RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 ARNTLO00327 626 aa8.02□□□□□ -1.13
ATXN3-219ENST00000553488 CCNT1O60563 726 aaKnown RBP8.02□□□□□ -1.13
ATXN3-219ENST00000553488 MMP20O60882 483 aa8.02□□□□□ -1.13
ATXN3-219ENST00000553488 PAPSS2O95340 614 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-219ENST00000553488 THP07101 528 aa8.02□□□□□ -1.13
ATXN3-219ENST00000553488 RETP07949 1114 aa8.02□□□□□ -1.13
ATXN3-219ENST00000553488 SPATA31C1P0DKV0 1188 aa8.02□□□□□ -1.13
ATXN3-219ENST00000553488 TKTP29401 623 aaKnown RBP8.02□□□□□ -1.13
ATXN3-219ENST00000553488 CCR2P41597 374 aa8.02□□□□□ -1.13
ATXN3-219ENST00000553488 RBM25P49756 843 aaKnown RBP8.02□□□□□ -1.13
ATXN3-219ENST00000553488 IRX6P78412 446 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-219ENST00000553488 SATB1Q01826 763 aa8.02□□□□□ -1.13
ATXN3-219ENST00000553488 ROR1Q01973 937 aa8.02□□□□□ -1.13
ATXN3-219ENST00000553488 DMWDQ09019 674 aa8.02□□□□□ -1.13
ATXN3-219ENST00000553488 NCBP1Q09161 790 aaKnown RBP8.02□□□□□ -1.13
ATXN3-219ENST00000553488 GRM2Q14416 872 aa8.02□□□□□ -1.13
ATXN3-219ENST00000553488 FAM78AQ5JUQ0 283 aa8.02□□□□□ -1.13
ATXN3-219ENST00000553488 PRR23CQ6ZRP0 262 aa8.02□□□□□ -1.13
ATXN3-219ENST00000553488 CD163Q86VB7 1156 aa8.02□□□□□ -1.13
ATXN3-219ENST00000553488 CELF5Q8N6W0 485 aaKnown RBP8.02□□□□□ -1.13
ATXN3-219ENST00000553488 BSNDQ8WZ55 320 aa8.02□□□□□ -1.13
ATXN3-219ENST00000553488 TCEAL4Q96EI5 215 aa8.02□□□□□ -1.13
ATXN3-219ENST00000553488 ASB16Q96NS5 453 aa8.02□□□□□ -1.13
ATXN3-219ENST00000553488 PPP1R10Q96QC0 940 aaKnown RBP8.02□□□□□ -1.13
ATXN3-219ENST00000553488 ARID3AQ99856 593 aa8.02□□□□□ -1.13
ATXN3-219ENST00000553488 EIF2AK1Q9BQI3 630 aaKnown RBP8.02□□□□□ -1.13
ATXN3-219ENST00000553488 CCDC113Q9H0I3 377 aa8.02□□□□□ -1.13
ATXN3-219ENST00000553488 FZD8Q9H461 694 aa8.02□□□□□ -1.13
ATXN3-219ENST00000553488 GPRC5CQ9NQ84 441 aa8.02□□□□□ -1.13
ATXN3-219ENST00000553488 TRPV5Q9NQA5 729 aa8.02□□□□□ -1.13
ATXN3-219ENST00000553488 SEMA4GQ9NTN9 838 aa8.02□□□□□ -1.13
ATXN3-219ENST00000553488 ANKEF1Q9NU02 776 aa8.02□□□□□ -1.13
ATXN3-219ENST00000553488 SNTG2Q9NY99 539 aa8.02□□□□□ -1.13
ATXN3-219ENST00000553488 NDRG2Q9UN36 371 aaKnown RBP8.02□□□□□ -1.13
ATXN3-219ENST00000553488 BACE2Q9Y5Z0 518 aa8.02□□□□□ -1.13
ATXN3-219ENST00000553488 MYH11P35749 1972 aa8.02□□□□□ -1.13
ATXN3-219ENST00000553488 WDR27A2RRH5 827 aa8.01□□□□□ -1.13
ATXN3-219ENST00000553488 LRRIQ4A6NIV6 560 aa8.01□□□□□ -1.13
ATXN3-219ENST00000553488 C1QTNF9BB2RNN3 333 aa8.01□□□□□ -1.13
ATXN3-219ENST00000553488 K7ESF4 209 aa8.01□□□□□ -1.13
ATXN3-219ENST00000553488 MAN2B1O00754 1011 aa8.01□□□□□ -1.13
ATXN3-219ENST00000553488 N4BP3O15049 544 aa8.01□□□□□ -1.13
ATXN3-219ENST00000553488 USO1O60763 962 aaKnown RBP8.01□□□□□ -1.13
ATXN3-219ENST00000553488 MOSPD3O75425 235 aa8.01□□□□□ -1.13
ATXN3-219ENST00000553488 ABLIM3O94929 683 aa8.01□□□□□ -1.13
ATXN3-219ENST00000553488 CHRNB1P11230 501 aa8.01□□□□□ -1.13
ATXN3-219ENST00000553488 PMLP29590 882 aa8.01□□□□□ -1.13
ATXN3-219ENST00000553488 CHRNA4P43681 627 aa8.01□□□□□ -1.13
ATXN3-219ENST00000553488 CCR3P51677 355 aa8.01□□□□□ -1.13
ATXN3-219ENST00000553488 CLCNKBP51801 687 aa8.01□□□□□ -1.13
ATXN3-219ENST00000553488 CSRP2Q16527 193 aa8.01□□□□□ -1.13
ATXN3-219ENST00000553488 GLRA4Q5JXX5 417 aa8.01□□□□□ -1.13
ATXN3-219ENST00000553488 PERM1Q5SV97 790 aa8.01□□□□□ -1.13
ATXN3-219ENST00000553488 EEF1DP3Q658K8 133 aa8.01□□□□□ -1.13
ATXN3-219ENST00000553488 SLC8B1Q6J4K2 584 aa8.01□□□□□ -1.13
ATXN3-219ENST00000553488 VITQ6UXI7 678 aa8.01□□□□□ -1.13
ATXN3-219ENST00000553488 PRR23BQ6ZRT6 265 aa8.01□□□□□ -1.13
ATXN3-219ENST00000553488 PIK3AP1Q6ZUJ8 805 aa8.01□□□□□ -1.13
ATXN3-219ENST00000553488 FAM35AQ86V20 835 aa8.01□□□□□ -1.13
ATXN3-219ENST00000553488 NOSTRINQ8IVI9 506 aa8.01□□□□□ -1.13
ATXN3-219ENST00000553488 TPH2Q8IWU9 490 aa8.01□□□□□ -1.13
ATXN3-219ENST00000553488 SLFN12Q8IYM2 578 aa8.01□□□□□ -1.13
ATXN3-219ENST00000553488 YTHDC1Q96MU7 727 aaKnown RBP8.01□□□□□ -1.13
ATXN3-219ENST00000553488 BRD9Q9H8M2 597 aa8.01□□□□□ -1.13
ATXN3-219ENST00000553488 GOLGA2P5Q9HBQ8 144 aa8.01□□□□□ -1.13
ATXN3-219ENST00000553488 ZNF334Q9HCZ1 680 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-219ENST00000553488 GJB4Q9NTQ9 266 aa8.01□□□□□ -1.13
ATXN3-219ENST00000553488 RAB23Q9ULC3 237 aa8.01□□□□□ -1.13
ATXN3-219ENST00000553488 PIAS3Q9Y6X2 628 aa8.01□□□□□ -1.13
ATXN3-219ENST00000553488 STK36Q9NRP7 1315 aa8.01□□□□□ -1.13
ATXN3-219ENST00000553488 ZNF638Q14966 1978 aaKnown RBP8.01□□□□□ -1.13
ATXN3-219ENST00000553488 I3L4J1 428 aa8□□□□□ -1.13
ATXN3-219ENST00000553488 MSTNO14793 375 aa8□□□□□ -1.13
ATXN3-219ENST00000553488 SEC24AO95486 1093 aa8□□□□□ -1.13
ATXN3-219ENST00000553488 PTPN2P17706 415 aa8□□□□□ -1.13
ATXN3-219ENST00000553488 HOXC13P31276 330 aa8□□□□□ -1.13
ATXN3-219ENST00000553488 BRCC3P46736 316 aa8□□□□□ -1.13
ATXN3-219ENST00000553488 SHC2P98077 582 aa8□□□□□ -1.13
ATXN3-219ENST00000553488 PLAURQ03405 335 aa8□□□□□ -1.13
ATXN3-219ENST00000553488 SOX4Q06945 474 aaPredicted RBP8□□□□□ -1.13
ATXN3-219ENST00000553488 SRSF5Q13243 272 aaKnown RBP8□□□□□ -1.13
ATXN3-219ENST00000553488 UPP1Q16831 310 aa8□□□□□ -1.13
ATXN3-219ENST00000553488 ANKS3Q6ZW76 656 aa8□□□□□ -1.13
ATXN3-219ENST00000553488 RUFY3Q7L099 469 aa8□□□□□ -1.13
ATXN3-219ENST00000553488 TCEAL8Q8IYN2 117 aa8□□□□□ -1.13
ATXN3-219ENST00000553488 ZNF461Q8TAF7 563 aa8□□□□□ -1.13
ATXN3-219ENST00000553488 PIGOQ8TEQ8 1089 aa8□□□□□ -1.13
ATXN3-219ENST00000553488 DEPDC1BQ8WUY9 529 aa8□□□□□ -1.13
ATXN3-219ENST00000553488 NUDT8Q8WV74 236 aa8□□□□□ -1.13
ATXN3-219ENST00000553488 FAM3CQ92520 227 aa8□□□□□ -1.13
ATXN3-219ENST00000553488 RSPRY1Q96DX4 576 aa8□□□□□ -1.13
ATXN3-219ENST00000553488 ZNF274Q96GC6 653 aaPredicted RBP8□□□□□ -1.13
ATXN3-219ENST00000553488 ZSWIM3Q96MP5 696 aa8□□□□□ -1.13
ATXN3-219ENST00000553488 NAP1L4Q99733 375 aaKnown RBP8□□□□□ -1.13
ATXN3-219ENST00000553488 TRMT61BQ9BVS5 477 aaKnown RBP8□□□□□ -1.13
ATXN3-219ENST00000553488 LMAN1LQ9HAT1 526 aa8□□□□□ -1.13
ATXN3-219ENST00000553488 TRPV4Q9HBA0 871 aa8□□□□□ -1.13
ATXN3-219ENST00000553488 ZFP14Q9HCL3 533 aa8□□□□□ -1.13
ATXN3-219ENST00000553488 C2orf42Q9NWW7 574 aa8□□□□□ -1.13
ATXN3-219ENST00000553488 RALYQ9UKM9 306 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms