RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 OSTM1Q86WC4 334 aa16.4■□□□□ 0.22
SHMT2-204ENST00000553324 CCDC150Q8NCX0 1101 aa16.4■□□□□ 0.22
SHMT2-204ENST00000553324 ING5Q8WYH8 240 aa16.4■□□□□ 0.22
SHMT2-204ENST00000553324 ERCC4Q92889 916 aaPredicted RBP16.4■□□□□ 0.22
SHMT2-204ENST00000553324 FGF14Q92915 247 aa16.4■□□□□ 0.22
SHMT2-204ENST00000553324 E2F7Q96AV8 911 aa16.4■□□□□ 0.22
SHMT2-204ENST00000553324 TCEAL4Q96EI5 215 aa16.4■□□□□ 0.22
SHMT2-204ENST00000553324 CEP295NLQ96MC4 621 aa16.4■□□□□ 0.22
SHMT2-204ENST00000553324 GCNAQ96QF7 691 aa16.4■□□□□ 0.22
SHMT2-204ENST00000553324 PKMYT1Q99640 499 aa16.4■□□□□ 0.22
SHMT2-204ENST00000553324 SYT15Q9BQS2 421 aa16.4■□□□□ 0.22
SHMT2-204ENST00000553324 PI4K2AQ9BTU6 479 aa16.4■□□□□ 0.22
SHMT2-204ENST00000553324 LRRC3Q9BY71 257 aa16.4■□□□□ 0.22
SHMT2-204ENST00000553324 IMPG2Q9BZV3 1241 aa16.4■□□□□ 0.22
SHMT2-204ENST00000553324 ZFP14Q9HCL3 533 aa16.4■□□□□ 0.22
SHMT2-204ENST00000553324 TMLHEQ9NVH6 421 aa16.4■□□□□ 0.22
SHMT2-204ENST00000553324 MAN1B1Q9UKM7 699 aa16.4■□□□□ 0.22
SHMT2-204ENST00000553324 FBXL21Q9UKT6 434 aa16.4■□□□□ 0.22
SHMT2-204ENST00000553324 DENND4AQ7Z401 1863 aa16.39■□□□□ 0.22
SHMT2-204ENST00000553324 MYBPHLA2RUH7 354 aa16.39■□□□□ 0.21
SHMT2-204ENST00000553324 A8MXQ7 604 aa16.39■□□□□ 0.21
SHMT2-204ENST00000553324 SLC16A3O15427 465 aaKnown RBP16.39■□□□□ 0.21
SHMT2-204ENST00000553324 CSH1P0DML2 217 aa16.39■□□□□ 0.21
SHMT2-204ENST00000553324 CSH2P0DML3 217 aa16.39■□□□□ 0.21
SHMT2-204ENST00000553324 CEBPBP17676 345 aa16.39■□□□□ 0.21
SHMT2-204ENST00000553324 TRIM21P19474 475 aaKnown RBP16.39■□□□□ 0.21
SHMT2-204ENST00000553324 CCNE1P24864 410 aa16.39■□□□□ 0.21
SHMT2-204ENST00000553324 CDC25CP30307 473 aa16.39■□□□□ 0.21
SHMT2-204ENST00000553324 CCR2P41597 374 aa16.39■□□□□ 0.21
SHMT2-204ENST00000553324 MAGEA11P43364 429 aa16.39■□□□□ 0.21
SHMT2-204ENST00000553324 PFKPQ01813 784 aa16.39■□□□□ 0.21
SHMT2-204ENST00000553324 ARHGAP15Q53QZ3 475 aa16.39■□□□□ 0.21
SHMT2-204ENST00000553324 ANKRD40Q6AI12 368 aa16.39■□□□□ 0.21
SHMT2-204ENST00000553324 FOXR2Q6PJQ5 311 aa16.39■□□□□ 0.21
SHMT2-204ENST00000553324 VSTM1Q6UX27 236 aa16.39■□□□□ 0.21
SHMT2-204ENST00000553324 TMC8Q8IU68 726 aa16.39■□□□□ 0.21
SHMT2-204ENST00000553324 FBXL6Q8N531 539 aa16.39■□□□□ 0.21
SHMT2-204ENST00000553324 TTC9BQ8N6N2 239 aa16.39■□□□□ 0.21
SHMT2-204ENST00000553324 MYCBPAPQ8TBZ2 947 aa16.39■□□□□ 0.21
SHMT2-204ENST00000553324 ELSPBP1Q96BH3 223 aa16.39■□□□□ 0.21
SHMT2-204ENST00000553324 FAXDC2Q96IV6 333 aa16.39■□□□□ 0.21
SHMT2-204ENST00000553324 KCNH6Q9H252 994 aa16.39■□□□□ 0.21
SHMT2-204ENST00000553324 MFSD1Q9H3U5 465 aa16.39■□□□□ 0.21
SHMT2-204ENST00000553324 TMEM8AQ9HCN3 771 aa16.39■□□□□ 0.21
SHMT2-204ENST00000553324 SLC2A4RGQ9NR83 387 aa16.39■□□□□ 0.21
SHMT2-204ENST00000553324 A0A1W2PRU2 124 aa16.38■□□□□ 0.21
SHMT2-204ENST00000553324 BICDL2A1A5D9 508 aa16.38■□□□□ 0.21
SHMT2-204ENST00000553324 SOAT2O75908 522 aa16.38■□□□□ 0.21
SHMT2-204ENST00000553324 VNN1O95497 513 aa16.38■□□□□ 0.21
SHMT2-204ENST00000553324 ATF6P18850 670 aa16.38■□□□□ 0.21
SHMT2-204ENST00000553324 CYP2F1P24903 491 aa16.38■□□□□ 0.21
SHMT2-204ENST00000553324 C1orf220Q5T0J3 134 aa16.38■□□□□ 0.21
SHMT2-204ENST00000553324 KRT39Q6A163 491 aa16.38■□□□□ 0.21
SHMT2-204ENST00000553324 CLEC17AQ6ZS10 378 aa16.38■□□□□ 0.21
SHMT2-204ENST00000553324 ZC3H3Q8IXZ2 948 aaKnown RBP16.38■□□□□ 0.21
SHMT2-204ENST00000553324 TRIML1Q8N9V2 468 aa16.38■□□□□ 0.21
SHMT2-204ENST00000553324 GIPC2Q8TF65 315 aa16.38■□□□□ 0.21
SHMT2-204ENST00000553324 SMARCD2Q92925 531 aa16.38■□□□□ 0.21
SHMT2-204ENST00000553324 TNIP3Q96KP6 325 aa16.38■□□□□ 0.21
SHMT2-204ENST00000553324 ASB16Q96NS5 453 aa16.38■□□□□ 0.21
SHMT2-204ENST00000553324 PRRX2Q99811 253 aa16.38■□□□□ 0.21
SHMT2-204ENST00000553324 LPIN3Q9BQK8 851 aa16.38■□□□□ 0.21
SHMT2-204ENST00000553324 MRPL45Q9BRJ2 306 aaKnown RBP16.38■□□□□ 0.21
SHMT2-204ENST00000553324 DNAI2Q9GZS0 605 aa16.38■□□□□ 0.21
SHMT2-204ENST00000553324 ATXN3LQ9H3M9 355 aa16.38■□□□□ 0.21
SHMT2-204ENST00000553324 SLITRK6Q9H5Y7 841 aa16.38■□□□□ 0.21
SHMT2-204ENST00000553324 TRPV4Q9HBA0 871 aa16.38■□□□□ 0.21
SHMT2-204ENST00000553324 METTL14Q9HCE5 456 aaKnown RBP16.38■□□□□ 0.21
SHMT2-204ENST00000553324 EHD2Q9NZN4 543 aa16.38■□□□□ 0.21
SHMT2-204ENST00000553324 UXTQ9UBK9 157 aaPredicted RBP16.38■□□□□ 0.21
SHMT2-204ENST00000553324 MYO10Q9HD67 2058 aa16.38■□□□□ 0.21
SHMT2-204ENST00000553324 SOBPA7XYQ1 873 aa16.37■□□□□ 0.21
SHMT2-204ENST00000553324 MOSPD3O75425 235 aa16.37■□□□□ 0.21
SHMT2-204ENST00000553324 ASS1P00966 412 aaKnown RBP16.37■□□□□ 0.21
SHMT2-204ENST00000553324 PTPN1P18031 435 aaKnown RBP16.37■□□□□ 0.21
SHMT2-204ENST00000553324 GABRR2P28476 465 aa16.37■□□□□ 0.21
SHMT2-204ENST00000553324 PIK3CAP42336 1068 aa16.37■□□□□ 0.21
SHMT2-204ENST00000553324 GCLMP48507 274 aa16.37■□□□□ 0.21
SHMT2-204ENST00000553324 MORC3Q14149 939 aa16.37■□□□□ 0.21
SHMT2-204ENST00000553324 TEAD2Q15562 447 aa16.37■□□□□ 0.21
SHMT2-204ENST00000553324 FAM78AQ5JUQ0 283 aa16.37■□□□□ 0.21
SHMT2-204ENST00000553324 ISM2Q6H9L7 571 aa16.37■□□□□ 0.21
SHMT2-204ENST00000553324 FILIP1Q7Z7B0 1213 aa16.37■□□□□ 0.21
SHMT2-204ENST00000553324 SHKBP1Q8TBC3 707 aa16.37■□□□□ 0.21
SHMT2-204ENST00000553324 CEP63Q96MT8 703 aa16.37■□□□□ 0.21
SHMT2-204ENST00000553324 RPP25Q9BUL9 199 aaKnown RBP16.37■□□□□ 0.21
SHMT2-204ENST00000553324 SMOC2Q9H3U7 446 aa16.37■□□□□ 0.21
SHMT2-204ENST00000553324 KIAA1468Q9P260 1216 aa16.37■□□□□ 0.21
SHMT2-204ENST00000553324 TRIM66O15016 1216 aa16.36■□□□□ 0.21
SHMT2-204ENST00000553324 NARSO43776 548 aaKnown RBP16.36■□□□□ 0.21
SHMT2-204ENST00000553324 ATP2C2O75185 946 aa16.36■□□□□ 0.21
SHMT2-204ENST00000553324 HLA-DRAP01903 254 aa16.36■□□□□ 0.21
SHMT2-204ENST00000553324 CFHP08603 1231 aa16.36■□□□□ 0.21
SHMT2-204ENST00000553324 TRIM49P0CI25 452 aa16.36■□□□□ 0.21
SHMT2-204ENST00000553324 TRIM49CP0CI26 452 aa16.36■□□□□ 0.21
SHMT2-204ENST00000553324 DDX6P26196 483 aaKnown RBP eCLIP16.36■□□□□ 0.21
SHMT2-204ENST00000553324 WEE1P30291 646 aa16.36■□□□□ 0.21
SHMT2-204ENST00000553324 GRIK1P39086 918 aa16.36■□□□□ 0.21
SHMT2-204ENST00000553324 CLCN5P51795 746 aa16.36■□□□□ 0.21
SHMT2-204ENST00000553324 NUBP1P53384 320 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms