RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 NMT2O60551 498 aa3.76□□□□□ -1.81
SLIRP-202ENST00000553981 GLRX3O76003 335 aaKnown RBP3.76□□□□□ -1.81
SLIRP-202ENST00000553981 ARIH2O95376 493 aa3.76□□□□□ -1.81
SLIRP-202ENST00000553981 SLC25A27O95847 323 aa3.76□□□□□ -1.81
SLIRP-202ENST00000553981 FGBP02675 491 aa3.76□□□□□ -1.81
SLIRP-202ENST00000553981 AMY2AP04746 511 aa3.76□□□□□ -1.81
SLIRP-202ENST00000553981 CA3P07451 260 aa3.76□□□□□ -1.81
SLIRP-202ENST00000553981 CT47B1P0C2W7 299 aaPredicted RBP3.76□□□□□ -1.81
SLIRP-202ENST00000553981 AMY2BP19961 511 aa3.76□□□□□ -1.81
SLIRP-202ENST00000553981 TGM1P22735 817 aa3.76□□□□□ -1.81
SLIRP-202ENST00000553981 ADCY8P40145 1251 aa3.76□□□□□ -1.81
SLIRP-202ENST00000553981 DEFB103AP81534 67 aa3.76□□□□□ -1.81
SLIRP-202ENST00000553981 ARID5AQ03989 594 aa3.76□□□□□ -1.81
SLIRP-202ENST00000553981 PPIGQ13427 754 aaKnown RBP eCLIP3.76□□□□□ -1.81
SLIRP-202ENST00000553981 ITGA7Q13683 1181 aa3.76□□□□□ -1.81
SLIRP-202ENST00000553981 GPR19Q15760 415 aa3.76□□□□□ -1.81
SLIRP-202ENST00000553981 C20orf194Q5TEA3 1177 aa3.76□□□□□ -1.81
SLIRP-202ENST00000553981 FNDC7Q5VTL7 733 aa3.76□□□□□ -1.81
SLIRP-202ENST00000553981 USP30Q70CQ3 517 aa3.76□□□□□ -1.81
SLIRP-202ENST00000553981 DPH6Q7L8W6 267 aa3.76□□□□□ -1.81
SLIRP-202ENST00000553981 CXXC5Q7LFL8 322 aaKnown RBP3.76□□□□□ -1.81
SLIRP-202ENST00000553981 DEFB128Q7Z7B8 93 aa3.76□□□□□ -1.81
SLIRP-202ENST00000553981 LRRC47Q8N1G4 583 aaKnown RBP3.76□□□□□ -1.81
SLIRP-202ENST00000553981 MB21D1Q8N884 522 aa3.76□□□□□ -1.81
SLIRP-202ENST00000553981 ST13P5Q8NFI4 369 aaPredicted RBP3.76□□□□□ -1.81
SLIRP-202ENST00000553981 NEU4Q8WWR8 484 aaPredicted RBP3.76□□□□□ -1.81
SLIRP-202ENST00000553981 TBC1D5Q92609 795 aa3.76□□□□□ -1.81
SLIRP-202ENST00000553981 FAM122AQ96E09 287 aa3.76□□□□□ -1.81
SLIRP-202ENST00000553981 CEP95Q96GE4 821 aa3.76□□□□□ -1.81
SLIRP-202ENST00000553981 STRBPQ96SI9 672 aaKnown RBP3.76□□□□□ -1.81
SLIRP-202ENST00000553981 DNAJC2Q99543 621 aaKnown RBP3.76□□□□□ -1.81
SLIRP-202ENST00000553981 SLF1Q9BQI6 1058 aa3.76□□□□□ -1.81
SLIRP-202ENST00000553981 NOL10Q9BSC4 688 aaKnown RBP3.76□□□□□ -1.81
SLIRP-202ENST00000553981 TLR9Q9NR96 1032 aa3.76□□□□□ -1.81
SLIRP-202ENST00000553981 IL17RBQ9NRM6 502 aa3.76□□□□□ -1.81
SLIRP-202ENST00000553981 GALNT8Q9NY28 637 aa3.76□□□□□ -1.81
SLIRP-202ENST00000553981 PUF60Q9UHX1 559 aaKnown RBP3.76□□□□□ -1.81
SLIRP-202ENST00000553981 FBXO10Q9UK96 956 aa3.76□□□□□ -1.81
SLIRP-202ENST00000553981 FAM184BQ9ULE4 1060 aa3.76□□□□□ -1.81
SLIRP-202ENST00000553981 TANC1Q9C0D5 1861 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 COL4A6Q14031 1691 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 XIRP2A4UGR9 3374 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 A0A087X1B8 175 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.75□□□□□ -1.81
SLIRP-202ENST00000553981 PI4K2BG5E9Z4 385 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 WNT9AO14904 365 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 NBNO60934 754 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 IQCF3P0C7M6 154 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 LINC00271P0C7V0 271 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 AOAHP28039 575 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 MC4RP32245 332 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 GJA4P35212 333 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 MSX2P35548 267 aaPredicted RBP3.75□□□□□ -1.81
SLIRP-202ENST00000553981 INHBCP55103 352 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 TNFAIP2Q03169 654 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 PAK1Q13153 545 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 OS9Q13438 667 aaPredicted RBP3.75□□□□□ -1.81
SLIRP-202ENST00000553981 TUBA3CQ13748 450 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 KCTD2Q14681 263 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 EIF4HQ15056 248 aaKnown RBP3.75□□□□□ -1.81
SLIRP-202ENST00000553981 STILQ15468 1287 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 SBK1Q52WX2 424 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 ZKSCAN2Q63HK3 967 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 TRIM68Q6AZZ1 485 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 TUBA3EQ6PEY2 450 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 PSRC1Q6PGN9 363 aaPredicted RBP3.75□□□□□ -1.81
SLIRP-202ENST00000553981 MTDHQ86UE4 582 aaKnown RBP3.75□□□□□ -1.81
SLIRP-202ENST00000553981 TLK2Q86UE8 772 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 OSTM1Q86WC4 334 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 PTRH1Q86Y79 214 aaKnown RBP3.75□□□□□ -1.81
SLIRP-202ENST00000553981 ITPRIPQ8IWB1 547 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 GPR135Q8IZ08 494 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 OTUD7AQ8TE49 926 aaPredicted RBP3.75□□□□□ -1.81
SLIRP-202ENST00000553981 MORC4Q8TE76 937 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 GDPD5Q8WTR4 605 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 KAT2BQ92831 832 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 MKL1Q969V6 931 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 GLT1D1Q96MS3 346 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 CRNKL1Q9BZJ0 848 aaKnown RBP3.75□□□□□ -1.81
SLIRP-202ENST00000553981 ALDH8A1Q9H2A2 487 aaPredicted RBP3.75□□□□□ -1.81
SLIRP-202ENST00000553981 ABHD16BQ9H3Z7 469 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 HIPK3Q9H422 1215 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 MMRN2Q9H8L6 949 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 MSL2Q9HCI7 577 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 HOMER2Q9NSB8 354 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 PAG1Q9NWQ8 432 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 MTMR4Q9NYA4 1195 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 PLA2G3Q9NZ20 509 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 NYAP2Q9P242 653 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 CLIP2Q9UDT6 1046 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 SWAP70Q9UH65 585 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 CDC42EP3Q9UKI2 254 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 ATP23Q9Y6H3 246 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 SLC4A4Q9Y6R1 1079 aa3.75□□□□□ -1.81
SLIRP-202ENST00000553981 CUL9Q8IWT3 2517 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 CHD7Q9P2D1 2997 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 MPIG6BO95866 241 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 C4BPAP04003 597 aaKnown RBP3.74□□□□□ -1.81
SLIRP-202ENST00000553981 PYGMP11217 842 aa3.74□□□□□ -1.81
SLIRP-202ENST00000553981 ATP2A2P16615 1042 aaKnown RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms