RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 SEMA4DQ92854 862 aa10.54□□□□□ -0.72
PSEN1-213ENST00000555386 CARD6Q9BX69 1037 aa10.54□□□□□ -0.72
PSEN1-213ENST00000555386 HAUS4Q9H6D7 363 aa10.54□□□□□ -0.72
PSEN1-213ENST00000555386 LZTFL1Q9NQ48 299 aa10.54□□□□□ -0.72
PSEN1-213ENST00000555386 ZNHIT6Q9NWK9 470 aaKnown RBP10.54□□□□□ -0.72
PSEN1-213ENST00000555386 FAM53CQ9NYF3 392 aa10.54□□□□□ -0.72
PSEN1-213ENST00000555386 STK39Q9UEW8 545 aa10.54□□□□□ -0.72
PSEN1-213ENST00000555386 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.54□□□□□ -0.72
PSEN1-213ENST00000555386 L1RE1Q9UN81 338 aa10.54□□□□□ -0.72
PSEN1-213ENST00000555386 SSX2IPQ9Y2D8 614 aa10.54□□□□□ -0.72
PSEN1-213ENST00000555386 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.54□□□□□ -0.72
PSEN1-213ENST00000555386 EPN1Q9Y6I3 576 aaPredicted RBP10.54□□□□□ -0.72
PSEN1-213ENST00000555386 V9GYY5 206 aaPredicted RBP10.54□□□□□ -0.72
PSEN1-213ENST00000555386 TCF20Q9UGU0 1960 aaKnown RBP10.53□□□□□ -0.72
PSEN1-213ENST00000555386 H3BQ06 376 aaPredicted RBP10.53□□□□□ -0.72
PSEN1-213ENST00000555386 RNF225M0QZC1 329 aaPredicted RBP10.53□□□□□ -0.72
PSEN1-213ENST00000555386 SYN3O14994 580 aa10.53□□□□□ -0.72
PSEN1-213ENST00000555386 HCRTO43612 131 aa10.53□□□□□ -0.72
PSEN1-213ENST00000555386 LILRB3O75022 631 aa10.53□□□□□ -0.72
PSEN1-213ENST00000555386 ADH1AP07327 375 aa10.53□□□□□ -0.72
PSEN1-213ENST00000555386 PDGFRBP09619 1106 aa10.53□□□□□ -0.72
PSEN1-213ENST00000555386 CPB1P15086 417 aa10.53□□□□□ -0.72
PSEN1-213ENST00000555386 POU3F3P20264 500 aaPredicted RBP10.53□□□□□ -0.72
PSEN1-213ENST00000555386 CYLC1P35663 651 aaPredicted RBP10.53□□□□□ -0.72
PSEN1-213ENST00000555386 FMO5P49326 533 aa10.53□□□□□ -0.72
PSEN1-213ENST00000555386 AARSP49588 968 aaKnown RBP eCLIP10.53□□□□□ -0.72
PSEN1-213ENST00000555386 CLDN10P78369 228 aa10.53□□□□□ -0.72
PSEN1-213ENST00000555386 KCNH2Q12809 1159 aa10.53□□□□□ -0.72
PSEN1-213ENST00000555386 DUSP6Q16828 381 aa10.53□□□□□ -0.72
PSEN1-213ENST00000555386 ZNF667Q5HYK9 610 aa10.53□□□□□ -0.72
PSEN1-213ENST00000555386 MIIPQ5JXC2 388 aa10.53□□□□□ -0.72
PSEN1-213ENST00000555386 ZNF280DQ6N043 979 aa10.53□□□□□ -0.72
PSEN1-213ENST00000555386 ADGRF2Q8IZF7 708 aa10.53□□□□□ -0.72
PSEN1-213ENST00000555386 EHBP1Q8NDI1 1231 aa10.53□□□□□ -0.72
PSEN1-213ENST00000555386 GOLGA1Q92805 767 aa10.53□□□□□ -0.72
PSEN1-213ENST00000555386 SLC35C1Q96A29 364 aa10.53□□□□□ -0.72
PSEN1-213ENST00000555386 PGLYRP2Q96PD5 576 aa10.53□□□□□ -0.72
PSEN1-213ENST00000555386 TMEM209Q96SK2 561 aa10.53□□□□□ -0.72
PSEN1-213ENST00000555386 CLSTN3Q9BQT9 956 aa10.53□□□□□ -0.72
PSEN1-213ENST00000555386 EDEM3Q9BZQ6 932 aa10.53□□□□□ -0.72
PSEN1-213ENST00000555386 IMPG2Q9BZV3 1241 aa10.53□□□□□ -0.72
PSEN1-213ENST00000555386 SMYD3Q9H7B4 428 aa10.53□□□□□ -0.72
PSEN1-213ENST00000555386 CDC23Q9UJX2 597 aa10.53□□□□□ -0.72
PSEN1-213ENST00000555386 FBXL5Q9UKA1 691 aa10.53□□□□□ -0.72
PSEN1-213ENST00000555386 BARX2Q9UMQ3 279 aaPredicted RBP10.53□□□□□ -0.72
PSEN1-213ENST00000555386 A0A0C4DFX4 3053 aa10.53□□□□□ -0.72
PSEN1-213ENST00000555386 ARHGEF37A1IGU5 675 aa10.52□□□□□ -0.73
PSEN1-213ENST00000555386 H7C4K7 107 aa10.52□□□□□ -0.73
PSEN1-213ENST00000555386 AFPP02771 609 aaKnown RBP10.52□□□□□ -0.73
PSEN1-213ENST00000555386 TRIM21P19474 475 aaKnown RBP10.52□□□□□ -0.73
PSEN1-213ENST00000555386 KCNA5P22460 613 aa10.52□□□□□ -0.73
PSEN1-213ENST00000555386 HNRNPH3P31942 346 aaKnown RBP10.52□□□□□ -0.73
PSEN1-213ENST00000555386 GTF2H1P32780 548 aa10.52□□□□□ -0.73
PSEN1-213ENST00000555386 ARHGAP25P42331 645 aa10.52□□□□□ -0.73
PSEN1-213ENST00000555386 CDH8P55286 799 aa10.52□□□□□ -0.73
PSEN1-213ENST00000555386 DLX2Q07687 328 aaPredicted RBP10.52□□□□□ -0.73
PSEN1-213ENST00000555386 ORC1Q13415 861 aa10.52□□□□□ -0.73
PSEN1-213ENST00000555386 MAN2A1Q16706 1144 aa10.52□□□□□ -0.73
PSEN1-213ENST00000555386 WHAMMP3Q1A5X7 153 aa10.52□□□□□ -0.73
PSEN1-213ENST00000555386 SOWAHAQ2M3V2 549 aa10.52□□□□□ -0.73
PSEN1-213ENST00000555386 SGSM1Q2NKQ1 1148 aa10.52□□□□□ -0.73
PSEN1-213ENST00000555386 VWA3BQ502W6 1294 aa10.52□□□□□ -0.73
PSEN1-213ENST00000555386 ZNF569Q5MCW4 686 aa10.52□□□□□ -0.73
PSEN1-213ENST00000555386 PDXDC1Q6P996 788 aa10.52□□□□□ -0.73
PSEN1-213ENST00000555386 C15orf39Q6ZRI6 1047 aa10.52□□□□□ -0.73
PSEN1-213ENST00000555386 OSTM1Q86WC4 334 aa10.52□□□□□ -0.73
PSEN1-213ENST00000555386 TRIM59Q8IWR1 403 aa10.52□□□□□ -0.73
PSEN1-213ENST00000555386 KRT222Q8N1A0 295 aa10.52□□□□□ -0.73
PSEN1-213ENST00000555386 THEM5Q8N1Q8 247 aa10.52□□□□□ -0.73
PSEN1-213ENST00000555386 C12orf76Q8N812 135 aaPredicted RBP10.52□□□□□ -0.73
PSEN1-213ENST00000555386 LRRN4CLQ8ND94 238 aa10.52□□□□□ -0.73
PSEN1-213ENST00000555386 ACRBPQ8NEB7 543 aa10.52□□□□□ -0.73
PSEN1-213ENST00000555386 FBXL13Q8NEE6 735 aa10.52□□□□□ -0.73
PSEN1-213ENST00000555386 VN1R2Q8NFZ6 395 aa10.52□□□□□ -0.73
PSEN1-213ENST00000555386 OR6B3Q8NGW1 331 aa10.52□□□□□ -0.73
PSEN1-213ENST00000555386 NAPGQ99747 312 aaPredicted RBP10.52□□□□□ -0.73
PSEN1-213ENST00000555386 MRPL45Q9BRJ2 306 aaKnown RBP10.52□□□□□ -0.73
PSEN1-213ENST00000555386 CRACR2AQ9BSW2 395 aa10.52□□□□□ -0.73
PSEN1-213ENST00000555386 XYLT2Q9H1B5 865 aa10.52□□□□□ -0.73
PSEN1-213ENST00000555386 SNX25Q9H3E2 840 aa10.52□□□□□ -0.73
PSEN1-213ENST00000555386 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.52□□□□□ -0.73
PSEN1-213ENST00000555386 RAB20Q9NX57 234 aa10.52□□□□□ -0.73
PSEN1-213ENST00000555386 MTRRQ9UBK8 725 aa10.52□□□□□ -0.73
PSEN1-213ENST00000555386 DSEQ9UL01 958 aa10.52□□□□□ -0.73
PSEN1-213ENST00000555386 HCFC2Q9Y5Z7 792 aa10.52□□□□□ -0.73
PSEN1-213ENST00000555386 VCANP13611 3396 aa10.51□□□□□ -0.73
PSEN1-213ENST00000555386 EIF3CLB5ME19 914 aaKnown RBP10.51□□□□□ -0.73
PSEN1-213ENST00000555386 TGM5O43548 720 aa10.51□□□□□ -0.73
PSEN1-213ENST00000555386 IPO7O95373 1038 aaKnown RBP10.51□□□□□ -0.73
PSEN1-213ENST00000555386 GLP2RO95838 553 aa10.51□□□□□ -0.73
PSEN1-213ENST00000555386 GLUD1P00367 558 aa10.51□□□□□ -0.73
PSEN1-213ENST00000555386 TUBBP07437 444 aa10.51□□□□□ -0.73
PSEN1-213ENST00000555386 WEE2P0C1S8 567 aa10.51□□□□□ -0.73
PSEN1-213ENST00000555386 CD58P19256 250 aa10.51□□□□□ -0.73
PSEN1-213ENST00000555386 TYMPP19971 482 aa10.51□□□□□ -0.73
PSEN1-213ENST00000555386 ATICP31939 592 aa10.51□□□□□ -0.73
PSEN1-213ENST00000555386 CLCN4P51793 760 aa10.51□□□□□ -0.73
PSEN1-213ENST00000555386 PSMC1P62191 440 aaKnown RBP10.51□□□□□ -0.73
PSEN1-213ENST00000555386 NOP14P78316 857 aaKnown RBP10.51□□□□□ -0.73
PSEN1-213ENST00000555386 CREMQ03060 361 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms