RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 A0A1B0GUA9 196 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 FAM181BA6NEQ2 426 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 HEPACAM2A8MVW5 462 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 ZBTB42B2RXF5 422 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 H0YCG3 227 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 H7C4K7 107 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 PSMA7O14818 248 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 ADCY5O95622 1261 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 RPLP2P05387 115 aaKnown RBP2.67□□□□□ -1.98
PRPF39-205ENST00000554081 CCDC130P13994 396 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 LMO2P25791 158 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 MAT2AP31153 395 aaKnown RBP2.67□□□□□ -1.98
PRPF39-205ENST00000554081 LONP1P36776 959 aaKnown RBP2.67□□□□□ -1.98
PRPF39-205ENST00000554081 CLK2P49760 499 aaKnown RBP2.67□□□□□ -1.98
PRPF39-205ENST00000554081 MRE11P49959 708 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 RBP5P82980 135 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 ST3GAL1Q11201 340 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 STK4Q13043 487 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 SIM2Q14190 667 aaPredicted RBP2.67□□□□□ -1.98
PRPF39-205ENST00000554081 SNRNP35Q16560 246 aaKnown RBP2.67□□□□□ -1.98
PRPF39-205ENST00000554081 SLC10A6Q3KNW5 377 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 TDRD12Q587J7 1177 aaKnown RBP2.67□□□□□ -1.98
PRPF39-205ENST00000554081 EMC10Q5UCC4 262 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 C1orf53Q5VUE5 145 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 RNF219Q5W0B1 726 aaPredicted RBP2.67□□□□□ -1.98
PRPF39-205ENST00000554081 SLFN12LQ6IEE8 588 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 SDE2Q6IQ49 451 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 ANKRD54Q6NXT1 300 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 CAVIN1Q6NZI2 390 aaKnown RBP2.67□□□□□ -1.98
PRPF39-205ENST00000554081 TMEM270Q6UE05 265 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 NIPA1Q7RTP0 329 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 RD3Q7Z3Z2 195 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 CCDC50Q8IVM0 306 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 ADHFE1Q8IWW8 467 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 FAM186BQ8IYM0 893 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 DCP1BQ8IZD4 617 aaKnown RBP2.67□□□□□ -1.98
PRPF39-205ENST00000554081 FBXL6Q8N531 539 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 SLC43A3Q8NBI5 491 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 XXYLT1Q8NBI6 393 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 C3orf58Q8NDZ4 430 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 ANKRD20A12PQ8NF67 263 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 RDM1Q8NG50 284 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 OR5B17Q8NGF7 314 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 SETD7Q8WTS6 366 aaKnown RBP2.67□□□□□ -1.98
PRPF39-205ENST00000554081 EMID1Q96A84 441 aaPredicted RBP2.67□□□□□ -1.98
PRPF39-205ENST00000554081 NAF1Q96HR8 494 aaKnown RBP2.67□□□□□ -1.98
PRPF39-205ENST00000554081 KCNK16Q96T55 309 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 ACO2Q99798 780 aaKnown RBP2.67□□□□□ -1.98
PRPF39-205ENST00000554081 SYT15Q9BQS2 421 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 SRRTQ9BXP5 876 aaKnown RBP2.67□□□□□ -1.98
PRPF39-205ENST00000554081 SEZ6LQ9BYH1 1024 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 FGFBP2Q9BYJ0 223 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 SFXN1Q9H9B4 322 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 UBN1Q9NPG3 1134 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 CHST12Q9NRB3 414 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 THG1LQ9NWX6 298 aaKnown RBP2.67□□□□□ -1.98
PRPF39-205ENST00000554081 FAM8A1Q9UBU6 413 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 LHX6Q9UPM6 363 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 PCDHB5Q9Y5E4 795 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 DOCK1Q14185 1865 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 CFAP47Q6ZTR5 3102 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 ITIH6Q6UXX5 1313 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 WDR27A2RRH5 827 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 EIF4E1BA6NMX2 242 aaKnown RBP2.67□□□□□ -1.98
PRPF39-205ENST00000554081 NEDD8-MDP1E9PL57 170 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 GOLGA6L19H0YKK7 550 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 KCNK3O14649 394 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 PTGESO14684 152 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 NCK2O43639 380 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 TBC1D4O60343 1298 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 SRGAP2O75044 1071 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 GADD45BO75293 160 aaPredicted RBP2.67□□□□□ -1.98
PRPF39-205ENST00000554081 GLP2RO95838 553 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 SERPINC1P01008 464 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 CXCL10P02778 98 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 P4HA1P13674 534 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 HOXB8P17481 243 aaPredicted RBP2.67□□□□□ -1.98
PRPF39-205ENST00000554081 CEBPBP17676 345 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 SPINK2P20155 84 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 RPL13P26373 211 aaKnown RBP2.67□□□□□ -1.98
PRPF39-205ENST00000554081 AVPR2P30518 371 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 LTBRP36941 435 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 LILRA4P59901 499 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 ATP2C1P98194 919 aaPredicted RBP2.67□□□□□ -1.98
PRPF39-205ENST00000554081 TAF10Q12962 218 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 NR1H3Q13133 447 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 ADAM15Q13444 863 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 SMAD4Q13485 552 aaKnown RBP2.67□□□□□ -1.98
PRPF39-205ENST00000554081 NCOA4Q13772 614 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 CAMK1Q14012 370 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 GIT2Q14161 759 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 IL17AQ16552 155 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 DCAF4L1Q3SXM0 396 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 SLC44A4Q53GD3 710 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 CFAP58Q5T655 872 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 RWDD4Q6NW29 188 aaKnown RBP2.67□□□□□ -1.98
PRPF39-205ENST00000554081 TRIM67Q6ZTA4 783 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 DENND5BQ6ZUT9 1274 aa2.67□□□□□ -1.98
PRPF39-205ENST00000554081 TMEFF1Q8IYR6 380 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms