RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 ELMO3Q96BJ8 720 aa20.65■□□□□ 0.9
PTCH1-227ENST00000553256 ASB16Q96NS5 453 aa20.65■□□□□ 0.9
PTCH1-227ENST00000553256 SDCBP2Q9H190 292 aa20.65■□□□□ 0.9
PTCH1-227ENST00000553256 WNT16Q9UBV4 365 aa20.65■□□□□ 0.9
PTCH1-227ENST00000553256 CDH9Q9ULB4 789 aa20.65■□□□□ 0.9
PTCH1-227ENST00000553256 PCDHB5Q9Y5E4 795 aa20.65■□□□□ 0.9
PTCH1-227ENST00000553256 KMT2EQ8IZD2 1858 aa20.64■□□□□ 0.9
PTCH1-227ENST00000553256 KRBA1A5PL33 1030 aa20.64■□□□□ 0.89
PTCH1-227ENST00000553256 SMC2O95347 1197 aa20.64■□□□□ 0.89
PTCH1-227ENST00000553256 CYP2F1P24903 491 aa20.64■□□□□ 0.89
PTCH1-227ENST00000553256 PCSK1P29120 753 aa20.64■□□□□ 0.89
PTCH1-227ENST00000553256 VAMP7P51809 220 aa20.64■□□□□ 0.89
PTCH1-227ENST00000553256 VCPP55072 806 aaKnown RBP20.64■□□□□ 0.89
PTCH1-227ENST00000553256 CYP4A22Q5TCH4 519 aa20.64■□□□□ 0.89
PTCH1-227ENST00000553256 CWF19L1Q69YN2 538 aaKnown RBP20.64■□□□□ 0.89
PTCH1-227ENST00000553256 ANKRD40Q6AI12 368 aa20.64■□□□□ 0.89
PTCH1-227ENST00000553256 TANGO2Q6ICL3 276 aa20.64■□□□□ 0.89
PTCH1-227ENST00000553256 INTS8Q75QN2 995 aaKnown RBP20.64■□□□□ 0.89
PTCH1-227ENST00000553256 MTSS1LQ765P7 747 aa20.64■□□□□ 0.89
PTCH1-227ENST00000553256 ELMOD1Q8N336 334 aa20.64■□□□□ 0.89
PTCH1-227ENST00000553256 SMARCE1Q969G3 411 aa20.64■□□□□ 0.89
PTCH1-227ENST00000553256 SYAP1Q96A49 352 aaPredicted RBP20.64■□□□□ 0.89
PTCH1-227ENST00000553256 FUBP3Q96I24 572 aaKnown RBP eCLIP20.64■□□□□ 0.89
PTCH1-227ENST00000553256 ABI2Q9NYB9 513 aaPredicted RBP20.64■□□□□ 0.89
PTCH1-227ENST00000553256 FRMD4BQ9Y2L6 1034 aa20.64■□□□□ 0.89
PTCH1-227ENST00000553256 SHISA7A6NL88 538 aa20.63■□□□□ 0.89
PTCH1-227ENST00000553256 PPP1R3GB7ZBB8 358 aa20.63■□□□□ 0.89
PTCH1-227ENST00000553256 TULP1O00294 542 aaPredicted RBP20.63■□□□□ 0.89
PTCH1-227ENST00000553256 LRRN2O75325 713 aa20.63■□□□□ 0.89
PTCH1-227ENST00000553256 ASS1P00966 412 aaKnown RBP20.63■□□□□ 0.89
PTCH1-227ENST00000553256 TRIM49P0CI25 452 aa20.63■□□□□ 0.89
PTCH1-227ENST00000553256 TRIM49CP0CI26 452 aa20.63■□□□□ 0.89
PTCH1-227ENST00000553256 MYL4P12829 197 aa20.63■□□□□ 0.89
PTCH1-227ENST00000553256 RPL13P26373 211 aaKnown RBP20.63■□□□□ 0.89
PTCH1-227ENST00000553256 PSMC2P35998 433 aaKnown RBP20.63■□□□□ 0.89
PTCH1-227ENST00000553256 MAGEA11P43364 429 aa20.63■□□□□ 0.89
PTCH1-227ENST00000553256 GPC5P78333 572 aa20.63■□□□□ 0.89
PTCH1-227ENST00000553256 MORC3Q14149 939 aa20.63■□□□□ 0.89
PTCH1-227ENST00000553256 TEAD2Q15562 447 aa20.63■□□□□ 0.89
PTCH1-227ENST00000553256 MGAT5BQ3V5L5 792 aa20.63■□□□□ 0.89
PTCH1-227ENST00000553256 FAM186BQ8IYM0 893 aa20.63■□□□□ 0.89
PTCH1-227ENST00000553256 ELSPBP1Q96BH3 223 aa20.63■□□□□ 0.89
PTCH1-227ENST00000553256 RSPRY1Q96DX4 576 aa20.63■□□□□ 0.89
PTCH1-227ENST00000553256 EEF2KMTQ96G04 330 aa20.63■□□□□ 0.89
PTCH1-227ENST00000553256 SEPT5Q99719 369 aaPredicted RBP20.63■□□□□ 0.89
PTCH1-227ENST00000553256 SYT15Q9BQS2 421 aa20.63■□□□□ 0.89
PTCH1-227ENST00000553256 PI4K2AQ9BTU6 479 aa20.63■□□□□ 0.89
PTCH1-227ENST00000553256 SMYD3Q9H7B4 428 aa20.63■□□□□ 0.89
PTCH1-227ENST00000553256 TMEM30AQ9NV96 361 aa20.63■□□□□ 0.89
PTCH1-227ENST00000553256 A0A1W2PRU2 124 aa20.62■□□□□ 0.89
PTCH1-227ENST00000553256 NOL4O94818 638 aa20.62■□□□□ 0.89
PTCH1-227ENST00000553256 F11P03951 625 aa20.62■□□□□ 0.89
PTCH1-227ENST00000553256 WEE1P30291 646 aa20.62■□□□□ 0.89
PTCH1-227ENST00000553256 PSMC1P62191 440 aaKnown RBP20.62■□□□□ 0.89
PTCH1-227ENST00000553256 UBE2HP62256 183 aa20.62■□□□□ 0.89
PTCH1-227ENST00000553256 TRPC3Q13507 836 aa20.62■□□□□ 0.89
PTCH1-227ENST00000553256 STXBP5Q5T5C0 1151 aa20.62■□□□□ 0.89
PTCH1-227ENST00000553256 FOXR2Q6PJQ5 311 aa20.62■□□□□ 0.89
PTCH1-227ENST00000553256 MYCBPAPQ8TBZ2 947 aa20.62■□□□□ 0.89
PTCH1-227ENST00000553256 GPR152Q8TDT2 470 aa20.62■□□□□ 0.89
PTCH1-227ENST00000553256 MYRFLQ96LU7 910 aa20.62■□□□□ 0.89
PTCH1-227ENST00000553256 KXD1Q9BQD3 176 aa20.62■□□□□ 0.89
PTCH1-227ENST00000553256 DPEP3Q9H4B8 488 aa20.62■□□□□ 0.89
PTCH1-227ENST00000553256 APOBEC3GQ9HC16 384 aaKnown RBP20.62■□□□□ 0.89
PTCH1-227ENST00000553256 PTPRDP23468 1912 aa20.62■□□□□ 0.89
PTCH1-227ENST00000553256 CACNA1HO95180 2353 aa20.61■□□□□ 0.89
PTCH1-227ENST00000553256 TRIM49BA6NDI0 452 aa20.61■□□□□ 0.89
PTCH1-227ENST00000553256 KINO60870 393 aaKnown RBP20.61■□□□□ 0.89
PTCH1-227ENST00000553256 TADA3O75528 432 aa20.61■□□□□ 0.89
PTCH1-227ENST00000553256 GNL1P36915 607 aaPredicted RBP20.61■□□□□ 0.89
PTCH1-227ENST00000553256 ASPAP45381 313 aa20.61■□□□□ 0.89
PTCH1-227ENST00000553256 CDH8P55286 799 aa20.61■□□□□ 0.89
PTCH1-227ENST00000553256 BIRC3Q13489 604 aa20.61■□□□□ 0.89
PTCH1-227ENST00000553256 ZNF699Q32M78 642 aa20.61■□□□□ 0.89
PTCH1-227ENST00000553256 SDHAF4Q5VUM1 108 aa20.61■□□□□ 0.89
PTCH1-227ENST00000553256 ITIH5Q86UX2 942 aa20.61■□□□□ 0.89
PTCH1-227ENST00000553256 TAS1R2Q8TE23 839 aa20.61■□□□□ 0.89
PTCH1-227ENST00000553256 GIPC2Q8TF65 315 aa20.61■□□□□ 0.89
PTCH1-227ENST00000553256 TAF4BQ92750 862 aa20.61■□□□□ 0.89
PTCH1-227ENST00000553256 SMARCD2Q92925 531 aa20.61■□□□□ 0.89
PTCH1-227ENST00000553256 MYLPFQ96A32 169 aa20.61■□□□□ 0.89
PTCH1-227ENST00000553256 PCED1BQ96HM7 432 aa20.61■□□□□ 0.89
PTCH1-227ENST00000553256 LRRC3BQ96PB8 259 aa20.61■□□□□ 0.89
PTCH1-227ENST00000553256 MMS19Q96T76 1030 aa20.61■□□□□ 0.89
PTCH1-227ENST00000553256 DUSP9Q99956 384 aaKnown RBP20.61■□□□□ 0.89
PTCH1-227ENST00000553256 GTPBP4Q9BZE4 634 aaKnown RBP20.61■□□□□ 0.89
PTCH1-227ENST00000553256 HLA-DRAP01903 254 aa20.6■□□□□ 0.89
PTCH1-227ENST00000553256 CFHP08603 1231 aa20.6■□□□□ 0.89
PTCH1-227ENST00000553256 PDGFRBP09619 1106 aa20.6■□□□□ 0.89
PTCH1-227ENST00000553256 CCNE1P24864 410 aa20.6■□□□□ 0.89
PTCH1-227ENST00000553256 AVPR2P30518 371 aa20.6■□□□□ 0.89
PTCH1-227ENST00000553256 GTF2H1P32780 548 aa20.6■□□□□ 0.89
PTCH1-227ENST00000553256 GCLMP48507 274 aa20.6■□□□□ 0.89
PTCH1-227ENST00000553256 LRRC63Q05C16 580 aa20.6■□□□□ 0.89
PTCH1-227ENST00000553256 DDR2Q16832 855 aa20.6■□□□□ 0.89
PTCH1-227ENST00000553256 SGSM1Q2NKQ1 1148 aa20.6■□□□□ 0.89
PTCH1-227ENST00000553256 SPOPLQ6IQ16 392 aa20.6■□□□□ 0.89
PTCH1-227ENST00000553256 TTI2Q6NXR4 508 aa20.6■□□□□ 0.89
PTCH1-227ENST00000553256 PAQR9Q6ZVX9 377 aa20.6■□□□□ 0.89
PTCH1-227ENST00000553256 TMEM105Q8N8V8 129 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms