RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 MON1AQ86VX9 555 aa10.1□□□□□ -0.79
CHD8-203ENST00000553283 PDCL2Q8N4E4 241 aa10.1□□□□□ -0.79
CHD8-203ENST00000553283 FAM160A2Q8N612 972 aaPredicted RBP10.1□□□□□ -0.79
CHD8-203ENST00000553283 MAB21L3Q8N8X9 362 aa10.1□□□□□ -0.79
CHD8-203ENST00000553283 CACTINQ8WUQ7 758 aaKnown RBP10.1□□□□□ -0.79
CHD8-203ENST00000553283 DNAJC19Q96DA6 116 aa10.1□□□□□ -0.79
CHD8-203ENST00000553283 CNTNAP3BQ96NU0 1288 aa10.1□□□□□ -0.79
CHD8-203ENST00000553283 ACCSQ96QU6 501 aa10.1□□□□□ -0.79
CHD8-203ENST00000553283 ACBD6Q9BR61 282 aa10.1□□□□□ -0.79
CHD8-203ENST00000553283 FAM213AQ9BRX8 229 aa10.1□□□□□ -0.79
CHD8-203ENST00000553283 PI4K2AQ9BTU6 479 aa10.1□□□□□ -0.79
CHD8-203ENST00000553283 CNTNAP3Q9BZ76 1288 aa10.1□□□□□ -0.79
CHD8-203ENST00000553283 MRPL44Q9H9J2 332 aaKnown RBP10.1□□□□□ -0.79
CHD8-203ENST00000553283 KIF9Q9HAQ2 790 aa10.1□□□□□ -0.79
CHD8-203ENST00000553283 HPS4Q9NQG7 708 aa10.1□□□□□ -0.79
CHD8-203ENST00000553283 TDP1Q9NUW8 608 aa10.1□□□□□ -0.79
CHD8-203ENST00000553283 AGAP1Q9UPQ3 857 aa10.1□□□□□ -0.79
CHD8-203ENST00000553283 CCL26Q9Y258 94 aa10.1□□□□□ -0.79
CHD8-203ENST00000553283 SDK1Q7Z5N4 2213 aa10.1□□□□□ -0.79
CHD8-203ENST00000553283 SCN1AP35498 2009 aa10.09□□□□□ -0.79
CHD8-203ENST00000553283 CNOT1A5YKK6 2376 aaKnown RBP10.09□□□□□ -0.79
CHD8-203ENST00000553283 CCDC163A0A0D9SF12 145 aa10.09□□□□□ -0.79
CHD8-203ENST00000553283 OTOL1A6NHN0 477 aaPredicted RBP10.09□□□□□ -0.79
CHD8-203ENST00000553283 MYMKA6NI61 221 aa10.09□□□□□ -0.79
CHD8-203ENST00000553283 TULP1O00294 542 aaPredicted RBP10.09□□□□□ -0.79
CHD8-203ENST00000553283 HUS1O60921 280 aa10.09□□□□□ -0.79
CHD8-203ENST00000553283 LDHAP00338 332 aaKnown RBP10.09□□□□□ -0.79
CHD8-203ENST00000553283 ADRB1P08588 477 aa10.09□□□□□ -0.79
CHD8-203ENST00000553283 GARTP22102 1010 aa10.09□□□□□ -0.79
CHD8-203ENST00000553283 POLR2BP30876 1174 aaKnown RBP10.09□□□□□ -0.79
CHD8-203ENST00000553283 GPR15P49685 360 aa10.09□□□□□ -0.79
CHD8-203ENST00000553283 WNT7BP56706 349 aa10.09□□□□□ -0.79
CHD8-203ENST00000553283 RPL10AP62906 217 aaKnown RBP10.09□□□□□ -0.79
CHD8-203ENST00000553283 AMPD2Q01433 879 aa10.09□□□□□ -0.79
CHD8-203ENST00000553283 BFSP1Q12934 665 aa10.09□□□□□ -0.79
CHD8-203ENST00000553283 ZNF268Q14587 947 aaPredicted RBP10.09□□□□□ -0.79
CHD8-203ENST00000553283 PDGFRLQ15198 375 aa10.09□□□□□ -0.79
CHD8-203ENST00000553283 DDR2Q16832 855 aa10.09□□□□□ -0.79
CHD8-203ENST00000553283 L1TD1Q5T7N2 865 aaKnown RBP10.09□□□□□ -0.79
CHD8-203ENST00000553283 SDHAF4Q5VUM1 108 aa10.09□□□□□ -0.79
CHD8-203ENST00000553283 RRAGBQ5VZM2 374 aa10.09□□□□□ -0.79
CHD8-203ENST00000553283 TRIM68Q6AZZ1 485 aa10.09□□□□□ -0.79
CHD8-203ENST00000553283 CC2D1AQ6P1N0 951 aaPredicted RBP10.09□□□□□ -0.79
CHD8-203ENST00000553283 PKN3Q6P5Z2 889 aa10.09□□□□□ -0.79
CHD8-203ENST00000553283 BRSK2Q8IWQ3 736 aa10.09□□□□□ -0.79
CHD8-203ENST00000553283 TMEM86AQ8N2M4 240 aa10.09□□□□□ -0.79
CHD8-203ENST00000553283 LRRC52Q8N7C0 313 aa10.09□□□□□ -0.79
CHD8-203ENST00000553283 C1orf127Q8N9H9 656 aa10.09□□□□□ -0.79
CHD8-203ENST00000553283 ZSWIM2Q8NEG5 633 aa10.09□□□□□ -0.79
CHD8-203ENST00000553283 CXorf38Q8TB03 319 aa10.09□□□□□ -0.79
CHD8-203ENST00000553283 LEO1Q8WVC0 666 aaPredicted RBP10.09□□□□□ -0.79
CHD8-203ENST00000553283 MRPS31Q92665 395 aaKnown RBP10.09□□□□□ -0.79
CHD8-203ENST00000553283 CHFRQ96EP1 664 aa10.09□□□□□ -0.79
CHD8-203ENST00000553283 SAAL1Q96ER3 474 aa10.09□□□□□ -0.79
CHD8-203ENST00000553283 MYRFLQ96LU7 910 aa10.09□□□□□ -0.79
CHD8-203ENST00000553283 EBF3Q9H4W6 596 aa10.09□□□□□ -0.79
CHD8-203ENST00000553283 UPF2Q9HAU5 1272 aaKnown RBP10.09□□□□□ -0.79
CHD8-203ENST00000553283 ABCB6Q9NP58 842 aa10.09□□□□□ -0.79
CHD8-203ENST00000553283 TBC1D7Q9P0N9 293 aa10.09□□□□□ -0.79
CHD8-203ENST00000553283 FBXO2Q9UK22 296 aaPredicted RBP10.09□□□□□ -0.79
CHD8-203ENST00000553283 L1RE1Q9UN81 338 aa10.09□□□□□ -0.79
CHD8-203ENST00000553283 MAGED2Q9UNF1 606 aaPredicted RBP10.09□□□□□ -0.79
CHD8-203ENST00000553283 PCDHB13Q9Y5F0 798 aa10.09□□□□□ -0.79
CHD8-203ENST00000553283 SRPRBQ9Y5M8 271 aaKnown RBP10.09□□□□□ -0.79
CHD8-203ENST00000553283 CLIC4Q9Y696 253 aa10.09□□□□□ -0.79
CHD8-203ENST00000553283 CHD8Q9HCK8 2581 aa10.09□□□□□ -0.79
CHD8-203ENST00000553283 GDF9O60383 454 aa10.08□□□□□ -0.8
CHD8-203ENST00000553283 RPP40O75818 363 aaKnown RBP10.08□□□□□ -0.8
CHD8-203ENST00000553283 NOL4O94818 638 aa10.08□□□□□ -0.8
CHD8-203ENST00000553283 GCNT3O95395 438 aa10.08□□□□□ -0.8
CHD8-203ENST00000553283 ITGB3P05106 788 aa10.08□□□□□ -0.8
CHD8-203ENST00000553283 CYP2F1P24903 491 aa10.08□□□□□ -0.8
CHD8-203ENST00000553283 PXNP49023 591 aaPredicted RBP10.08□□□□□ -0.8
CHD8-203ENST00000553283 GALK1P51570 392 aa10.08□□□□□ -0.8
CHD8-203ENST00000553283 RBP5P82980 135 aa10.08□□□□□ -0.8
CHD8-203ENST00000553283 MYL7Q01449 175 aa10.08□□□□□ -0.8
CHD8-203ENST00000553283 PPM1JQ5JR12 505 aa10.08□□□□□ -0.8
CHD8-203ENST00000553283 INTS6LQ5JSJ4 861 aaKnown RBP10.08□□□□□ -0.8
CHD8-203ENST00000553283 SCARA3Q6AZY7 606 aa10.08□□□□□ -0.8
CHD8-203ENST00000553283 CACNA2D4Q7Z3S7 1137 aa10.08□□□□□ -0.8
CHD8-203ENST00000553283 SYCP3Q8IZU3 236 aa10.08□□□□□ -0.8
CHD8-203ENST00000553283 CAMKK1Q8N5S9 505 aa10.08□□□□□ -0.8
CHD8-203ENST00000553283 CSGALNACT2Q8N6G5 542 aa10.08□□□□□ -0.8
CHD8-203ENST00000553283 TOP6BLQ8N6T0 577 aa10.08□□□□□ -0.8
CHD8-203ENST00000553283 RIN3Q8TB24 985 aa10.08□□□□□ -0.8
CHD8-203ENST00000553283 SPATA18Q8TC71 538 aa10.08□□□□□ -0.8
CHD8-203ENST00000553283 GAB3Q8WWW8 586 aa10.08□□□□□ -0.8
CHD8-203ENST00000553283 TRMT2BQ96GJ1 504 aaKnown RBP10.08□□□□□ -0.8
CHD8-203ENST00000553283 LOXL4Q96JB6 756 aa10.08□□□□□ -0.8
CHD8-203ENST00000553283 CLIC6Q96NY7 704 aa10.08□□□□□ -0.8
CHD8-203ENST00000553283 PKMYT1Q99640 499 aa10.08□□□□□ -0.8
CHD8-203ENST00000553283 FBRSL1Q9HCM7 1045 aaKnown RBP10.08□□□□□ -0.8
CHD8-203ENST00000553283 OLFML3Q9NRN5 406 aa10.08□□□□□ -0.8
CHD8-203ENST00000553283 GDAP2Q9NXN4 497 aa10.08□□□□□ -0.8
CHD8-203ENST00000553283 DDX43Q9NXZ2 648 aaKnown RBP10.08□□□□□ -0.8
CHD8-203ENST00000553283 RBAKQ9NYW8 714 aaPredicted RBP10.08□□□□□ -0.8
CHD8-203ENST00000553283 UXTQ9UBK9 157 aaPredicted RBP10.08□□□□□ -0.8
CHD8-203ENST00000553283 GTF3C4Q9UKN8 822 aa10.08□□□□□ -0.8
CHD8-203ENST00000553283 ITGA11Q9UKX5 1188 aa10.08□□□□□ -0.8
CHD8-203ENST00000553283 SLC8A2Q9UPR5 921 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms