RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-222	ENST00000553570	BMP2KL	Q5H9B9	411 aa		5.42	□□□□□ -1.54
ATXN3-222	ENST00000553570	MCTP2	Q6DN12	878 aa		5.42	□□□□□ -1.54
ATXN3-222	ENST00000553570	CCDC174	Q6PII3	467 aa		5.42	□□□□□ -1.54
ATXN3-222	ENST00000553570	FBXO46	Q6PJ61	603 aa	Predicted RBP	5.42	□□□□□ -1.54
ATXN3-222	ENST00000553570	DPP9	Q86TI2	863 aa		5.42	□□□□□ -1.54
ATXN3-222	ENST00000553570	TBC1D10C	Q8IV04	446 aa		5.42	□□□□□ -1.54
ATXN3-222	ENST00000553570	CMIP	Q8IY22	773 aa		5.42	□□□□□ -1.54
ATXN3-222	ENST00000553570	CBARP	Q8N350	705 aa	Predicted RBP	5.42	□□□□□ -1.54
ATXN3-222	ENST00000553570	DTX3	Q8N9I9	347 aa		5.42	□□□□□ -1.54
ATXN3-222	ENST00000553570	ZNF610	Q8N9Z0	462 aa		5.42	□□□□□ -1.54
ATXN3-222	ENST00000553570	NCOA7	Q8NI08	942 aa		5.42	□□□□□ -1.54
ATXN3-222	ENST00000553570	CHURC1	Q8WUH1	139 aa		5.42	□□□□□ -1.54
ATXN3-222	ENST00000553570	PIBF1	Q8WXW3	757 aa		5.42	□□□□□ -1.54
ATXN3-222	ENST00000553570	ZCCHC14	Q8WYQ9	949 aa	Known RBP	5.42	□□□□□ -1.54
ATXN3-222	ENST00000553570	LPAR1	Q92633	364 aa		5.42	□□□□□ -1.54
ATXN3-222	ENST00000553570	MBD6	Q96DN6	1003 aa		5.42	□□□□□ -1.54
ATXN3-222	ENST00000553570	AHCYL2	Q96HN2	611 aa	Known RBP	5.42	□□□□□ -1.54
ATXN3-222	ENST00000553570	C16orf92	Q96LL3	132 aa		5.42	□□□□□ -1.54
ATXN3-222	ENST00000553570	ZSWIM3	Q96MP5	696 aa		5.42	□□□□□ -1.54
ATXN3-222	ENST00000553570	TMEM209	Q96SK2	561 aa		5.42	□□□□□ -1.54
ATXN3-222	ENST00000553570	MENT	Q9BUN1	341 aa		5.42	□□□□□ -1.54
ATXN3-222	ENST00000553570	IL25	Q9H293	177 aa		5.42	□□□□□ -1.54
ATXN3-222	ENST00000553570	TXNRD2	Q9NNW7	524 aa		5.42	□□□□□ -1.54
ATXN3-222	ENST00000553570	IL17RB	Q9NRM6	502 aa		5.42	□□□□□ -1.54
ATXN3-222	ENST00000553570	TOPORS	Q9NS56	1045 aa	Predicted RBP	5.42	□□□□□ -1.54
ATXN3-222	ENST00000553570	ANAPC4	Q9UJX5	808 aa		5.42	□□□□□ -1.54
ATXN3-222	ENST00000553570	DOCK5	Q9H7D0	1870 aa		5.42	□□□□□ -1.54
ATXN3-222	ENST00000553570		E7EWF7	191 aa		5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	MME	P08473	750 aa		5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	CYP21A2	P08686	494 aa		5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	GOLGA8H	P0CJ92	632 aa		5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	CTGF	P29279	349 aa		5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	FLT3LG	P49771	235 aa		5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	GJA9	P57773	515 aa		5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	PRKCZ	Q05513	592 aa		5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	INAVA	Q3KP66	663 aa		5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	CCDC178	Q5BJE1	867 aa		5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	IFIT1B	Q5T764	474 aa	Known RBP	5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	TMC5	Q6UXY8	1006 aa		5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	CYB5R4	Q7L1T6	521 aa		5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	PLEKHH3	Q7Z736	793 aa		5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	RASSF3	Q86WH2	238 aa		5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	NUP133	Q8WUM0	1156 aa		5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	ASB15	Q8WXK1	588 aa		5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	MAP4K1	Q92918	833 aa		5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	RBM15	Q96T37	977 aa	Known RBP eCLIP	5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	SLF1	Q9BQI6	1058 aa		5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	TMEM47	Q9BQJ4	181 aa		5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	ZDHHC5	Q9C0B5	715 aa		5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	UBA5	Q9GZZ9	404 aa		5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	PORCN	Q9H237	461 aa		5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	RAVER2	Q9HCJ3	691 aa	Known RBP	5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	C14orf119	Q9NWQ9	140 aa		5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	BTBD7	Q9P203	1132 aa		5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	SRRD	Q9UH36	339 aa		5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	FEM1B	Q9UK73	627 aa		5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	RABGAP1	Q9Y3P9	1069 aa		5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	NOC2L	Q9Y3T9	749 aa	Known RBP	5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	TNKS	O95271	1327 aa		5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	NEDD4	P46934	1319 aa		5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	RAD50	Q92878	1312 aa		5.41	□□□□□ -1.54
ATXN3-222	ENST00000553570	MROH6	A6NGR9	719 aa		5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	CCDC69	A6NI79	296 aa		5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	VWA5A	O00534	786 aa		5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	FBXO21	O94952	628 aa		5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	TFRC	P02786	760 aa	Known RBP	5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	PC	P11498	1178 aa	Known RBP	5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	FCER1A	P12319	257 aa		5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	ALAS1	P13196	640 aa		5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	ZKSCAN1	P17029	563 aa	Predicted RBP	5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	CD40	P25942	277 aa		5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	MAPK4	P31152	587 aa		5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	CNR2	P34972	360 aa		5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	FNTB	P49356	437 aa		5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	NEK2	P51955	445 aa		5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	STAT2	P52630	851 aa		5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	PRMT2	P55345	433 aa		5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	UBXN2A	P68543	259 aa		5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	MCL1	Q07820	350 aa		5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	DBP	Q10586	325 aa	Predicted RBP	5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	WTAP	Q15007	396 aa		5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	PDCD1	Q15116	288 aa		5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	EPHA7	Q15375	998 aa		5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	FAM110C	Q1W6H9	321 aa		5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	CD276	Q5ZPR3	534 aa		5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	SNRNP48	Q6IEG0	339 aa	Known RBP	5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	SYNE3	Q6ZMZ3	975 aa		5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	GPR142	Q7Z601	462 aa		5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	RAB11FIP4	Q86YS3	637 aa		5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	ANKRD35	Q8N283	1001 aa		5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	FOXRED1	Q96CU9	486 aa	Predicted RBP	5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	C12orf42	Q96LP6	360 aa		5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	TTC14	Q96N46	770 aa		5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	CLIC6	Q96NY7	704 aa		5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	MOV10L1	Q9BXT6	1211 aa	Known RBP	5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	LRRC2	Q9BYS8	371 aa		5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	LSG1	Q9H089	658 aa	Known RBP	5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	SPATC1L	Q9H0A9	340 aa		5.4	□□□□□ -1.54
ATXN3-222	ENST00000553570	CPVL	Q9H3G5	476 aa		5.4	□□□□□ -1.54

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