RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 CDK5RAP2Q96SN8 1893 aa5.63□□□□□ -1.51
ATXN3-228ENST00000554592 TSPY2A6NKD2 308 aa5.63□□□□□ -1.51
ATXN3-228ENST00000554592 H0Y858 1186 aa5.63□□□□□ -1.51
ATXN3-228ENST00000554592 GRM6O15303 877 aa5.63□□□□□ -1.51
ATXN3-228ENST00000554592 TRIM13O60858 407 aa5.63□□□□□ -1.51
ATXN3-228ENST00000554592 CAND2O75155 1236 aa5.63□□□□□ -1.51
ATXN3-228ENST00000554592 EIF3JO75822 258 aaKnown RBP5.63□□□□□ -1.51
ATXN3-228ENST00000554592 F2P00734 622 aa5.63□□□□□ -1.51
ATXN3-228ENST00000554592 PLA2G1BP04054 148 aaKnown RBP5.63□□□□□ -1.51
ATXN3-228ENST00000554592 CKMP06732 381 aa5.63□□□□□ -1.51
ATXN3-228ENST00000554592 NCAM1P13591 858 aa5.63□□□□□ -1.51
ATXN3-228ENST00000554592 NAT1P18440 290 aa5.63□□□□□ -1.51
ATXN3-228ENST00000554592 CTNNB1P35222 781 aa5.63□□□□□ -1.51
ATXN3-228ENST00000554592 SOX5P35711 763 aa5.63□□□□□ -1.51
ATXN3-228ENST00000554592 BCL6P41182 706 aa5.63□□□□□ -1.51
ATXN3-228ENST00000554592 NDUFV1P49821 464 aa5.63□□□□□ -1.51
ATXN3-228ENST00000554592 AFF3P51826 1226 aaKnown RBP5.63□□□□□ -1.51
ATXN3-228ENST00000554592 NEK4P51957 841 aa5.63□□□□□ -1.51
ATXN3-228ENST00000554592 VCPP55072 806 aaKnown RBP5.63□□□□□ -1.51
ATXN3-228ENST00000554592 ANAPC15P60006 121 aa5.63□□□□□ -1.51
ATXN3-228ENST00000554592 COASYQ13057 564 aa5.63□□□□□ -1.51
ATXN3-228ENST00000554592 PAK1Q13153 545 aa5.63□□□□□ -1.51
ATXN3-228ENST00000554592 LSAMPQ13449 338 aa5.63□□□□□ -1.51
ATXN3-228ENST00000554592 TARBP2Q15633 366 aaKnown RBP5.63□□□□□ -1.51
ATXN3-228ENST00000554592 SEPT7Q16181 437 aaKnown RBP5.63□□□□□ -1.51
ATXN3-228ENST00000554592 KIZQ2M2Z5 673 aa5.63□□□□□ -1.51
ATXN3-228ENST00000554592 CDCA2Q69YH5 1023 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-228ENST00000554592 ZCCHC8Q6NZY4 707 aaKnown RBP5.63□□□□□ -1.51
ATXN3-228ENST00000554592 SERINC5Q86VE9 423 aa5.63□□□□□ -1.51
ATXN3-228ENST00000554592 TMEM151BQ8IW70 566 aa5.63□□□□□ -1.51
ATXN3-228ENST00000554592 PPTC7Q8NI37 304 aa5.63□□□□□ -1.51
ATXN3-228ENST00000554592 LEO1Q8WVC0 666 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-228ENST00000554592 APBB2Q92870 758 aa5.63□□□□□ -1.51
ATXN3-228ENST00000554592 MSLNLQ96KJ4 702 aa5.63□□□□□ -1.51
ATXN3-228ENST00000554592 FSD1Q9BTV5 496 aa5.63□□□□□ -1.51
ATXN3-228ENST00000554592 PHF7Q9BWX1 381 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-228ENST00000554592 IFIH1Q9BYX4 1025 aaKnown RBP5.63□□□□□ -1.51
ATXN3-228ENST00000554592 NAPBQ9H115 298 aa5.63□□□□□ -1.51
ATXN3-228ENST00000554592 TLR9Q9NR96 1032 aa5.63□□□□□ -1.51
ATXN3-228ENST00000554592 ECHDC1Q9NTX5 307 aa5.63□□□□□ -1.51
ATXN3-228ENST00000554592 SIT1Q9Y3P8 196 aa5.63□□□□□ -1.51
ATXN3-228ENST00000554592 WDR19Q8NEZ3 1342 aa5.63□□□□□ -1.51
ATXN3-228ENST00000554592 C17orf102A2RUQ5 167 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 B4E1Z4 1266 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 M0R2C6 588 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 FFAR3O14843 346 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 LINC01565O15544 149 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 RANBP6O60518 1105 aaKnown RBP5.62□□□□□ -1.51
ATXN3-228ENST00000554592 NMT2O60551 498 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 TBX10O75333 385 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 MMP1P03956 469 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 SOD2P04179 222 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 HMGB1P09429 215 aaKnown RBP5.62□□□□□ -1.51
ATXN3-228ENST00000554592 SRGAP2CP0DJJ0 459 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 TOP1P11387 765 aaKnown RBP5.62□□□□□ -1.51
ATXN3-228ENST00000554592 PMLP29590 882 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 ICAM3P32942 547 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 NBL1P41271 181 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 MC3RP41968 323 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 ID4P47928 161 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 LIMS1P48059 325 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 RRP1P56182 461 aaKnown RBP5.62□□□□□ -1.51
ATXN3-228ENST00000554592 RPL11P62913 178 aaKnown RBP5.62□□□□□ -1.51
ATXN3-228ENST00000554592 SLC9A5Q14940 896 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 PKN3Q6P5Z2 889 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 KCNV1Q6PIU1 500 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 UBE2R2Q712K3 238 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-228ENST00000554592 ASCL5Q7RTU5 278 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 STRA8Q7Z7C7 330 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 CABP7Q86V35 215 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 TEX2Q8IWB9 1127 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 ZC3H7AQ8IWR0 971 aaKnown RBP5.62□□□□□ -1.51
ATXN3-228ENST00000554592 AHI1Q8N157 1196 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 AFAP1L2Q8N4X5 818 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 EFHBQ8N7U6 833 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 SMRP1Q8NCR6 262 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 CPA5Q8WXQ8 436 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 ATP6V0A1Q93050 837 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 PEX11GQ96HA9 241 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 CHAMP1Q96JM3 812 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 RPGRIP1Q96KN7 1286 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 C20orf173Q96LM9 149 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 RIPOR3Q96MK2 946 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 PWWP2AQ96N64 755 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 TAAR1Q96RJ0 339 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 RMDN3Q96TC7 470 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 TMEM47Q9BQJ4 181 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 IPPKQ9H8X2 491 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 INCENPQ9NQS7 918 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 TCP11L1Q9NUJ3 509 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 MARCH2Q9P0N8 246 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 SAMD15Q9P1V8 674 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.62□□□□□ -1.51
ATXN3-228ENST00000554592 COQ6Q9Y2Z9 468 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 X6R8D5 127 aa5.62□□□□□ -1.51
ATXN3-228ENST00000554592 PRR23AA6NEV1 266 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 C22orf46C9J442 243 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 WNT9AO14904 365 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 SGSM2O43147 1006 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 INHBBP09529 407 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms