RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 GOLGA7BQ2TAP0 167 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 RTP2Q5QGT7 225 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 PPP2R2DQ66LE6 453 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 HGSNATQ68CP4 663 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 ANKS3Q6ZW76 656 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 LIMS2Q7Z4I7 341 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 DDX53Q86TM3 631 aaKnown RBP10.38□□□□□ -0.75
CHD8-204ENST00000553622 OR10T2Q8NGX3 314 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 SPATA18Q8TC71 538 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 ZNF606Q8WXB4 792 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 TFAP2BQ92481 460 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 CLP1Q92989 425 aaKnown RBP10.38□□□□□ -0.75
CHD8-204ENST00000553622 TMEM209Q96SK2 561 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 HERC2P3Q9BVR0 1158 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 ALG13Q9NP73 1137 aaKnown RBP10.38□□□□□ -0.75
CHD8-204ENST00000553622 SPTLC3Q9NUV7 552 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 NOCTQ9UK39 431 aaKnown RBP10.38□□□□□ -0.75
CHD8-204ENST00000553622 CEP83Q9Y592 693 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.38□□□□□ -0.75
CHD8-204ENST00000553622 MYBPHLA2RUH7 354 aa10.37□□□□□ -0.75
CHD8-204ENST00000553622 CPB1P15086 417 aa10.37□□□□□ -0.75
CHD8-204ENST00000553622 CHRNB2P17787 502 aa10.37□□□□□ -0.75
CHD8-204ENST00000553622 RPL17P18621 184 aaKnown RBP10.37□□□□□ -0.75
CHD8-204ENST00000553622 BMP8BP34820 402 aa10.37□□□□□ -0.75
CHD8-204ENST00000553622 GFPT1Q06210 699 aaPredicted RBP10.37□□□□□ -0.75
CHD8-204ENST00000553622 SPA17Q15506 151 aa10.37□□□□□ -0.75
CHD8-204ENST00000553622 SLC39A12Q504Y0 691 aa10.37□□□□□ -0.75
CHD8-204ENST00000553622 INTS6LQ5JSJ4 861 aaKnown RBP10.37□□□□□ -0.75
CHD8-204ENST00000553622 PPP1R26Q5T8A7 1209 aaPredicted RBP10.37□□□□□ -0.75
CHD8-204ENST00000553622 KIAA0319Q5VV43 1072 aa10.37□□□□□ -0.75
CHD8-204ENST00000553622 RAD9BQ6WBX8 426 aa10.37□□□□□ -0.75
CHD8-204ENST00000553622 SPRED2Q7Z698 418 aa10.37□□□□□ -0.75
CHD8-204ENST00000553622 TMEM139Q8IV31 216 aa10.37□□□□□ -0.75
CHD8-204ENST00000553622 DCP1BQ8IZD4 617 aaKnown RBP10.37□□□□□ -0.75
CHD8-204ENST00000553622 FBXO22Q8NEZ5 403 aa10.37□□□□□ -0.75
CHD8-204ENST00000553622 UBA3Q8TBC4 463 aa10.37□□□□□ -0.75
CHD8-204ENST00000553622 SLC2A14Q8TDB8 520 aa10.37□□□□□ -0.75
CHD8-204ENST00000553622 AUTS2Q8WXX7 1259 aa10.37□□□□□ -0.75
CHD8-204ENST00000553622 CYFIP2Q96F07 1278 aa10.37□□□□□ -0.75
CHD8-204ENST00000553622 TGS1Q96RS0 853 aaKnown RBP10.37□□□□□ -0.75
CHD8-204ENST00000553622 RTP3Q9BQQ7 232 aa10.37□□□□□ -0.75
CHD8-204ENST00000553622 ACBD6Q9BR61 282 aa10.37□□□□□ -0.75
CHD8-204ENST00000553622 DESI2Q9BSY9 194 aa10.37□□□□□ -0.75
CHD8-204ENST00000553622 PLVAPQ9BX97 442 aa10.37□□□□□ -0.75
CHD8-204ENST00000553622 PBX4Q9BYU1 374 aa10.37□□□□□ -0.75
CHD8-204ENST00000553622 CRTAC1Q9NQ79 661 aa10.37□□□□□ -0.75
CHD8-204ENST00000553622 ENTPD7Q9NQZ7 604 aa10.37□□□□□ -0.75
CHD8-204ENST00000553622 HESX1Q9UBX0 185 aa10.37□□□□□ -0.75
CHD8-204ENST00000553622 ADAMTS1Q9UHI8 967 aa10.37□□□□□ -0.75
CHD8-204ENST00000553622 GTF3C4Q9UKN8 822 aa10.37□□□□□ -0.75
CHD8-204ENST00000553622 KIAA1257Q9ULG3 409 aa10.37□□□□□ -0.75
CHD8-204ENST00000553622 GREB1Q4ZG55 1949 aa10.37□□□□□ -0.75
CHD8-204ENST00000553622 ATP8B3O60423 1300 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 A0A087X0T9 212 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 SSU72P8A0A1W2PR75 194 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 OR6C75A6NL08 312 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 O00370 1275 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 CLDN5O00501 218 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 DDX3XO00571 662 aaKnown RBP eCLIP10.36□□□□□ -0.751e-7■□□□□ 11
CHD8-204ENST00000553622 ARHGAP6O43182 974 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 LPXNO60711 386 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 MICAL2O94851 1124 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 OAZ2O95190 189 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 CFHP08603 1231 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 LINC00271P0C7V0 271 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 FAM228BP0C875 321 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 FECHP22830 423 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 FMO1Q01740 532 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 TAP1Q03518 808 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 MAPK8IP2Q13387 824 aaPredicted RBP10.36□□□□□ -0.75
CHD8-204ENST00000553622 BMS1Q14692 1282 aaKnown RBP10.36□□□□□ -0.75
CHD8-204ENST00000553622 CCDC122Q5T0U0 273 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 NAA35Q5VZE5 725 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 PLPP4Q5VZY2 271 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 DENND1BQ6P3S1 775 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 TRIM72Q6ZMU5 477 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 TOGARAM2Q6ZUX3 1019 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 TMC7Q7Z402 723 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 KIAA1328Q86T90 577 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 ZNF677Q86XU0 584 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 SPATA2LQ8IUW3 424 aaPredicted RBP10.36□□□□□ -0.75
CHD8-204ENST00000553622 CCDC170Q8IYT3 715 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 CRYBG2Q8N1P7 616 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 ACRBPQ8NEB7 543 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 LNX1Q8TBB1 728 aaPredicted RBP10.36□□□□□ -0.75
CHD8-204ENST00000553622 MICAL1Q8TDZ2 1067 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 ARNTL2Q8WYA1 636 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 DDX1Q92499 740 aaKnown RBP10.36□□□□□ -0.75
CHD8-204ENST00000553622 MYLPFQ96A32 169 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 PGLYRP2Q96PD5 576 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 ZSWIM1Q9BR11 485 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 C11orf84Q9BUA3 381 aaPredicted RBP10.36□□□□□ -0.75
CHD8-204ENST00000553622 B3GNT5Q9BYG0 378 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 SLC28A3Q9HAS3 691 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 MRPL17Q9NRX2 175 aaKnown RBP10.36□□□□□ -0.75
CHD8-204ENST00000553622 KRT82Q9NSB4 513 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 ABI2Q9NYB9 513 aaPredicted RBP10.36□□□□□ -0.75
CHD8-204ENST00000553622 TSPAN16Q9UKR8 245 aa10.36□□□□□ -0.75
CHD8-204ENST00000553622 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.36□□□□□ -0.75
CHD8-204ENST00000553622 CDY1Q9Y6F8 540 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms