RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 KCNA4P22459 653 aa26.1■■□□□ 1.77
FOXA1-204ENST00000554607 HOXC13P31276 330 aa26.1■■□□□ 1.77
FOXA1-204ENST00000554607 LONP1P36776 959 aaKnown RBP26.1■■□□□ 1.77
FOXA1-204ENST00000554607 PNPLA4P41247 253 aa26.1■■□□□ 1.77
FOXA1-204ENST00000554607 PXNP49023 591 aaPredicted RBP26.1■■□□□ 1.77
FOXA1-204ENST00000554607 POSTNQ15063 836 aa26.1■■□□□ 1.77
FOXA1-204ENST00000554607 PDGFRLQ15198 375 aa26.1■■□□□ 1.77
FOXA1-204ENST00000554607 NFE2Q16621 373 aaPredicted RBP26.1■■□□□ 1.77
FOXA1-204ENST00000554607 PKN3Q6P5Z2 889 aa26.1■■□□□ 1.77
FOXA1-204ENST00000554607 TMEM150AQ86TG1 271 aa26.1■■□□□ 1.77
FOXA1-204ENST00000554607 MON1AQ86VX9 555 aa26.1■■□□□ 1.77
FOXA1-204ENST00000554607 CCL26Q9Y258 94 aa26.1■■□□□ 1.77
FOXA1-204ENST00000554607 SPAG17Q6Q759 2223 aa26.09■■□□□ 1.77
FOXA1-204ENST00000554607 IL18RAPO95256 599 aa26.09■■□□□ 1.77
FOXA1-204ENST00000554607 ZNF268Q14587 947 aaPredicted RBP26.09■■□□□ 1.77
FOXA1-204ENST00000554607 SF3A2Q15428 464 aaKnown RBP26.09■■□□□ 1.77
FOXA1-204ENST00000554607 FBXO43Q4G163 708 aa26.09■■□□□ 1.77
FOXA1-204ENST00000554607 ZC2HC1CQ53FD0 456 aaPredicted RBP26.09■■□□□ 1.77
FOXA1-204ENST00000554607 TRIM68Q6AZZ1 485 aa26.09■■□□□ 1.77
FOXA1-204ENST00000554607 KBTBD6Q86V97 674 aa26.09■■□□□ 1.77
FOXA1-204ENST00000554607 KRI1Q8N9T8 703 aaKnown RBP26.09■■□□□ 1.77
FOXA1-204ENST00000554607 LRRC15Q8TF66 581 aa26.09■■□□□ 1.77
FOXA1-204ENST00000554607 ZC3H10Q96K80 434 aaKnown RBP26.09■■□□□ 1.77
FOXA1-204ENST00000554607 UXTQ9UBK9 157 aaPredicted RBP26.09■■□□□ 1.77
FOXA1-204ENST00000554607 PRPF40AO75400 957 aaKnown RBP26.08■■□□□ 1.77
FOXA1-204ENST00000554607 GJB2P29033 226 aa26.08■■□□□ 1.77
FOXA1-204ENST00000554607 KARSQ15046 597 aaKnown RBP26.08■■□□□ 1.77
FOXA1-204ENST00000554607 RABEP1Q15276 862 aa26.08■■□□□ 1.77
FOXA1-204ENST00000554607 TXNDC8Q6A555 127 aa26.08■■□□□ 1.77
FOXA1-204ENST00000554607 POMGNT1Q8WZA1 660 aa26.08■■□□□ 1.77
FOXA1-204ENST00000554607 LARP4BQ92615 738 aaKnown RBP26.08■■□□□ 1.77
FOXA1-204ENST00000554607 HVCN1Q96D96 273 aa26.08■■□□□ 1.77
FOXA1-204ENST00000554607 ANGPTL2Q9UKU9 493 aa26.08■■□□□ 1.77
FOXA1-204ENST00000554607 MAGED2Q9UNF1 606 aaPredicted RBP26.08■■□□□ 1.77
FOXA1-204ENST00000554607 CNOT1A5YKK6 2376 aaKnown RBP26.08■■□□□ 1.77
FOXA1-204ENST00000554607 TCHHQ07283 1943 aa26.08■■□□□ 1.76
FOXA1-204ENST00000554607 CHD8Q9HCK8 2581 aa26.07■■□□□ 1.76
FOXA1-204ENST00000554607 MAP1BP46821 2468 aaKnown RBP26.07■■□□□ 1.76
FOXA1-204ENST00000554607 OTOL1A6NHN0 477 aaPredicted RBP26.07■■□□□ 1.76
FOXA1-204ENST00000554607 TISP43B9A030 160 aa26.07■■□□□ 1.76
FOXA1-204ENST00000554607 RNF40O75150 1001 aa26.07■■□□□ 1.76
FOXA1-204ENST00000554607 DDIT3P35638 169 aa26.07■■□□□ 1.76
FOXA1-204ENST00000554607 GALK1P51570 392 aa26.07■■□□□ 1.76
FOXA1-204ENST00000554607 RPL10AP62906 217 aaKnown RBP26.07■■□□□ 1.76
FOXA1-204ENST00000554607 LEO1Q8WVC0 666 aaPredicted RBP26.07■■□□□ 1.76
FOXA1-204ENST00000554607 P2RY13Q9BPV8 354 aa26.07■■□□□ 1.76
FOXA1-204ENST00000554607 PI4K2AQ9BTU6 479 aa26.07■■□□□ 1.76
FOXA1-204ENST00000554607 ZNF638Q14966 1978 aaKnown RBP26.07■■□□□ 1.76
FOXA1-204ENST00000554607 DENND4CQ5VZ89 1909 aa26.06■■□□□ 1.76
FOXA1-204ENST00000554607 TM4SF5O14894 197 aa26.06■■□□□ 1.76
FOXA1-204ENST00000554607 EGFP01133 1207 aa26.06■■□□□ 1.76
FOXA1-204ENST00000554607 CCDC6Q16204 474 aa26.06■■□□□ 1.76
FOXA1-204ENST00000554607 PLA2G2CQ5R387 149 aa26.06■■□□□ 1.76
FOXA1-204ENST00000554607 STPG1Q5TH74 334 aa26.06■■□□□ 1.76
FOXA1-204ENST00000554607 CRELD2Q6UXH1 353 aaPredicted RBP26.06■■□□□ 1.76
FOXA1-204ENST00000554607 ZNF720Q7Z2F6 126 aa26.06■■□□□ 1.76
FOXA1-204ENST00000554607 EFCAB13Q8IY85 973 aa26.06■■□□□ 1.76
FOXA1-204ENST00000554607 CPA6Q8N4T0 437 aa26.06■■□□□ 1.76
FOXA1-204ENST00000554607 CHFRQ96EP1 664 aa26.06■■□□□ 1.76
FOXA1-204ENST00000554607 ACBD6Q9BR61 282 aa26.06■■□□□ 1.76
FOXA1-204ENST00000554607 ABCB6Q9NP58 842 aa26.06■■□□□ 1.76
FOXA1-204ENST00000554607 VPS45Q9NRW7 570 aa26.06■■□□□ 1.76
FOXA1-204ENST00000554607 TMLHEQ9NVH6 421 aa26.06■■□□□ 1.76
FOXA1-204ENST00000554607 ARSAP15289 507 aa26.05■■□□□ 1.76
FOXA1-204ENST00000554607 N4BP2L1Q5TBK1 243 aaPredicted RBP26.05■■□□□ 1.76
FOXA1-204ENST00000554607 CACTINQ8WUQ7 758 aaKnown RBP26.05■■□□□ 1.76
FOXA1-204ENST00000554607 TMX3Q96JJ7 454 aa26.05■■□□□ 1.76
FOXA1-204ENST00000554607 EXOC7Q9UPT5 735 aa26.05■■□□□ 1.76
FOXA1-204ENST00000554607 HUS1O60921 280 aa26.04■■□□□ 1.76
FOXA1-204ENST00000554607 GJA4P35212 333 aa26.04■■□□□ 1.76
FOXA1-204ENST00000554607 MYL7Q01449 175 aa26.04■■□□□ 1.76
FOXA1-204ENST00000554607 FAM160A1Q05DH4 1040 aa26.04■■□□□ 1.76
FOXA1-204ENST00000554607 TMEM86AQ8N2M4 240 aa26.04■■□□□ 1.76
FOXA1-204ENST00000554607 PDCL2Q8N4E4 241 aa26.04■■□□□ 1.76
FOXA1-204ENST00000554607 TRMT2BQ96GJ1 504 aaKnown RBP26.04■■□□□ 1.76
FOXA1-204ENST00000554607 TMEM206Q9H813 350 aa26.04■■□□□ 1.76
FOXA1-204ENST00000554607 FBRSL1Q9HCM7 1045 aaKnown RBP26.04■■□□□ 1.76
FOXA1-204ENST00000554607 ATG2BQ96BY7 2078 aa26.03■■□□□ 1.76
FOXA1-204ENST00000554607 NOL4O94818 638 aa26.03■■□□□ 1.76
FOXA1-204ENST00000554607 RHOBTB1O94844 696 aa26.03■■□□□ 1.76
FOXA1-204ENST00000554607 PMLP29590 882 aa26.03■■□□□ 1.76
FOXA1-204ENST00000554607 ADSSP30520 456 aa26.03■■□□□ 1.76
FOXA1-204ENST00000554607 MPLP40238 635 aa26.03■■□□□ 1.76
FOXA1-204ENST00000554607 GPR15P49685 360 aa26.03■■□□□ 1.76
FOXA1-204ENST00000554607 MTF1Q14872 753 aa26.03■■□□□ 1.76
FOXA1-204ENST00000554607 ELF2Q15723 593 aa26.03■■□□□ 1.76
FOXA1-204ENST00000554607 PLK5Q496M5 336 aa26.03■■□□□ 1.76
FOXA1-204ENST00000554607 SYT13Q7L8C5 426 aa26.03■■□□□ 1.76
FOXA1-204ENST00000554607 CCDC26Q8TAB7 109 aa26.03■■□□□ 1.76
FOXA1-204ENST00000554607 MYRFLQ96LU7 910 aa26.03■■□□□ 1.76
FOXA1-204ENST00000554607 ECT2Q9H8V3 914 aa26.03■■□□□ 1.76
FOXA1-204ENST00000554607 RXFP3Q9NSD7 469 aa26.03■■□□□ 1.76
FOXA1-204ENST00000554607 DUS2Q9NX74 493 aaKnown RBP26.03■■□□□ 1.76
FOXA1-204ENST00000554607 DDX43Q9NXZ2 648 aaKnown RBP26.03■■□□□ 1.76
FOXA1-204ENST00000554607 SEL1LQ9UBV2 794 aa26.03■■□□□ 1.76
FOXA1-204ENST00000554607 AGAP1Q9UPQ3 857 aa26.03■■□□□ 1.76
FOXA1-204ENST00000554607 USP17L7P0C7H9 530 aa26.02■■□□□ 1.76
FOXA1-204ENST00000554607 POLR2BP30876 1174 aaKnown RBP26.02■■□□□ 1.76
FOXA1-204ENST00000554607 SHC2P98077 582 aa26.02■■□□□ 1.76
FOXA1-204ENST00000554607 TFAMQ00059 246 aaKnown RBP26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms