RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 FAM129BQ96TA1 746 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 TSC22D3Q99576 134 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 FANCLQ9NW38 375 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 CA4P22748 312 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 PRDX5P30044 214 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 PBX3P40426 434 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 PLOD1Q02809 727 aaPredicted RBP3.44□□□□□ -1.86
SYNE2-212ENST00000554584 GRSF1Q12849 480 aaKnown RBP eCLIP3.44□□□□□ -1.86
SYNE2-212ENST00000554584 SPATA1Q5VX52 437 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 C1orf54Q8WWF1 131 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 ATG4CQ96DT6 458 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 CELF6Q96J87 481 aaKnown RBP3.44□□□□□ -1.86
SYNE2-212ENST00000554584 TAAR1Q96RJ0 339 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 GAL3ST4Q96RP7 486 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 PLK2Q9NYY3 685 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 TRIM64BA6NI03 449 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 PGK1P00558 417 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 MFAP3P55082 362 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 BNIP2Q12982 314 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 BAATQ14032 418 aaPredicted RBP3.44□□□□□ -1.86
SYNE2-212ENST00000554584 MORC3Q14149 939 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 CCNG2Q16589 344 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 PID1Q7Z2X4 250 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 METTL27Q8N6F8 245 aaPredicted RBP3.44□□□□□ -1.86
SYNE2-212ENST00000554584 RGSL1A5PLK6 1076 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 KPNA3O00505 521 aaPredicted RBP3.44□□□□□ -1.86
SYNE2-212ENST00000554584 FGRP09769 529 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 CYP2C9P11712 490 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 CYP4F2P78329 520 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 ZNF699Q32M78 642 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 MAP7D3Q8IWC1 876 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 NPLOC4Q8TAT6 608 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 BCAS4Q8TDM0 211 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 TINF2Q9BSI4 451 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 TRIM45Q9H8W5 580 aaPredicted RBP3.44□□□□□ -1.86
SYNE2-212ENST00000554584 LSM7Q9UK45 103 aaKnown RBP3.44□□□□□ -1.86
SYNE2-212ENST00000554584 NEDD4P46934 1319 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 MAP3K1Q13233 1512 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 KCNJ18B7U540 433 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 VTNP04004 478 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 RPL17P18621 184 aaKnown RBP3.44□□□□□ -1.86
SYNE2-212ENST00000554584 SRP54P61011 504 aaKnown RBP3.44□□□□□ -1.86
SYNE2-212ENST00000554584 EFEMP1Q12805 493 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 KCNJ12Q14500 433 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 TRIP10Q15642 601 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 ZDHHC20Q5W0Z9 365 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 LINS1Q8NG48 757 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 ACER1Q8TDN7 264 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 TEX13AQ9BXU3 409 aaPredicted RBP3.44□□□□□ -1.86
SYNE2-212ENST00000554584 WWOXQ9NZC7 414 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 PTPN23Q9H3S7 1636 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 GOLGA8KD6RF30 607 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 TLR2O60603 784 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 ZNF682O95780 498 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 EOMESO95936 686 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 C3orf67Q6ZVT6 689 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 PLD3Q8IV08 490 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 BLOC1S5Q8TDH9 187 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 TPD52L3Q96J77 140 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 LATS2Q9NRM7 1088 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 PHF24Q9UPV7 400 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 HEATR9A2RTY3 570 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 DLGAP3O95886 979 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 NLRP12P59046 1061 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 CNNM4Q6P4Q7 775 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 MDM1Q8TC05 714 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 YME1L1Q96TA2 773 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 LPIN3Q9BQK8 851 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 PXMP2Q9NR77 195 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 PCMTD2Q9NV79 361 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 KDM5BQ9UGL1 1544 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 YTHDC2Q9H6S0 1430 aaKnown RBP3.44□□□□□ -1.86
SYNE2-212ENST00000554584 SMIM22K7EJ46 135 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 ERN1O75460 977 aaKnown RBP3.44□□□□□ -1.86
SYNE2-212ENST00000554584 H2AFZP0C0S5 128 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 HPGDP15428 266 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 TSPAN8P19075 237 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 ARCN1P48444 511 aaKnown RBP3.44□□□□□ -1.86
SYNE2-212ENST00000554584 GFPT1Q06210 699 aaPredicted RBP3.44□□□□□ -1.86
SYNE2-212ENST00000554584 ZNF790Q6PG37 636 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 H2AFVQ71UI9 128 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 TMTC1Q8IUR5 882 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 GRIN3AQ8TCU5 1115 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 DTX3LQ8TDB6 740 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 ELAC2Q9BQ52 826 aaKnown RBP3.44□□□□□ -1.86
SYNE2-212ENST00000554584 NUP58Q9BVL2 599 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 TEX28O15482 410 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 DAB1O75553 588 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 CHEK2O96017 543 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 BMP1P13497 986 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 UQCRC1P31930 480 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 NUP62P37198 522 aaPredicted RBP3.44□□□□□ -1.86
SYNE2-212ENST00000554584 SERPINH1P50454 418 aaKnown RBP3.44□□□□□ -1.86
SYNE2-212ENST00000554584 GPC3P51654 580 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 LRRC14Q15048 493 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 GNASQ5JWF2 1037 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 PLPP4Q5VZY2 271 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 TCEANCQ8N8B7 351 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 CALR3Q96L12 384 aaKnown RBP3.44□□□□□ -1.86
SYNE2-212ENST00000554584 C7orf25Q9BPX7 421 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms