RNA–Protein interactions for RNA: ENST00000554302.1

RCCD1-202, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-202ENST00000554302 ZFYVE19Q96K21 471 aa23.52■■□□□ 1.36
RCCD1-202ENST00000554302 TNMDQ9H2S6 317 aa23.52■■□□□ 1.36
RCCD1-202ENST00000554302 PDE11AQ9HCR9 933 aa23.52■■□□□ 1.36
RCCD1-202ENST00000554302 KBTBD4Q9NVX7 518 aa23.52■■□□□ 1.36
RCCD1-202ENST00000554302 GTSE1Q9NYZ3 720 aa23.52■■□□□ 1.36
RCCD1-202ENST00000554302 SIX4Q9UIU6 781 aa23.52■■□□□ 1.36
RCCD1-202ENST00000554302 DENND4CQ5VZ89 1909 aa23.51■■□□□ 1.35
RCCD1-202ENST00000554302 SOBPA7XYQ1 873 aa23.51■■□□□ 1.35
RCCD1-202ENST00000554302 KIAA0391O15091 583 aaKnown RBP23.51■■□□□ 1.35
RCCD1-202ENST00000554302 PPP6R2O75170 966 aa23.51■■□□□ 1.35
RCCD1-202ENST00000554302 KPNA1P52294 538 aaPredicted RBP23.51■■□□□ 1.35
RCCD1-202ENST00000554302 NLRP12P59046 1061 aa23.51■■□□□ 1.35
RCCD1-202ENST00000554302 PLCB2Q00722 1185 aa23.51■■□□□ 1.35
RCCD1-202ENST00000554302 PPP2R5DQ14738 602 aa23.51■■□□□ 1.35
RCCD1-202ENST00000554302 CMTM8Q8IZV2 173 aa23.51■■□□□ 1.35
RCCD1-202ENST00000554302 GPD1LQ8N335 351 aa23.51■■□□□ 1.35
RCCD1-202ENST00000554302 SPEM1Q8N4L4 309 aa23.51■■□□□ 1.35
RCCD1-202ENST00000554302 GLIS3Q8NEA6 775 aa23.51■■□□□ 1.35
RCCD1-202ENST00000554302 FAM84AQ96KN4 292 aa23.51■■□□□ 1.35
RCCD1-202ENST00000554302 GCNAQ96QF7 691 aa23.51■■□□□ 1.35
RCCD1-202ENST00000554302 PCIF1Q9H4Z3 704 aa23.51■■□□□ 1.35
RCCD1-202ENST00000554302 ABCB6Q9NP58 842 aa23.51■■□□□ 1.35
RCCD1-202ENST00000554302 DDX43Q9NXZ2 648 aaKnown RBP23.51■■□□□ 1.35
RCCD1-202ENST00000554302 SMG5Q9UPR3 1016 aaKnown RBP23.51■■□□□ 1.35
RCCD1-202ENST00000554302 GABRDO14764 452 aa23.5■■□□□ 1.35
RCCD1-202ENST00000554302 HUS1O60921 280 aa23.5■■□□□ 1.35
RCCD1-202ENST00000554302 PAPSS2O95340 614 aaPredicted RBP23.5■■□□□ 1.35
RCCD1-202ENST00000554302 HOXD13P35453 343 aa23.5■■□□□ 1.35
RCCD1-202ENST00000554302 LRRC32Q14392 662 aa23.5■■□□□ 1.35
RCCD1-202ENST00000554302 TAF12Q16514 161 aa23.5■■□□□ 1.35
RCCD1-202ENST00000554302 INTS6LQ5JSJ4 861 aaKnown RBP23.5■■□□□ 1.35
RCCD1-202ENST00000554302 LIMS2Q7Z4I7 341 aa23.5■■□□□ 1.35
RCCD1-202ENST00000554302 OSTM1Q86WC4 334 aa23.5■■□□□ 1.35
RCCD1-202ENST00000554302 CSGALNACT2Q8N6G5 542 aa23.5■■□□□ 1.35
RCCD1-202ENST00000554302 CELF5Q8N6W0 485 aaKnown RBP23.5■■□□□ 1.35
RCCD1-202ENST00000554302 PI4K2AQ9BTU6 479 aa23.5■■□□□ 1.35
RCCD1-202ENST00000554302 SPTLC2O15270 562 aa23.49■■□□□ 1.35
RCCD1-202ENST00000554302 CSH1P0DML2 217 aa23.49■■□□□ 1.35
RCCD1-202ENST00000554302 CSH2P0DML3 217 aa23.49■■□□□ 1.35
RCCD1-202ENST00000554302 DDX6P26196 483 aaKnown RBP eCLIP23.49■■□□□ 1.35
RCCD1-202ENST00000554302 CXCL12P48061 93 aa23.49■■□□□ 1.35
RCCD1-202ENST00000554302 GPR15P49685 360 aa23.49■■□□□ 1.35
RCCD1-202ENST00000554302 RBP5P82980 135 aa23.49■■□□□ 1.35
RCCD1-202ENST00000554302 SATB1Q01826 763 aa23.49■■□□□ 1.35
RCCD1-202ENST00000554302 STK38Q15208 465 aa23.49■■□□□ 1.35
RCCD1-202ENST00000554302 DGKKQ5KSL6 1271 aa23.49■■□□□ 1.35
RCCD1-202ENST00000554302 CNNM4Q6P4Q7 775 aa23.49■■□□□ 1.35
RCCD1-202ENST00000554302 TOP6BLQ8N6T0 577 aa23.49■■□□□ 1.35
RCCD1-202ENST00000554302 TRIM9Q9C026 710 aa23.49■■□□□ 1.35
RCCD1-202ENST00000554302 MTMR12Q9C0I1 747 aa23.49■■□□□ 1.35
RCCD1-202ENST00000554302 LRRC27Q9C0I9 530 aa23.49■■□□□ 1.35
RCCD1-202ENST00000554302 SMG9Q9H0W8 520 aaKnown RBP23.49■■□□□ 1.35
RCCD1-202ENST00000554302 CUEDC2Q9H467 287 aa23.49■■□□□ 1.35
RCCD1-202ENST00000554302 RBM12Q9NTZ6 932 aaKnown RBP23.49■■□□□ 1.35
RCCD1-202ENST00000554302 INTS13Q9NVM9 706 aa23.49■■□□□ 1.35
RCCD1-202ENST00000554302 DLL3Q9NYJ7 618 aa23.49■■□□□ 1.35
RCCD1-202ENST00000554302 NCDNQ9UBB6 729 aa23.49■■□□□ 1.35
RCCD1-202ENST00000554302 OBSL1O75147 1896 aa23.49■■□□□ 1.35
RCCD1-202ENST00000554302 CEP250Q9BV73 2442 aa23.49■■□□□ 1.35
RCCD1-202ENST00000554302 PRPF40AO75400 957 aaKnown RBP23.48■■□□□ 1.35
RCCD1-202ENST00000554302 MYL7Q01449 175 aa23.48■■□□□ 1.35
RCCD1-202ENST00000554302 TNK2Q07912 1038 aa23.48■■□□□ 1.35
RCCD1-202ENST00000554302 BFSP1Q12934 665 aa23.48■■□□□ 1.35
RCCD1-202ENST00000554302 CCINQ13939 588 aa23.48■■□□□ 1.35
RCCD1-202ENST00000554302 STXBP4Q6ZWJ1 553 aa23.48■■□□□ 1.35
RCCD1-202ENST00000554302 EPM2AIP1Q7L775 607 aaPredicted RBP23.48■■□□□ 1.35
RCCD1-202ENST00000554302 GPR161Q8N6U8 529 aaKnown RBP23.48■■□□□ 1.35
RCCD1-202ENST00000554302 TTC8Q8TAM2 541 aa23.48■■□□□ 1.35
RCCD1-202ENST00000554302 HPS3Q969F9 1004 aa23.48■■□□□ 1.35
RCCD1-202ENST00000554302 TRMT2BQ96GJ1 504 aaKnown RBP23.48■■□□□ 1.35
RCCD1-202ENST00000554302 MYRFLQ96LU7 910 aa23.48■■□□□ 1.35
RCCD1-202ENST00000554302 FAM83CQ9BQN1 747 aa23.48■■□□□ 1.35
RCCD1-202ENST00000554302 SNX9Q9Y5X1 595 aa23.48■■□□□ 1.35
RCCD1-202ENST00000554302 PTPRJQ12913 1337 aa23.48■■□□□ 1.35
RCCD1-202ENST00000554302 NOL4O94818 638 aa23.47■■□□□ 1.35
RCCD1-202ENST00000554302 TMEM191BP0C7N4 346 aa23.47■■□□□ 1.35
RCCD1-202ENST00000554302 TGM1P22735 817 aa23.47■■□□□ 1.35
RCCD1-202ENST00000554302 ACAT1P24752 427 aaKnown RBP23.47■■□□□ 1.35
RCCD1-202ENST00000554302 LHX1P48742 406 aa23.47■■□□□ 1.35
RCCD1-202ENST00000554302 SOWAHAQ2M3V2 549 aa23.47■■□□□ 1.35
RCCD1-202ENST00000554302 CFAP221Q4G0U5 840 aa23.47■■□□□ 1.35
RCCD1-202ENST00000554302 DPH6Q7L8W6 267 aa23.47■■□□□ 1.35
RCCD1-202ENST00000554302 MAB21L3Q8N8X9 362 aa23.47■■□□□ 1.35
RCCD1-202ENST00000554302 OR5B17Q8NGF7 314 aa23.47■■□□□ 1.35
RCCD1-202ENST00000554302 USP13Q92995 863 aaPredicted RBP23.47■■□□□ 1.35
RCCD1-202ENST00000554302 THG1LQ9NWX6 298 aaKnown RBP23.47■■□□□ 1.35
RCCD1-202ENST00000554302 GTF3C4Q9UKN8 822 aa23.47■■□□□ 1.35
RCCD1-202ENST00000554302 CCL26Q9Y258 94 aa23.47■■□□□ 1.35
RCCD1-202ENST00000554302 ZNF233A6NK53 670 aa23.46■■□□□ 1.35
RCCD1-202ENST00000554302 K7ESF4 209 aa23.46■■□□□ 1.35
RCCD1-202ENST00000554302 EIF3DO15371 548 aaKnown RBP eCLIP23.46■■□□□ 1.35
RCCD1-202ENST00000554302 TADA3O75528 432 aa23.46■■□□□ 1.35
RCCD1-202ENST00000554302 YEATS4O95619 227 aa23.46■■□□□ 1.35
RCCD1-202ENST00000554302 KRT19P08727 400 aa23.46■■□□□ 1.35
RCCD1-202ENST00000554302 CYP2F1P24903 491 aa23.46■■□□□ 1.35
RCCD1-202ENST00000554302 AVPR1AP37288 418 aa23.46■■□□□ 1.35
RCCD1-202ENST00000554302 RPL10AP62906 217 aaKnown RBP23.46■■□□□ 1.35
RCCD1-202ENST00000554302 PUM1Q14671 1186 aaKnown RBP eCLIP23.46■■□□□ 1.35
RCCD1-202ENST00000554302 SURF1Q15526 300 aa23.46■■□□□ 1.35
RCCD1-202ENST00000554302 ITPRIPL2Q3MIP1 535 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms