RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 HSFX1Q9UBD0 423 aa11.42□□□□□ -0.58
SHMT2-213ENST00000554600 GTF3C4Q9UKN8 822 aa11.42□□□□□ -0.58
SHMT2-213ENST00000554600 TRAF3IP3Q9Y228 551 aa11.42□□□□□ -0.58
SHMT2-213ENST00000554600 ASB3Q9Y575 518 aa11.42□□□□□ -0.58
SHMT2-213ENST00000554600 PCDHA5Q9Y5H7 936 aa11.42□□□□□ -0.58
SHMT2-213ENST00000554600 CACNA1IQ9P0X4 2223 aa11.41□□□□□ -0.58
SHMT2-213ENST00000554600 ATP2C2O75185 946 aa11.41□□□□□ -0.58
SHMT2-213ENST00000554600 ATF6P18850 670 aa11.41□□□□□ -0.58
SHMT2-213ENST00000554600 WARSP23381 471 aaKnown RBP11.41□□□□□ -0.58
SHMT2-213ENST00000554600 CYP2F1P24903 491 aa11.41□□□□□ -0.58
SHMT2-213ENST00000554600 LMO2P25791 158 aa11.41□□□□□ -0.58
SHMT2-213ENST00000554600 GABRR2P28476 465 aa11.41□□□□□ -0.58
SHMT2-213ENST00000554600 ATICP31939 592 aa11.41□□□□□ -0.58
SHMT2-213ENST00000554600 PSMC2P35998 433 aaKnown RBP11.41□□□□□ -0.58
SHMT2-213ENST00000554600 GNL1P36915 607 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-213ENST00000554600 PIK3CAP42336 1068 aa11.41□□□□□ -0.58
SHMT2-213ENST00000554600 VAMP7P51809 220 aa11.41□□□□□ -0.58
SHMT2-213ENST00000554600 RPL10AP62906 217 aaKnown RBP11.41□□□□□ -0.58
SHMT2-213ENST00000554600 CYP27A1Q02318 531 aa11.41□□□□□ -0.58
SHMT2-213ENST00000554600 NCOA4Q13772 614 aa11.41□□□□□ -0.58
SHMT2-213ENST00000554600 CCDC142Q17RM4 750 aa11.41□□□□□ -0.58
SHMT2-213ENST00000554600 ARHGAP15Q53QZ3 475 aa11.41□□□□□ -0.58
SHMT2-213ENST00000554600 FAM78AQ5JUQ0 283 aa11.41□□□□□ -0.58
SHMT2-213ENST00000554600 ZNF658Q5TYW1 1059 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-213ENST00000554600 SDHAF4Q5VUM1 108 aa11.41□□□□□ -0.58
SHMT2-213ENST00000554600 TDRD10Q5VZ19 366 aaKnown RBP11.41□□□□□ -0.58
SHMT2-213ENST00000554600 C4orf50Q6ZRC1 276 aa11.41□□□□□ -0.58
SHMT2-213ENST00000554600 SHKBP1Q8TBC3 707 aa11.41□□□□□ -0.58
SHMT2-213ENST00000554600 TMC2Q8TDI7 906 aa11.41□□□□□ -0.58
SHMT2-213ENST00000554600 KBTBD7Q8WVZ9 684 aa11.41□□□□□ -0.58
SHMT2-213ENST00000554600 PSMG2Q969U7 264 aa11.41□□□□□ -0.58
SHMT2-213ENST00000554600 ELMO3Q96BJ8 720 aa11.41□□□□□ -0.58
SHMT2-213ENST00000554600 EEF2KMTQ96G04 330 aa11.41□□□□□ -0.58
SHMT2-213ENST00000554600 GSDMAQ96QA5 445 aa11.41□□□□□ -0.58
SHMT2-213ENST00000554600 MRPL45Q9BRJ2 306 aaKnown RBP11.41□□□□□ -0.58
SHMT2-213ENST00000554600 GZF1Q9H116 711 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-213ENST00000554600 ZFP14Q9HCL3 533 aa11.41□□□□□ -0.58
SHMT2-213ENST00000554600 ZNF334Q9HCZ1 680 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-213ENST00000554600 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.41□□□□□ -0.581e-9■■■■■ 76.9
SHMT2-213ENST00000554600 CDH9Q9ULB4 789 aa11.41□□□□□ -0.58
SHMT2-213ENST00000554600 MAGED2Q9UNF1 606 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-213ENST00000554600 MYBPHLA2RUH7 354 aa11.4□□□□□ -0.58
SHMT2-213ENST00000554600 A8MXQ7 604 aa11.4□□□□□ -0.58
SHMT2-213ENST00000554600 NRG2O14511 850 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-213ENST00000554600 GABRDO14764 452 aa11.4□□□□□ -0.58
SHMT2-213ENST00000554600 CETN3O15182 167 aa11.4□□□□□ -0.58
SHMT2-213ENST00000554600 AKAP3O75969 853 aa11.4□□□□□ -0.58
SHMT2-213ENST00000554600 FGF19O95750 216 aa11.4□□□□□ -0.58
SHMT2-213ENST00000554600 TRIM49P0CI25 452 aa11.4□□□□□ -0.58
SHMT2-213ENST00000554600 TRIM49CP0CI26 452 aa11.4□□□□□ -0.58
SHMT2-213ENST00000554600 PRCPP42785 496 aa11.4□□□□□ -0.58
SHMT2-213ENST00000554600 GPR15P49685 360 aa11.4□□□□□ -0.58
SHMT2-213ENST00000554600 EPHA5P54756 1037 aa11.4□□□□□ -0.58
SHMT2-213ENST00000554600 VCPP55072 806 aaKnown RBP11.4□□□□□ -0.58
SHMT2-213ENST00000554600 GPC5P78333 572 aa11.4□□□□□ -0.58
SHMT2-213ENST00000554600 STIM1Q13586 685 aa11.4□□□□□ -0.58
SHMT2-213ENST00000554600 DDR2Q16832 855 aa11.4□□□□□ -0.58
SHMT2-213ENST00000554600 MDH1BQ5I0G3 518 aa11.4□□□□□ -0.58
SHMT2-213ENST00000554600 GPR158Q5T848 1215 aa11.4□□□□□ -0.58
SHMT2-213ENST00000554600 TANGO2Q6ICL3 276 aa11.4□□□□□ -0.58
SHMT2-213ENST00000554600 INTS8Q75QN2 995 aaKnown RBP11.4□□□□□ -0.58
SHMT2-213ENST00000554600 TMC8Q8IU68 726 aa11.4□□□□□ -0.58
SHMT2-213ENST00000554600 GPIHBP1Q8IV16 184 aa11.4□□□□□ -0.58
SHMT2-213ENST00000554600 STKLD1Q8NE28 680 aa11.4□□□□□ -0.58
SHMT2-213ENST00000554600 ZSCAN18Q8TBC5 510 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-213ENST00000554600 MYLPFQ96A32 169 aa11.4□□□□□ -0.58
SHMT2-213ENST00000554600 IMPG2Q9BZV3 1241 aa11.4□□□□□ -0.58
SHMT2-213ENST00000554600 GPR88Q9GZN0 384 aa11.4□□□□□ -0.58
SHMT2-213ENST00000554600 MAGEC2Q9UBF1 373 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-213ENST00000554600 WNT16Q9UBV4 365 aa11.4□□□□□ -0.58
SHMT2-213ENST00000554600 MYOFQ9NZM1 2061 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 BIN1O00499 593 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 DPYSL4O14531 572 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 MAPK13O15264 365 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 TACC1O75410 805 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 MOSPD3O75425 235 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 ECI2O75521 394 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 MICAL2O94851 1124 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 VNN1O95497 513 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 HLA-DRAP01903 254 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 C4BPAP04003 597 aaKnown RBP11.39□□□□□ -0.59
SHMT2-213ENST00000554600 EPB41P11171 864 aaKnown RBP11.39□□□□□ -0.59
SHMT2-213ENST00000554600 P4HA1P13674 534 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 CDC25CP30307 473 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 AVPR2P30518 371 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 VIPR2P41587 438 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 RAP1GAPP47736 663 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 GCLMP48507 274 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 MRE11P49959 708 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 CDH8P55286 799 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 CYP4F8P98187 520 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 GRM2Q14416 872 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 MAPRE1Q15691 268 aaKnown RBP11.39□□□□□ -0.59
SHMT2-213ENST00000554600 NFIL3Q16649 462 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 EDRF1Q3B7T1 1238 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 STXBP5Q5T5C0 1151 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 TCERG1LQ5VWI1 586 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 KLHL10Q6JEL2 608 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 GAREM2Q75VX8 874 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 SV2AQ7L0J3 742 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms