RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 TOB2Q14106 344 aaPredicted RBP15□□□□□ -0.01
PRPF39-204ENST00000553605 ZNF268Q14587 947 aaPredicted RBP15□□□□□ -0.01
PRPF39-204ENST00000553605 MTF1Q14872 753 aa15□□□□□ -0.01
PRPF39-204ENST00000553605 TXNDC8Q6A555 127 aa15□□□□□ -0.01
PRPF39-204ENST00000553605 MPZL3Q6UWV2 235 aa15□□□□□ -0.01
PRPF39-204ENST00000553605 WHAMMQ8TF30 809 aa15□□□□□ -0.01
PRPF39-204ENST00000553605 OSCP1Q8WVF1 389 aa15□□□□□ -0.01
PRPF39-204ENST00000553605 ATP2A3Q93084 1043 aa15□□□□□ -0.01
PRPF39-204ENST00000553605 ZNF274Q96GC6 653 aaPredicted RBP15□□□□□ -0.01
PRPF39-204ENST00000553605 MTMR9Q96QG7 549 aa15□□□□□ -0.01
PRPF39-204ENST00000553605 PLXNB3Q9ULL4 1909 aa15□□□□□ -0.01
PRPF39-204ENST00000553605 ACACAQ13085 2346 aa14.99□□□□□ -0.01
PRPF39-204ENST00000553605 KIAA1549LQ6ZVL6 1849 aa14.99□□□□□ -0.01
PRPF39-204ENST00000553605 TNRC6BQ9UPQ9 1833 aaKnown RBP14.99□□□□□ -0.01
PRPF39-204ENST00000553605 PHLPP2Q6ZVD8 1323 aa14.99□□□□□ -0.01
PRPF39-204ENST00000553605 CITO14578 2027 aa14.99□□□□□ -0.01
PRPF39-204ENST00000553605 ASXL3Q9C0F0 2248 aa14.99□□□□□ -0.01
PRPF39-204ENST00000553605 ANTXRLA6NF34 631 aa14.99□□□□□ -0.01
PRPF39-204ENST00000553605 CCDC169A6NNP5 214 aa14.99□□□□□ -0.01
PRPF39-204ENST00000553605 ABLIM1O14639 778 aa14.99□□□□□ -0.01
PRPF39-204ENST00000553605 SH3BP5O60239 455 aa14.99□□□□□ -0.01
PRPF39-204ENST00000553605 NEMFO60524 1076 aa14.99□□□□□ -0.01
PRPF39-204ENST00000553605 IFNAR2P48551 515 aa14.99□□□□□ -0.01
PRPF39-204ENST00000553605 SPAG1Q07617 926 aa14.99□□□□□ -0.01
PRPF39-204ENST00000553605 NR1H3Q13133 447 aa14.99□□□□□ -0.01
PRPF39-204ENST00000553605 STK3Q13188 491 aa14.99□□□□□ -0.01
PRPF39-204ENST00000553605 NR5A1Q13285 461 aa14.99□□□□□ -0.01
PRPF39-204ENST00000553605 DMP1Q13316 513 aaPredicted RBP14.99□□□□□ -0.01
PRPF39-204ENST00000553605 BYSLQ13895 437 aaKnown RBP14.99□□□□□ -0.01
PRPF39-204ENST00000553605 SLC39A12Q504Y0 691 aa14.99□□□□□ -0.01
PRPF39-204ENST00000553605 SEZ6Q53EL9 994 aa14.99□□□□□ -0.01
PRPF39-204ENST00000553605 TMEM92Q6UXU6 159 aa14.99□□□□□ -0.01
PRPF39-204ENST00000553605 MON1AQ86VX9 555 aa14.99□□□□□ -0.01
PRPF39-204ENST00000553605 OR2I1PQ8NGU4 316 aa14.99□□□□□ -0.01
PRPF39-204ENST00000553605 UBL7Q96S82 380 aaPredicted RBP14.99□□□□□ -0.01
PRPF39-204ENST00000553605 LARP6Q9BRS8 491 aaKnown RBP14.99□□□□□ -0.01
PRPF39-204ENST00000553605 TMEM134Q9H6X4 195 aa14.99□□□□□ -0.01
PRPF39-204ENST00000553605 CAPN10Q9HC96 672 aa14.99□□□□□ -0.01
PRPF39-204ENST00000553605 DNAAF2Q9NVR5 837 aaKnown RBP14.99□□□□□ -0.01
PRPF39-204ENST00000553605 ADAMTS9Q9P2N4 1935 aa14.99□□□□□ -0.01
PRPF39-204ENST00000553605 TK2O00142 265 aa14.98□□□□□ -0.01
PRPF39-204ENST00000553605 ARHGAP33O14559 1287 aa14.98□□□□□ -0.01
PRPF39-204ENST00000553605 HNRNPLP14866 589 aaKnown RBP eCLIP14.98□□□□□ -0.01
PRPF39-204ENST00000553605 PEX3P56589 373 aa14.98□□□□□ -0.01
PRPF39-204ENST00000553605 SLC14A1Q13336 389 aa14.98□□□□□ -0.01
PRPF39-204ENST00000553605 EML3Q32P44 896 aa14.98□□□□□ -0.01
PRPF39-204ENST00000553605 MAP7D1Q3KQU3 841 aa14.98□□□□□ -0.01
PRPF39-204ENST00000553605 TAS1R3Q7RTX0 852 aa14.98□□□□□ -0.01
PRPF39-204ENST00000553605 TTC16Q8NEE8 873 aa14.98□□□□□ -0.01
PRPF39-204ENST00000553605 OR10T2Q8NGX3 314 aa14.98□□□□□ -0.01
PRPF39-204ENST00000553605 MRPS31Q92665 395 aaKnown RBP14.98□□□□□ -0.01
PRPF39-204ENST00000553605 CRELD1Q96HD1 420 aa14.98□□□□□ -0.01
PRPF39-204ENST00000553605 ZBTB45Q96K62 511 aaPredicted RBP14.98□□□□□ -0.01
PRPF39-204ENST00000553605 BCCIPQ9P287 314 aaKnown RBP eCLIP14.98□□□□□ -0.01
PRPF39-204ENST00000553605 DKK4Q9UBT3 224 aa14.98□□□□□ -0.01
PRPF39-204ENST00000553605 APOBEC2Q9Y235 224 aaKnown RBP14.98□□□□□ -0.01
PRPF39-204ENST00000553605 WNT6Q9Y6F9 365 aa14.98□□□□□ -0.01
PRPF39-204ENST00000553605 GON4LQ3T8J9 2241 aa14.98□□□□□ -0.01
PRPF39-204ENST00000553605 PTPRDP23468 1912 aa14.98□□□□□ -0.01
PRPF39-204ENST00000553605 APC2O95996 2303 aa14.97□□□□□ -0.01
PRPF39-204ENST00000553605 ZNF638Q14966 1978 aaKnown RBP14.97□□□□□ -0.01
PRPF39-204ENST00000553605 C1QL1O75973 258 aa14.97□□□□□ -0.01
PRPF39-204ENST00000553605 SYPP08247 313 aa14.97□□□□□ -0.01
PRPF39-204ENST00000553605 ODC1P11926 461 aa14.97□□□□□ -0.01
PRPF39-204ENST00000553605 HMGA1P17096 107 aaKnown RBP14.97□□□□□ -0.01
PRPF39-204ENST00000553605 CYP3A5P20815 502 aa14.97□□□□□ -0.01
PRPF39-204ENST00000553605 RPA1P27694 616 aa14.97□□□□□ -0.01
PRPF39-204ENST00000553605 NPTX2P47972 431 aa14.97□□□□□ -0.01
PRPF39-204ENST00000553605 MRPS21P82921 87 aaKnown RBP14.97□□□□□ -0.01
PRPF39-204ENST00000553605 FAM160A1Q05DH4 1040 aa14.97□□□□□ -0.01
PRPF39-204ENST00000553605 NBR1Q14596 966 aa14.97□□□□□ -0.01
PRPF39-204ENST00000553605 ZBTB6Q15916 424 aa14.97□□□□□ -0.01
PRPF39-204ENST00000553605 TOGARAM2Q6ZUX3 1019 aa14.97□□□□□ -0.01
PRPF39-204ENST00000553605 RABEPKQ7Z6M1 372 aa14.97□□□□□ -0.01
PRPF39-204ENST00000553605 SLC39A7Q92504 469 aa14.97□□□□□ -0.01
PRPF39-204ENST00000553605 ZCWPW1Q9H0M4 648 aa14.97□□□□□ -0.01
PRPF39-204ENST00000553605 PLEKHA5Q9HAU0 1116 aa14.97□□□□□ -0.01
PRPF39-204ENST00000553605 POLMQ9NP87 494 aaPredicted RBP14.97□□□□□ -0.01
PRPF39-204ENST00000553605 UBQLN1Q9UMX0 589 aaKnown RBP14.97□□□□□ -0.01
PRPF39-204ENST00000553605 URB1O60287 2271 aaKnown RBP14.97□□□□□ -0.01
PRPF39-204ENST00000553605 WNT7AO00755 349 aa14.96□□□□□ -0.01
PRPF39-204ENST00000553605 AP5Z1O43299 807 aa14.96□□□□□ -0.01
PRPF39-204ENST00000553605 CDKL5O76039 1030 aa14.96□□□□□ -0.01
PRPF39-204ENST00000553605 HAPLN1P10915 354 aaPredicted RBP14.96□□□□□ -0.01
PRPF39-204ENST00000553605 PLA2G2AP14555 144 aa14.96□□□□□ -0.01
PRPF39-204ENST00000553605 KRT2P35908 639 aa14.96□□□□□ -0.01
PRPF39-204ENST00000553605 OPRD1P41143 372 aa14.96□□□□□ -0.01
PRPF39-204ENST00000553605 ZNF77Q15935 545 aa14.96□□□□□ -0.01
PRPF39-204ENST00000553605 BMP2KLQ5H9B9 411 aa14.96□□□□□ -0.01
PRPF39-204ENST00000553605 RUFY3Q7L099 469 aa14.96□□□□□ -0.01
PRPF39-204ENST00000553605 ZNF605Q86T29 641 aa14.96□□□□□ -0.01
PRPF39-204ENST00000553605 EFCAB13Q8IY85 973 aa14.96□□□□□ -0.01
PRPF39-204ENST00000553605 PGBD3Q8N328 593 aa14.96□□□□□ -0.01
PRPF39-204ENST00000553605 DEFB119Q8N690 84 aa14.96□□□□□ -0.01
PRPF39-204ENST00000553605 ALLCQ8N6M5 410 aa14.96□□□□□ -0.01
PRPF39-204ENST00000553605 TXNDC5Q8NBS9 432 aaKnown RBP14.96□□□□□ -0.01
PRPF39-204ENST00000553605 C2orf15Q8WU43 125 aaKnown RBP14.96□□□□□ -0.01
PRPF39-204ENST00000553605 TNFRSF25Q93038 417 aa14.96□□□□□ -0.01
PRPF39-204ENST00000553605 SENP8Q96LD8 212 aa14.96□□□□□ -0.01
PRPF39-204ENST00000553605 LINC00597Q9H2U6 94 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms