46
SDR39U1-213ENST00000555561 DRG1Q9Y295 367 aaKnown RBP12.2□□□□□ -0.46
SDR39U1-213ENST00000555561 SQORQ9Y6N5 450 aa12.2□□□□□ -0.46
SDR39U1-213ENST00000555561 ARHGEF37A1IGU5 675 aa12.19□□□□□ -0.46
SDR39U1-213ENST00000555561 O00370 1275 aa12.19□□□□□ -0.46
SDR39U1-213ENST00000555561 CABYRO75952 493 aa12.19□□□□□ -0.46
SDR39U1-213ENST00000555561 IVLP07476 585 aa12.19□□□□□ -0.46
SDR39U1-213ENST00000555561 GJB1P08034 283 aa12.19□□□□□ -0.46
SDR39U1-213ENST00000555561 SKIP12755 728 aa12.19□□□□□ -0.46
SDR39U1-213ENST00000555561 ITGA4P13612 1032 aa12.19□□□□□ -0.46
SDR39U1-213ENST00000555561 RARGP13631 454 aa12.19□□□□□ -0.46
SDR39U1-213ENST00000555561 BRD2P25440 801 aaKnown RBP12.19□□□□□ -0.46
SDR39U1-213ENST00000555561 ECHS1P30084 290 aa12.19□□□□□ -0.46
SDR39U1-213ENST00000555561 HOXA11P31270 313 aaPredicted RBP12.19□□□□□ -0.46
SDR39U1-213ENST00000555561 PTGIRP43119 386 aa12.19□□□□□ -0.46
SDR39U1-213ENST00000555561 RAB27AP51159 221 aa12.19□□□□□ -0.46
SDR39U1-213ENST00000555561 RNASE9P60153 205 aaKnown RBP12.19□□□□□ -0.46
SDR39U1-213ENST00000555561 OSTNP61366 133 aa12.19□□□□□ -0.46
SDR39U1-213ENST00000555561 PURAQ00577 322 aaKnown RBP12.19□□□□□ -0.46
SDR39U1-213ENST00000555561 NFX1Q12986 1120 aaKnown RBP12.19□□□□□ -0.46
SDR39U1-213ENST00000555561 MKRN3Q13064 507 aaKnown RBP12.19□□□□□ -0.46
SDR39U1-213ENST00000555561 SNX17Q15036 470 aa12.19□□□□□ -0.46
SDR39U1-213ENST00000555561 PPP1R7Q15435 360 aa12.19□□□□□ -0.46
SDR39U1-213ENST00000555561 SIX1Q15475 284 aaPredicted RBP12.19□□□□□ -0.46
SDR39U1-213ENST00000555561 LEKR1Q6ZMV7 388 aa12.19□□□□□ -0.46
SDR39U1-213ENST00000555561 DNAAF5Q86Y56 855 aa12.19□□□□□ -0.46
SDR39U1-213ENST00000555561 RELL1Q8IUW5 271 aa12.19□□□□□ -0.46
SDR39U1-213ENST00000555561 TNIP3Q96KP6 325 aa12.19□□□□□ -0.46
SDR39U1-213ENST00000555561 TBCBQ99426 244 aa12.19□□□□□ -0.46
SDR39U1-213ENST00000555561 TRAIPQ9BWF2 469 aa12.19□□□□□ -0.46
SDR39U1-213ENST00000555561 OSBPL8Q9BZF1 889 aa12.19□□□□□ -0.46
SDR39U1-213ENST00000555561 PABPC3Q9H361 631 aaKnown RBP12.19□□□□□ -0.46
SDR39U1-213ENST00000555561 CWC15Q9P013 229 aaKnown RBP12.19□□□□□ -0.46
SDR39U1-213ENST00000555561 AGPSO00116 658 aa12.18□□□□□ -0.46
SDR39U1-213ENST00000555561 DAPK3O43293 454 aa12.18□□□□□ -0.46
SDR39U1-213ENST00000555561 NPTXRO95502 500 aa12.18□□□□□ -0.46
SDR39U1-213ENST00000555561 GNRH1P01148 92 aa12.18□□□□□ -0.46
SDR39U1-213ENST00000555561 RARAP10276 462 aa12.18□□□□□ -0.46
SDR39U1-213ENST00000555561 CST5P28325 142 aaPredicted RBP12.18□□□□□ -0.46
SDR39U1-213ENST00000555561 ATP5DP30049 168 aa12.18□□□□□ -0.46
SDR39U1-213ENST00000555561 LRPAP1P30533 357 aa12.18□□□□□ -0.46
SDR39U1-213ENST00000555561 SLC8A3P57103 927 aa12.18□□□□□ -0.46
SDR39U1-213ENST00000555561 SKOR1P84550 965 aa12.18□□□□□ -0.46
SDR39U1-213ENST00000555561 ZNF211Q13398 564 aaPredicted RBP12.18□□□□□ -0.46
SDR39U1-213ENST00000555561 KIZQ2M2Z5 673 aa12.18□□□□□ -0.46
SDR39U1-213ENST00000555561 FBXO47Q5MNV8 452 aa12.18□□□□□ -0.46
SDR39U1-213ENST00000555561 ZNF365Q70YC5 407 aa12.18□□□□□ -0.46
SDR39U1-213ENST00000555561 PCGF5Q86SE9 256 aa12.18□□□□□ -0.46
SDR39U1-213ENST00000555561 CCDC50Q8IVM0 306 aa12.18□□□□□ -0.46
SDR39U1-213ENST00000555561 MAP7D3Q8IWC1 876 aa12.18□□□□□ -0.46
SDR39U1-213ENST00000555561 CRYBG2Q8N1P7 616 aa12.18□□□□□ -0.46
SDR39U1-213ENST00000555561 ART4Q93070 314 aa12.18□□□□□ -0.46
SDR39U1-213ENST00000555561 NKD2Q969F2 451 aaPredicted RBP12.18□□□□□ -0.46
SDR39U1-213ENST00000555561 SNF8Q96H20 258 aa12.18□□□□□ -0.46
SDR39U1-213ENST00000555561 CPB2Q96IY4 423 aa12.18□□□□□ -0.46
SDR39U1-213ENST00000555561 ZIM3Q96PE6 472 aa12.18□□□□□ -0.46
SDR39U1-213ENST00000555561 CFHR5Q9BXR6 569 aa12.18□□□□□ -0.46
SDR39U1-213ENST00000555561 ROPN1BQ9BZX4 212 aaPredicted RBP12.18□□□□□ -0.46
SDR39U1-213ENST00000555561 DCLK3Q9C098 648 aa12.18□□□□□ -0.46
SDR39U1-213ENST00000555561 FAM204AQ9H8W3 233 aa12.18□□□□□ -0.46
SDR39U1-213ENST00000555561 ROPN1Q9HAT0 212 aaPredicted RBP12.18□□□□□ -0.46
SDR39U1-213ENST00000555561 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.18□□□□□ -0.46
SDR39U1-213ENST00000555561 ZDHHC18Q9NUE0 388 aa12.18□□□□□ -0.46
SDR39U1-213ENST00000555561 FAN1Q9Y2M0 1017 aa12.18□□□□□ -0.46
SDR39U1-213ENST00000555561 DPYSL4O14531 572 aa12.17□□□□□ -0.46
SDR39U1-213ENST00000555561 POLR3GO15318 223 aaPredicted RBP12.17□□□□□ -0.46
SDR39U1-213ENST00000555561 SEPT4O43236 478 aa12.17□□□□□ -0.46
SDR39U1-213ENST00000555561 MYL3P08590 195 aa12.17□□□□□ -0.46
SDR39U1-213ENST00000555561 CYBAP13498 195 aa12.17□□□□□ -0.46
SDR39U1-213ENST00000555561 HSD17B3P37058 310 aa12.17□□□□□ -0.46
SDR39U1-213ENST00000555561 GPD2P43304 727 aa12.17□□□□□ -0.46
SDR39U1-213ENST00000555561 MARCKSL1P49006 195 aa12.17□□□□□ -0.46
SDR39U1-213ENST00000555561 RGS19P49795 217 aa12.17□□□□□ -0.46
SDR39U1-213ENST00000555561 TAF6P49848 677 aa12.17□□□□□ -0.46
SDR39U1-213ENST00000555561 BCAT1P54687 386 aa12.17□□□□□ -0.46
SDR39U1-213ENST00000555561 PSMC1P62191 440 aaKnown RBP12.17□□□□□ -0.46
SDR39U1-213ENST00000555561 ADCY2Q08462 1091 aa12.17□□□□□ -0.46
SDR39U1-213ENST00000555561 PDCLQ13371 301 aa12.17□□□□□ -0.46
SDR39U1-213ENST00000555561 PTPN20Q4JDL3 420 aa12.17□□□□□ -0.46
SDR39U1-213ENST00000555561 FAM47CQ5HY64 1035 aa12.17□□□□□ -0.46
SDR39U1-213ENST00000555561 TMEM63BQ5T3F8 832 aa12.17□□□□□ -0.46
SDR39U1-213ENST00000555561 C4orf22Q6V702 233 aa12.17□□□□□ -0.46
SDR39U1-213ENST00000555561 SCARA5Q6ZMJ2 495 aa12.17□□□□□ -0.46
SDR39U1-213ENST00000555561 LIMS2Q7Z4I7 341 aa12.17□□□□□ -0.46
SDR39U1-213ENST00000555561 PASD1Q8IV76 773 aa12.17□□□□□ -0.46
SDR39U1-213ENST00000555561 TOP6BLQ8N6T0 577 aa12.17□□□□□ -0.46
SDR39U1-213ENST00000555561 PCSK9Q8NBP7 692 aaKnown RBP12.17□□□□□ -0.46
SDR39U1-213ENST00000555561 TEKT4Q8WW24 435 aa12.17□□□□□ -0.46
SDR39U1-213ENST00000555561 TFAP2BQ92481 460 aa12.17□□□□□ -0.46
SDR39U1-213ENST00000555561 ATP6V1G3Q96LB4 118 aa12.17□□□□□ -0.46
SDR39U1-213ENST00000555561 HSFY1Q96LI6 401 aa12.17□□□□□ -0.46
SDR39U1-213ENST00000555561 MCEEQ96PE7 176 aa12.17□□□□□ -0.46
SDR39U1-213ENST00000555561 CNPY3Q9BT09 278 aa12.17□□□□□ -0.46
SDR39U1-213ENST00000555561 TXLNGYQ9BZA5 131 aa12.17□□□□□ -0.46
SDR39U1-213ENST00000555561 CELF4Q9BZC1 486 aaKnown RBP12.17□□□□□ -0.46
SDR39U1-213ENST00000555561 CNOT10Q9H9A5 744 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms