RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 NOLC1Q14978 699 aaKnown RBP eCLIP6.31□□□□□ -1.4
ATXN3-230ENST00000554673 KCTD19Q17RG1 926 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-230ENST00000554673 XKR4Q5GH76 650 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 NKAPLQ5M9Q1 402 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 ATF7IP2Q5U623 682 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 MPZL3Q6UWV2 235 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 RRAGAQ7L523 313 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 KIAA0907Q7Z7F0 614 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-230ENST00000554673 C1orf127Q8N9H9 656 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 DEPTORQ8TB45 409 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 SLC7A3Q8WY07 619 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 C18orf25Q96B23 403 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-230ENST00000554673 TSG101Q99816 390 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 BAG1Q99933 345 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-230ENST00000554673 MTG1Q9BT17 334 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-230ENST00000554673 BCO2Q9BYV7 579 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 MTMR12Q9C0I1 747 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.31□□□□□ -1.41e-11■■■■□ 25.2
ATXN3-230ENST00000554673 NPHS2Q9NP85 383 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 SAGE1Q9NXZ1 904 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 AIPL1Q9NZN9 384 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 GCNT4Q9P109 453 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 ANKFY1Q9P2R3 1169 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 TJP2Q9UDY2 1190 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 TUBGCP4Q9UGJ1 667 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 ZNF232Q9UNY5 417 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 EFR3BQ9Y2G0 817 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 PPP2R2CQ9Y2T4 447 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 CDY2AQ9Y6F7 541 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 NRCAMQ92823 1304 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 FAM229AH3BQW9 127 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 TGFBR3LH3BV60 316 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 INO80B-WBP1J3KQ70 363 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 OGTO15294 1046 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 DKC1O60832 514 aaKnown RBP eCLIP6.3□□□□□ -1.4
ATXN3-230ENST00000554673 TOM1L1O75674 476 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 MICAL2O94851 1124 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 SGPL1O95470 568 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 EPB41P11171 864 aaKnown RBP6.3□□□□□ -1.4
ATXN3-230ENST00000554673 COL6A1P12109 1028 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 GRK4P32298 578 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 PRKCIP41743 596 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 ASPAP45381 313 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 RAP1GAPP47736 663 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 LIG4P49917 911 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 GATMP50440 423 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 CHMP4BP1P59074 171 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 MRPS6P82932 125 aaKnown RBP6.3□□□□□ -1.4
ATXN3-230ENST00000554673 ZBED6P86452 979 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 CDK17Q00537 523 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 PTP4A2Q12974 167 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 PWP1Q13610 501 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 KIF22Q14807 665 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 DRAP1Q14919 205 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-230ENST00000554673 PPP2R5AQ15172 486 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 TPD52L1Q16890 204 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-230ENST00000554673 PRRT3Q5FWE3 981 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 FBXO47Q5MNV8 452 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 ZNF618Q5T7W0 954 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 MFSD14CQ5VZR4 134 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 JADE1Q6IE81 842 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 OSTM1Q86WC4 334 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 FAM126BQ8IXS8 530 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 DRC7Q8IY82 874 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 THNSL1Q8IYQ7 743 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 SYCP3Q8IZU3 236 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 CCDC150Q8NCX0 1101 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 C3orf58Q8NDZ4 430 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 TTC16Q8NEE8 873 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 HNRNPLLQ8WVV9 542 aaKnown RBP6.3□□□□□ -1.4
ATXN3-230ENST00000554673 TFAP2BQ92481 460 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 SHC3Q92529 594 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 LPPQ93052 612 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 CCDC47Q96A33 483 aaKnown RBP6.3□□□□□ -1.4
ATXN3-230ENST00000554673 ARHGEF26Q96DR7 871 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 SNX27Q96L92 541 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 CGRRF1Q99675 332 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 PAAF1Q9BRP4 392 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 MSTO1Q9BUK6 570 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 MRPL4Q9BYD3 311 aaKnown RBP6.3□□□□□ -1.4
ATXN3-230ENST00000554673 TRIM55Q9BYV6 548 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 INO80BQ9C086 356 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-230ENST00000554673 WNT8AQ9H1J5 351 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 TMEM206Q9H813 350 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 GOLGA2P5Q9HBQ8 144 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 CEP72Q9P209 647 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 PRKAG3Q9UGI9 489 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 CHORDC1Q9UHD1 332 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-230ENST00000554673 CYTH4Q9UIA0 394 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 DNAJC12Q9UKB3 198 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 CNTN6Q9UQ52 1028 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 AKT3Q9Y243 479 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 TRIM17Q9Y577 477 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 PLXNA3P51805 1871 aa6.3□□□□□ -1.4
ATXN3-230ENST00000554673 C17orf102A2RUQ5 167 aa6.29□□□□□ -1.4
ATXN3-230ENST00000554673 MAGEB2O15479 319 aa6.29□□□□□ -1.4
ATXN3-230ENST00000554673 GAS2O43903 313 aaKnown RBP6.29□□□□□ -1.4
ATXN3-230ENST00000554673 NBNO60934 754 aa6.29□□□□□ -1.4
ATXN3-230ENST00000554673 GFPT2O94808 682 aa6.29□□□□□ -1.4
ATXN3-230ENST00000554673 NDUFA10O95299 355 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms