RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 IER2Q9BTL4 223 aa11.4□□□□□ -0.58
SHMT2-215ENST00000554656 SMG9Q9H0W8 520 aaKnown RBP11.4□□□□□ -0.58
SHMT2-215ENST00000554656 TNMDQ9H2S6 317 aa11.4□□□□□ -0.58
SHMT2-215ENST00000554656 ATXN3LQ9H3M9 355 aa11.4□□□□□ -0.58
SHMT2-215ENST00000554656 GTSE1Q9NYZ3 720 aa11.4□□□□□ -0.58
SHMT2-215ENST00000554656 TBC1D7Q9P0N9 293 aa11.4□□□□□ -0.58
SHMT2-215ENST00000554656 STK17AQ9UEE5 414 aa11.4□□□□□ -0.58
SHMT2-215ENST00000554656 USP25Q9UHP3 1055 aa11.4□□□□□ -0.58
SHMT2-215ENST00000554656 A0A1B0GVL5 298 aa11.39□□□□□ -0.59
SHMT2-215ENST00000554656 MYBPHLA2RUH7 354 aa11.39□□□□□ -0.59
SHMT2-215ENST00000554656 SPECC1L-ADORA2AF8WAN1 911 aa11.39□□□□□ -0.59
SHMT2-215ENST00000554656 K7ESF4 209 aa11.39□□□□□ -0.59
SHMT2-215ENST00000554656 ZNF202O95125 648 aa11.39□□□□□ -0.59
SHMT2-215ENST00000554656 CAVIN2O95810 425 aa11.39□□□□□ -0.59
SHMT2-215ENST00000554656 HAPLN1P10915 354 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-215ENST00000554656 HMGA1P17096 107 aaKnown RBP11.39□□□□□ -0.59
SHMT2-215ENST00000554656 PAX3P23760 479 aa11.39□□□□□ -0.59
SHMT2-215ENST00000554656 SYKP43405 635 aa11.39□□□□□ -0.59
SHMT2-215ENST00000554656 GPR15P49685 360 aa11.39□□□□□ -0.59
SHMT2-215ENST00000554656 CCR3P51677 355 aa11.39□□□□□ -0.59
SHMT2-215ENST00000554656 NDUFA8P51970 172 aa11.39□□□□□ -0.59
SHMT2-215ENST00000554656 MLLT6P55198 1093 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-215ENST00000554656 POU5F1Q01860 360 aaKnown RBP11.39□□□□□ -0.59
SHMT2-215ENST00000554656 PUM1Q14671 1186 aaKnown RBP eCLIP11.39□□□□□ -0.59
SHMT2-215ENST00000554656 LPAL2Q16609 132 aa11.39□□□□□ -0.59
SHMT2-215ENST00000554656 MGAT5BQ3V5L5 792 aa11.39□□□□□ -0.59
SHMT2-215ENST00000554656 SLFN12LQ6IEE8 588 aa11.39□□□□□ -0.59
SHMT2-215ENST00000554656 BRSK2Q8IWQ3 736 aa11.39□□□□□ -0.59
SHMT2-215ENST00000554656 YAF2Q8IY57 180 aa11.39□□□□□ -0.59
SHMT2-215ENST00000554656 C1orf127Q8N9H9 656 aa11.39□□□□□ -0.59
SHMT2-215ENST00000554656 CSGALNACT1Q8TDX6 532 aa11.39□□□□□ -0.59
SHMT2-215ENST00000554656 POMGNT1Q8WZA1 660 aa11.39□□□□□ -0.59
SHMT2-215ENST00000554656 HVCN1Q96D96 273 aa11.39□□□□□ -0.59
SHMT2-215ENST00000554656 CHFRQ96EP1 664 aa11.39□□□□□ -0.59
SHMT2-215ENST00000554656 SAAL1Q96ER3 474 aa11.39□□□□□ -0.59
SHMT2-215ENST00000554656 CCDC34Q96HJ3 373 aa11.39□□□□□ -0.59
SHMT2-215ENST00000554656 FAM213AQ9BRX8 229 aa11.39□□□□□ -0.59
SHMT2-215ENST00000554656 SLC46A2Q9BY10 475 aa11.39□□□□□ -0.59
SHMT2-215ENST00000554656 FAM126AQ9BYI3 521 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-215ENST00000554656 TASP1Q9H6P5 420 aa11.39□□□□□ -0.59
SHMT2-215ENST00000554656 OBP2AQ9NY56 170 aa11.39□□□□□ -0.59
SHMT2-215ENST00000554656 ABI2Q9NYB9 513 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-215ENST00000554656 DSEQ9UL01 958 aa11.39□□□□□ -0.59
SHMT2-215ENST00000554656 SDK1Q7Z5N4 2213 aa11.38□□□□□ -0.59
SHMT2-215ENST00000554656 FRMD3A2A2Y4 597 aa11.38□□□□□ -0.59
SHMT2-215ENST00000554656 KPNA7A9QM74 516 aa11.38□□□□□ -0.59
SHMT2-215ENST00000554656 CHURC1-FNTBB4DL54 471 aa11.38□□□□□ -0.59
SHMT2-215ENST00000554656 HCRTO43612 131 aa11.38□□□□□ -0.59
SHMT2-215ENST00000554656 TADA3O75528 432 aa11.38□□□□□ -0.59
SHMT2-215ENST00000554656 IL18RAPO95256 599 aa11.38□□□□□ -0.59
SHMT2-215ENST00000554656 CCDC192P0DO97 292 aa11.38□□□□□ -0.59
SHMT2-215ENST00000554656 WEE1P30291 646 aa11.38□□□□□ -0.59
SHMT2-215ENST00000554656 POLR2BP30876 1174 aaKnown RBP11.38□□□□□ -0.59
SHMT2-215ENST00000554656 ABCD1P33897 745 aa11.38□□□□□ -0.59
SHMT2-215ENST00000554656 FNTBP49356 437 aa11.38□□□□□ -0.59
SHMT2-215ENST00000554656 TUFMP49411 452 aaKnown RBP11.38□□□□□ -0.59
SHMT2-215ENST00000554656 KPNA1P52294 538 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-215ENST00000554656 SRSF5Q13243 272 aaKnown RBP11.38□□□□□ -0.59
SHMT2-215ENST00000554656 CCINQ13939 588 aa11.38□□□□□ -0.59
SHMT2-215ENST00000554656 PON2Q15165 354 aa11.38□□□□□ -0.59
SHMT2-215ENST00000554656 ARHGAP29Q52LW3 1261 aa11.38□□□□□ -0.59
SHMT2-215ENST00000554656 SDHAF4Q5VUM1 108 aa11.38□□□□□ -0.59
SHMT2-215ENST00000554656 PKN3Q6P5Z2 889 aa11.38□□□□□ -0.59
SHMT2-215ENST00000554656 ITIH5Q86UX2 942 aa11.38□□□□□ -0.59
SHMT2-215ENST00000554656 OSTM1Q86WC4 334 aa11.38□□□□□ -0.59
SHMT2-215ENST00000554656 PDCL2Q8N4E4 241 aa11.38□□□□□ -0.59
SHMT2-215ENST00000554656 SPEM1Q8N4L4 309 aa11.38□□□□□ -0.59
SHMT2-215ENST00000554656 SPPL2BQ8TCT7 592 aa11.38□□□□□ -0.59
SHMT2-215ENST00000554656 BPIFB1Q8TDL5 484 aa11.38□□□□□ -0.59
SHMT2-215ENST00000554656 MSANTD3Q96H12 275 aa11.38□□□□□ -0.59
SHMT2-215ENST00000554656 PKMYT1Q99640 499 aa11.38□□□□□ -0.59
SHMT2-215ENST00000554656 CBWD1Q9BRT8 395 aa11.38□□□□□ -0.59
SHMT2-215ENST00000554656 FUCA2Q9BTY2 467 aa11.38□□□□□ -0.59
SHMT2-215ENST00000554656 TSPY26PQ9H489 355 aa11.38□□□□□ -0.59
SHMT2-215ENST00000554656 C8orf33Q9H7E9 229 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-215ENST00000554656 MRPL44Q9H9J2 332 aaKnown RBP11.38□□□□□ -0.59
SHMT2-215ENST00000554656 SEL1LQ9UBV2 794 aa11.38□□□□□ -0.59
SHMT2-215ENST00000554656 SIX4Q9UIU6 781 aa11.38□□□□□ -0.59
SHMT2-215ENST00000554656 HOOK1Q9UJC3 728 aaKnown RBP11.38□□□□□ -0.59
SHMT2-215ENST00000554656 L1RE1Q9UN81 338 aa11.38□□□□□ -0.59
SHMT2-215ENST00000554656 CCL26Q9Y258 94 aa11.38□□□□□ -0.59
SHMT2-215ENST00000554656 PTPRJQ12913 1337 aa11.37□□□□□ -0.59
SHMT2-215ENST00000554656 GOLGA8IPA6NC78 632 aa11.37□□□□□ -0.59
SHMT2-215ENST00000554656 OTOL1A6NHN0 477 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-215ENST00000554656 GOLGA8JA6NMD2 632 aa11.37□□□□□ -0.59
SHMT2-215ENST00000554656 HRO43593 1189 aa11.37□□□□□ -0.59
SHMT2-215ENST00000554656 PAPSS2O95340 614 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-215ENST00000554656 FGF19O95750 216 aa11.37□□□□□ -0.59
SHMT2-215ENST00000554656 F11P03951 625 aa11.37□□□□□ -0.59
SHMT2-215ENST00000554656 ITGB3P05106 788 aa11.37□□□□□ -0.59
SHMT2-215ENST00000554656 GAP43P17677 238 aa11.37□□□□□ -0.59
SHMT2-215ENST00000554656 CDC25CP30307 473 aa11.37□□□□□ -0.59
SHMT2-215ENST00000554656 TXLNAP40222 546 aa11.37□□□□□ -0.59
SHMT2-215ENST00000554656 CXCL12P48061 93 aa11.37□□□□□ -0.59
SHMT2-215ENST00000554656 NLRP12P59046 1061 aa11.37□□□□□ -0.59
SHMT2-215ENST00000554656 TFAMQ00059 246 aaKnown RBP11.37□□□□□ -0.59
SHMT2-215ENST00000554656 VEPH1Q14D04 833 aa11.37□□□□□ -0.59
SHMT2-215ENST00000554656 SV2CQ496J9 727 aa11.37□□□□□ -0.59
SHMT2-215ENST00000554656 ARHGAP15Q53QZ3 475 aa11.37□□□□□ -0.59
SHMT2-215ENST00000554656 RRAGBQ5VZM2 374 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms