RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 C4orf50Q6ZRC1 276 aa19.72■□□□□ 0.75
CPSF2-202ENST00000553427 CCDC150Q8NCX0 1101 aa19.72■□□□□ 0.75
CPSF2-202ENST00000553427 FBXL13Q8NEE6 735 aa19.72■□□□□ 0.75
CPSF2-202ENST00000553427 KHSRPQ92945 711 aaKnown RBP eCLIP19.72■□□□□ 0.75
CPSF2-202ENST00000553427 PSMG2Q969U7 264 aa19.72■□□□□ 0.75
CPSF2-202ENST00000553427 NOTCH4Q99466 2003 aa19.72■□□□□ 0.75
CPSF2-202ENST00000553427 BCO2Q9BYV7 579 aa19.72■□□□□ 0.75
CPSF2-202ENST00000553427 NIF3L1Q9GZT8 377 aa19.72■□□□□ 0.75
CPSF2-202ENST00000553427 FAM124BQ9H5Z6 455 aaPredicted RBP19.72■□□□□ 0.75
CPSF2-202ENST00000553427 CRTAC1Q9NQ79 661 aa19.72■□□□□ 0.75
CPSF2-202ENST00000553427 GTF3C4Q9UKN8 822 aa19.72■□□□□ 0.75
CPSF2-202ENST00000553427 CDH7Q9ULB5 785 aa19.72■□□□□ 0.75
CPSF2-202ENST00000553427 DOCK8Q8NF50 2099 aa19.72■□□□□ 0.75
CPSF2-202ENST00000553427 MYBPHLA2RUH7 354 aa19.71■□□□□ 0.75
CPSF2-202ENST00000553427 LAMP2P13473 410 aa19.71■□□□□ 0.75
CPSF2-202ENST00000553427 ATF6P18850 670 aa19.71■□□□□ 0.75
CPSF2-202ENST00000553427 GBP2P32456 591 aaPredicted RBP19.71■□□□□ 0.75
CPSF2-202ENST00000553427 STX17P56962 302 aa19.71■□□□□ 0.75
CPSF2-202ENST00000553427 NLRP12P59046 1061 aa19.71■□□□□ 0.75
CPSF2-202ENST00000553427 PTPN21Q16825 1174 aa19.71■□□□□ 0.75
CPSF2-202ENST00000553427 MGAT5BQ3V5L5 792 aa19.71■□□□□ 0.75
CPSF2-202ENST00000553427 CCDC40Q4G0X9 1142 aa19.71■□□□□ 0.75
CPSF2-202ENST00000553427 CBWD6Q4V339 395 aa19.71■□□□□ 0.75
CPSF2-202ENST00000553427 CBWD3Q5JTY5 395 aa19.71■□□□□ 0.75
CPSF2-202ENST00000553427 CBWD5Q5RIA9 395 aa19.71■□□□□ 0.75
CPSF2-202ENST00000553427 TCERG1LQ5VWI1 586 aa19.71■□□□□ 0.75
CPSF2-202ENST00000553427 ITIH5Q86UX2 942 aa19.71■□□□□ 0.75
CPSF2-202ENST00000553427 OR6B3Q8NGW1 331 aa19.71■□□□□ 0.75
CPSF2-202ENST00000553427 ITFG1Q8TB96 612 aa19.71■□□□□ 0.75
CPSF2-202ENST00000553427 MYCBPAPQ8TBZ2 947 aa19.71■□□□□ 0.75
CPSF2-202ENST00000553427 FGF13Q92913 245 aa19.71■□□□□ 0.75
CPSF2-202ENST00000553427 NXPE3Q969Y0 559 aa19.71■□□□□ 0.75
CPSF2-202ENST00000553427 CEP295NLQ96MC4 621 aa19.71■□□□□ 0.75
CPSF2-202ENST00000553427 SEPT5Q99719 369 aaPredicted RBP19.71■□□□□ 0.75
CPSF2-202ENST00000553427 CORO1BQ9BR76 489 aa19.71■□□□□ 0.75
CPSF2-202ENST00000553427 LRRC3Q9BY71 257 aa19.71■□□□□ 0.75
CPSF2-202ENST00000553427 MMRN2Q9H8L6 949 aa19.71■□□□□ 0.75
CPSF2-202ENST00000553427 CYP3A43Q9HB55 503 aa19.71■□□□□ 0.75
CPSF2-202ENST00000553427 APOBEC3GQ9HC16 384 aaKnown RBP19.71■□□□□ 0.75
CPSF2-202ENST00000553427 ASAH2Q9NR71 780 aa19.71■□□□□ 0.75
CPSF2-202ENST00000553427 RAB20Q9NX57 234 aa19.71■□□□□ 0.75
CPSF2-202ENST00000553427 GDE1Q9NZC3 331 aa19.71■□□□□ 0.75
CPSF2-202ENST00000553427 DACH1Q9UI36 760 aa19.71■□□□□ 0.75
CPSF2-202ENST00000553427 MUTYHQ9UIF7 546 aa19.71■□□□□ 0.75
CPSF2-202ENST00000553427 MRPS23Q9Y3D9 190 aaKnown RBP19.71■□□□□ 0.75
CPSF2-202ENST00000553427 ERCC5P28715 1186 aaPredicted RBP19.7■□□□□ 0.74
CPSF2-202ENST00000553427 PSMC1P62191 440 aaKnown RBP19.7■□□□□ 0.74
CPSF2-202ENST00000553427 INCA1Q0VD86 236 aa19.7■□□□□ 0.74
CPSF2-202ENST00000553427 VEPH1Q14D04 833 aa19.7■□□□□ 0.74
CPSF2-202ENST00000553427 SLC5A9Q2M3M2 681 aa19.7■□□□□ 0.74
CPSF2-202ENST00000553427 DPCR1Q3MIW9 517 aa19.7■□□□□ 0.74
CPSF2-202ENST00000553427 CYP4A22Q5TCH4 519 aa19.7■□□□□ 0.74
CPSF2-202ENST00000553427 SPOPLQ6IQ16 392 aa19.7■□□□□ 0.74
CPSF2-202ENST00000553427 SCARA5Q6ZMJ2 495 aa19.7■□□□□ 0.74
CPSF2-202ENST00000553427 PDZD4Q76G19 769 aaPredicted RBP19.7■□□□□ 0.74
CPSF2-202ENST00000553427 UNC93AQ86WB7 457 aa19.7■□□□□ 0.74
CPSF2-202ENST00000553427 TMC8Q8IU68 726 aa19.7■□□□□ 0.74
CPSF2-202ENST00000553427 SPATA2LQ8IUW3 424 aaPredicted RBP19.7■□□□□ 0.74
CPSF2-202ENST00000553427 TRIM59Q8IWR1 403 aa19.7■□□□□ 0.74
CPSF2-202ENST00000553427 NPAS3Q8IXF0 933 aa19.7■□□□□ 0.74
CPSF2-202ENST00000553427 B3GALNT2Q8NCR0 500 aa19.7■□□□□ 0.74
CPSF2-202ENST00000553427 SEMA4DQ92854 862 aa19.7■□□□□ 0.74
CPSF2-202ENST00000553427 MYLPFQ96A32 169 aa19.7■□□□□ 0.74
CPSF2-202ENST00000553427 MED15Q96RN5 788 aa19.7■□□□□ 0.74
CPSF2-202ENST00000553427 PI4K2AQ9BTU6 479 aa19.7■□□□□ 0.74
CPSF2-202ENST00000553427 SDCBP2Q9H190 292 aa19.7■□□□□ 0.74
CPSF2-202ENST00000553427 IGSF9Q9P2J2 1179 aa19.7■□□□□ 0.74
CPSF2-202ENST00000553427 DOCK6Q96HP0 2047 aa19.69■□□□□ 0.74
CPSF2-202ENST00000553427 A8MXQ7 604 aa19.69■□□□□ 0.74
CPSF2-202ENST00000553427 ANHXE9PGG2 379 aa19.69■□□□□ 0.74
CPSF2-202ENST00000553427 P4HA2O15460 535 aa19.69■□□□□ 0.74
CPSF2-202ENST00000553427 ATP2C2O75185 946 aa19.69■□□□□ 0.74
CPSF2-202ENST00000553427 SOAT2O75908 522 aa19.69■□□□□ 0.74
CPSF2-202ENST00000553427 CLSTN1O94985 981 aa19.69■□□□□ 0.74
CPSF2-202ENST00000553427 FGF19O95750 216 aa19.69■□□□□ 0.74
CPSF2-202ENST00000553427 PDGFRBP09619 1106 aa19.69■□□□□ 0.74
CPSF2-202ENST00000553427 PTPN1P18031 435 aaKnown RBP19.69■□□□□ 0.74
CPSF2-202ENST00000553427 CDH8P55286 799 aa19.69■□□□□ 0.74
CPSF2-202ENST00000553427 RPL10AP62906 217 aaKnown RBP19.69■□□□□ 0.74
CPSF2-202ENST00000553427 CCDC142Q17RM4 750 aa19.69■□□□□ 0.74
CPSF2-202ENST00000553427 VSTM1Q6UX27 236 aa19.69■□□□□ 0.74
CPSF2-202ENST00000553427 DNAJB7Q7Z6W7 309 aaPredicted RBP19.69■□□□□ 0.74
CPSF2-202ENST00000553427 TNIP3Q96KP6 325 aa19.69■□□□□ 0.74
CPSF2-202ENST00000553427 SRRTQ9BXP5 876 aaKnown RBP19.69■□□□□ 0.74
CPSF2-202ENST00000553427 LIMD1Q9UGP4 676 aa19.69■□□□□ 0.74
CPSF2-202ENST00000553427 SORCS3Q9UPU3 1222 aa19.69■□□□□ 0.74
CPSF2-202ENST00000553427 TRIOO75962 3097 aa19.68■□□□□ 0.74
CPSF2-202ENST00000553427 CCDC192P0DO97 292 aa19.68■□□□□ 0.74
CPSF2-202ENST00000553427 CCR2P41597 374 aa19.68■□□□□ 0.74
CPSF2-202ENST00000553427 RAP1GAPP47736 663 aa19.68■□□□□ 0.74
CPSF2-202ENST00000553427 FMO5P49326 533 aa19.68■□□□□ 0.74
CPSF2-202ENST00000553427 HS6ST3Q8IZP7 471 aa19.68■□□□□ 0.74
CPSF2-202ENST00000553427 TTC39CQ8N584 583 aa19.68■□□□□ 0.74
CPSF2-202ENST00000553427 ELMO3Q96BJ8 720 aa19.68■□□□□ 0.74
CPSF2-202ENST00000553427 PCED1BQ96HM7 432 aa19.68■□□□□ 0.74
CPSF2-202ENST00000553427 DPEP3Q9H4B8 488 aa19.68■□□□□ 0.74
CPSF2-202ENST00000553427 MAGEC2Q9UBF1 373 aaPredicted RBP19.68■□□□□ 0.74
CPSF2-202ENST00000553427 MOSPD3O75425 235 aa19.67■□□□□ 0.74
CPSF2-202ENST00000553427 CEBPBP17676 345 aa19.67■□□□□ 0.74
CPSF2-202ENST00000553427 CYP2F1P24903 491 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms