RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 LGALS13Q9UHV8 139 aa16.52■□□□□ 0.24
ARHGEF40-203ENST00000554514 CYTH4Q9UIA0 394 aa16.52■□□□□ 0.24
ARHGEF40-203ENST00000554514 LCTP09848 1927 aa16.52■□□□□ 0.24
ARHGEF40-203ENST00000554514 IGKV6D-21A0A0A0MT36 114 aa16.52■□□□□ 0.23
ARHGEF40-203ENST00000554514 FAM47DPA6NHR8 397 aa16.52■□□□□ 0.23
ARHGEF40-203ENST00000554514 CST8O60676 142 aa16.52■□□□□ 0.23
ARHGEF40-203ENST00000554514 CXCL8P10145 99 aa16.52■□□□□ 0.23
ARHGEF40-203ENST00000554514 KRT3P12035 628 aa16.52■□□□□ 0.23
ARHGEF40-203ENST00000554514 CDKN2BP42772 138 aa16.52■□□□□ 0.23
ARHGEF40-203ENST00000554514 OTUD4Q01804 1114 aaKnown RBP16.52■□□□□ 0.23
ARHGEF40-203ENST00000554514 EEF1DP3Q658K8 133 aa16.52■□□□□ 0.23
ARHGEF40-203ENST00000554514 FITM2Q8N6M3 262 aa16.52■□□□□ 0.23
ARHGEF40-203ENST00000554514 GPATCH11Q8N954 259 aa16.52■□□□□ 0.23
ARHGEF40-203ENST00000554514 HSPH1Q92598 858 aa16.52■□□□□ 0.23
ARHGEF40-203ENST00000554514 ARL2BPQ9Y2Y0 163 aa16.52■□□□□ 0.23
ARHGEF40-203ENST00000554514 ITGBL1O95965 494 aaPredicted RBP16.51■□□□□ 0.23
ARHGEF40-203ENST00000554514 IL1R2P27930 398 aa16.51■□□□□ 0.23
ARHGEF40-203ENST00000554514 ASPAP45381 313 aa16.51■□□□□ 0.23
ARHGEF40-203ENST00000554514 BAG6P46379 1132 aa16.51■□□□□ 0.23
ARHGEF40-203ENST00000554514 CLCN3P51790 818 aa16.51■□□□□ 0.23
ARHGEF40-203ENST00000554514 NCALDP61601 193 aa16.51■□□□□ 0.23
ARHGEF40-203ENST00000554514 VGLL4Q14135 290 aa16.51■□□□□ 0.23
ARHGEF40-203ENST00000554514 TAF5Q15542 800 aa16.51■□□□□ 0.23
ARHGEF40-203ENST00000554514 SWT1Q5T5J6 900 aaKnown RBP16.51■□□□□ 0.23
ARHGEF40-203ENST00000554514 ANKRD22Q5VYY1 191 aa16.51■□□□□ 0.23
ARHGEF40-203ENST00000554514 ZPBP2Q6X784 338 aa16.51■□□□□ 0.23
ARHGEF40-203ENST00000554514 ACTL9Q8TC94 416 aa16.51■□□□□ 0.23
ARHGEF40-203ENST00000554514 COPS5Q92905 334 aa16.51■□□□□ 0.23
ARHGEF40-203ENST00000554514 MAGEB18Q96M61 343 aa16.51■□□□□ 0.23
ARHGEF40-203ENST00000554514 SLCO1B3Q9NPD5 702 aa16.51■□□□□ 0.23
ARHGEF40-203ENST00000554514 METTL5Q9NRN9 209 aaKnown RBP16.51■□□□□ 0.23
ARHGEF40-203ENST00000554514 A0A1W2PPM1 405 aa16.51■□□□□ 0.23
ARHGEF40-203ENST00000554514 IGF2BP3O00425 579 aaKnown RBP eCLIP16.51■□□□□ 0.23
ARHGEF40-203ENST00000554514 TCEA3O75764 348 aa16.51■□□□□ 0.23
ARHGEF40-203ENST00000554514 ATP6V1G2O95670 118 aa16.51■□□□□ 0.23
ARHGEF40-203ENST00000554514 TNNC2P02585 160 aa16.51■□□□□ 0.23
ARHGEF40-203ENST00000554514 TAC1P20366 129 aa16.51■□□□□ 0.23
ARHGEF40-203ENST00000554514 IL9RQ01113 521 aa16.51■□□□□ 0.23
ARHGEF40-203ENST00000554514 PIGHQ14442 188 aaPredicted RBP16.51■□□□□ 0.23
ARHGEF40-203ENST00000554514 NEDD9Q14511 834 aa16.51■□□□□ 0.23
ARHGEF40-203ENST00000554514 MAML1Q92585 1016 aa16.51■□□□□ 0.23
ARHGEF40-203ENST00000554514 TCRBV5S1A1TA0A578 114 aa16.5■□□□□ 0.23
ARHGEF40-203ENST00000554514 LSM8O95777 96 aaKnown RBP16.5■□□□□ 0.23
ARHGEF40-203ENST00000554514 HOXC6P09630 235 aa16.5■□□□□ 0.23
ARHGEF40-203ENST00000554514 CA4P22748 312 aa16.5■□□□□ 0.23
ARHGEF40-203ENST00000554514 SSTR1P30872 391 aa16.5■□□□□ 0.23
ARHGEF40-203ENST00000554514 CTCFP49711 727 aaPredicted RBP16.5■□□□□ 0.23
ARHGEF40-203ENST00000554514 EFNA5P52803 228 aa16.5■□□□□ 0.23
ARHGEF40-203ENST00000554514 PPP1R21Q6ZMI0 780 aa16.5■□□□□ 0.23
ARHGEF40-203ENST00000554514 TRABD2AQ86V40 505 aa16.5■□□□□ 0.23
ARHGEF40-203ENST00000554514 KIAA0319LQ8IZA0 1049 aa16.5■□□□□ 0.23
ARHGEF40-203ENST00000554514 NOD2Q9HC29 1040 aa16.5■□□□□ 0.23
ARHGEF40-203ENST00000554514 KLHL14Q9P2G3 628 aa16.5■□□□□ 0.23
ARHGEF40-203ENST00000554514 HMGXB4Q9UGU5 601 aa16.5■□□□□ 0.23
ARHGEF40-203ENST00000554514 CPSF3Q9UKF6 684 aaKnown RBP16.5■□□□□ 0.23
ARHGEF40-203ENST00000554514 WDR91A4D1P6 747 aa16.5■□□□□ 0.23
ARHGEF40-203ENST00000554514 GSTA1P08263 222 aa16.5■□□□□ 0.23
ARHGEF40-203ENST00000554514 RPA3P35244 121 aaPredicted RBP16.5■□□□□ 0.23
ARHGEF40-203ENST00000554514 MGAT5Q09328 741 aa16.5■□□□□ 0.23
ARHGEF40-203ENST00000554514 OASLQ15646 514 aaKnown RBP16.5■□□□□ 0.23
ARHGEF40-203ENST00000554514 RNASEH2BQ5TBB1 312 aaKnown RBP16.5■□□□□ 0.23
ARHGEF40-203ENST00000554514 ATF7IP2Q5U623 682 aa16.5■□□□□ 0.23
ARHGEF40-203ENST00000554514 CENPUQ71F23 418 aa16.5■□□□□ 0.23
ARHGEF40-203ENST00000554514 CCHCR1Q8TD31 782 aa16.5■□□□□ 0.23
ARHGEF40-203ENST00000554514 PRCCQ92733 491 aaPredicted RBP16.5■□□□□ 0.23
ARHGEF40-203ENST00000554514 KLHL29Q96CT2 875 aa16.5■□□□□ 0.23
ARHGEF40-203ENST00000554514 ANKRD36BP1Q96IX9 119 aa16.5■□□□□ 0.23
ARHGEF40-203ENST00000554514 KLF6Q99612 283 aaPredicted RBP16.5■□□□□ 0.23
ARHGEF40-203ENST00000554514 CALN1Q9BXU9 219 aa16.5■□□□□ 0.23
ARHGEF40-203ENST00000554514 A8MUI8 341 aa16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 GOLGA8RI6L899 631 aa16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 LRCH4O75427 683 aa16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 MCL1Q07820 350 aa16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 IER5Q5VY09 327 aa16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 LBX2Q6XYB7 198 aa16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 RFX6Q8HWS3 928 aa16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 ARFGAP1Q8N6T3 406 aa16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 RSAD2Q8WXG1 361 aa16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 SMC6Q96SB8 1091 aa16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 CPXM1Q96SM3 734 aa16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 SPATC1LQ9H0A9 340 aa16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 SMYD3Q9H7B4 428 aa16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 FZD9O00144 591 aa16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 MGRN1O60291 552 aa16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 TFDP1Q14186 410 aa16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 HIF1AQ16665 826 aa16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 MSS51Q4VC12 460 aa16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 PPP1R15BQ5SWA1 713 aa16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 PPP1R2P3Q6NXS1 205 aa16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 METTL7BQ6UX53 244 aa16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 FBXO16Q8IX29 292 aaPredicted RBP16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 XYLT2Q9H1B5 865 aa16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 C12orf65Q9H3J6 166 aaKnown RBP16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 MINDY3Q9H8M7 445 aa16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 NFICP08651 508 aa16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 AP3M2P53677 418 aa16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 COPS2P61201 443 aa16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 MORF4L2Q15014 288 aa16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 FNBP1LQ5T0N5 605 aa16.49■□□□□ 0.23
ARHGEF40-203ENST00000554514 CCDC91Q7Z6B0 441 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms