RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	PRPF4B	Q13523	1007 aa	Known RBP	7.29	□□□□□ -1.24
CNOT2-238	ENST00000552422	GIT2	Q14161	759 aa		7.29	□□□□□ -1.24
CNOT2-238	ENST00000552422	CLLU1OS	Q5K130	101 aa		7.29	□□□□□ -1.24
CNOT2-238	ENST00000552422	UBXN11	Q5T124	520 aa		7.29	□□□□□ -1.24
CNOT2-238	ENST00000552422	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	7.29	□□□□□ -1.24
CNOT2-238	ENST00000552422	CMTR2	Q8IYT2	770 aa	Known RBP	7.29	□□□□□ -1.24
CNOT2-238	ENST00000552422	IQUB	Q8NA54	791 aa		7.29	□□□□□ -1.24
CNOT2-238	ENST00000552422	TMEM161B	Q8NDZ6	487 aa		7.29	□□□□□ -1.24
CNOT2-238	ENST00000552422	GAL3ST3	Q96A11	431 aa		7.29	□□□□□ -1.24
CNOT2-238	ENST00000552422	DNAJC19	Q96DA6	116 aa		7.29	□□□□□ -1.24
CNOT2-238	ENST00000552422	CPB2	Q96IY4	423 aa		7.29	□□□□□ -1.24
CNOT2-238	ENST00000552422	HRASLS5	Q96KN8	279 aa		7.29	□□□□□ -1.24
CNOT2-238	ENST00000552422	GUCD1	Q96NT3	240 aa		7.29	□□□□□ -1.24
CNOT2-238	ENST00000552422	TGS1	Q96RS0	853 aa	Known RBP	7.29	□□□□□ -1.24
CNOT2-238	ENST00000552422	PYM1	Q9BRP8	204 aa	Known RBP	7.29	□□□□□ -1.24
CNOT2-238	ENST00000552422	PANK2	Q9BZ23	570 aa		7.29	□□□□□ -1.24
CNOT2-238	ENST00000552422	TNMD	Q9H2S6	317 aa		7.29	□□□□□ -1.24
CNOT2-238	ENST00000552422	MAGEF1	Q9HAY2	307 aa		7.29	□□□□□ -1.24
CNOT2-238	ENST00000552422	PARVG	Q9HBI0	331 aa		7.29	□□□□□ -1.24
CNOT2-238	ENST00000552422	KMT5A	Q9NQR1	393 aa		7.29	□□□□□ -1.24
CNOT2-238	ENST00000552422	KBTBD4	Q9NVX7	518 aa		7.29	□□□□□ -1.24
CNOT2-238	ENST00000552422	MTMR10	Q9NXD2	777 aa		7.29	□□□□□ -1.24
CNOT2-238	ENST00000552422	LARS	Q9P2J5	1176 aa	Known RBP	7.29	□□□□□ -1.24
CNOT2-238	ENST00000552422	KCNG1	Q9UIX4	513 aa		7.29	□□□□□ -1.24
CNOT2-238	ENST00000552422	KCNH3	Q9ULD8	1083 aa		7.29	□□□□□ -1.24
CNOT2-238	ENST00000552422	PCDHB2	Q9Y5E7	798 aa		7.29	□□□□□ -1.24
CNOT2-238	ENST00000552422	ZMYM2	Q9UBW7	1377 aa		7.29	□□□□□ -1.24
CNOT2-238	ENST00000552422		A0A1W2PQ27	194 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422		A0A1W2PQ64	194 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422		A0A1W2PQD8	194 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	MEIS3P2	A8K0S8	358 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422		H0YCG3	227 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422		K7ERI5	159 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	SLC16A4	O15374	487 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	POLR2D	O15514	142 aa	Known RBP	7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	CD8B	P10966	210 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	FGFR1	P11362	822 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	PFKFB1	P16118	471 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	IBSP	P21815	317 aa	Predicted RBP	7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	NCKAP1L	P55160	1127 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	ERVK-21	P61565	698 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	BTG3	Q14201	252 aa	Predicted RBP	7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	WIPI1	Q5MNZ9	446 aa	Predicted RBP	7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	CNNM4	Q6P4Q7	775 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	SLC27A1	Q6PCB7	646 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	AGMO	Q6ZNB7	445 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	ARMCX6	Q7L4S7	300 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	HAUS6	Q7Z4H7	955 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	MRPL10	Q7Z7H8	261 aa	Known RBP	7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	WFDC3	Q8IUB2	231 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	LRRC43	Q8N309	656 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	FIBCD1	Q8N539	461 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	RNF169	Q8NCN4	708 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	RSPH1	Q8WYR4	309 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	DHX58	Q96C10	678 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	HEXIM2	Q96MH2	286 aa	Known RBP	7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	FAM161B	Q96MY7	647 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	SAMD11	Q96NU1	681 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	CASD1	Q96PB1	797 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	FIZ1	Q96SL8	496 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	EIF2A	Q9BY44	585 aa	Known RBP	7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	TRIM9	Q9C026	710 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	TMEM117	Q9H0C3	514 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	NXF3	Q9H4D5	531 aa	Known RBP	7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	PDZD7	Q9H5P4	517 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	OLFML3	Q9NRN5	406 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	SEL1L	Q9UBV2	794 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	PLAGL2	Q9UPG8	496 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	HPSE	Q9Y251	543 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	IPP	Q9Y573	584 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	MRPL42	Q9Y6G3	142 aa	Known RBP	7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	TSC2	P49815	1807 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	TRIO	O75962	3097 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	PLXNA3	P51805	1871 aa		7.28	□□□□□ -1.24
CNOT2-238	ENST00000552422	CUL9	Q8IWT3	2517 aa		7.27	□□□□□ -1.25
CNOT2-238	ENST00000552422		A0A1B0GVL5	298 aa		7.27	□□□□□ -1.25
CNOT2-238	ENST00000552422	EPOP	A6NHQ4	379 aa		7.27	□□□□□ -1.25
CNOT2-238	ENST00000552422	TBKBP1	A7MCY6	615 aa		7.27	□□□□□ -1.25
CNOT2-238	ENST00000552422	C5orf67	F2Z3F1	127 aa		7.27	□□□□□ -1.25
CNOT2-238	ENST00000552422		K7ENM7	598 aa		7.27	□□□□□ -1.25
CNOT2-238	ENST00000552422	ABLIM1	O14639	778 aa		7.27	□□□□□ -1.25
CNOT2-238	ENST00000552422	N4BP3	O15049	544 aa		7.27	□□□□□ -1.25
CNOT2-238	ENST00000552422	INPPL1	O15357	1258 aa		7.27	□□□□□ -1.25
CNOT2-238	ENST00000552422	LRIG2	O94898	1065 aa		7.27	□□□□□ -1.25
CNOT2-238	ENST00000552422	GAP43	P17677	238 aa		7.27	□□□□□ -1.25
CNOT2-238	ENST00000552422	ABCD1	P33897	745 aa		7.27	□□□□□ -1.25
CNOT2-238	ENST00000552422	CD96	P40200	585 aa		7.27	□□□□□ -1.25
CNOT2-238	ENST00000552422	NDUFA8	P51970	172 aa		7.27	□□□□□ -1.25
CNOT2-238	ENST00000552422	ETF1	P62495	437 aa	Known RBP	7.27	□□□□□ -1.25
CNOT2-238	ENST00000552422	GTF2B	Q00403	316 aa		7.27	□□□□□ -1.25
CNOT2-238	ENST00000552422	AMPD3	Q01432	767 aa		7.27	□□□□□ -1.25
CNOT2-238	ENST00000552422	STRN3	Q13033	797 aa		7.27	□□□□□ -1.25
CNOT2-238	ENST00000552422	PSMD2	Q13200	908 aa		7.27	□□□□□ -1.25
CNOT2-238	ENST00000552422	DCAF4L1	Q3SXM0	396 aa		7.27	□□□□□ -1.25
CNOT2-238	ENST00000552422	PAN2	Q504Q3	1202 aa	Known RBP	7.27	□□□□□ -1.25
CNOT2-238	ENST00000552422	EPC2	Q52LR7	807 aa		7.27	□□□□□ -1.25
CNOT2-238	ENST00000552422	NT5DC1	Q5TFE4	455 aa		7.27	□□□□□ -1.25
CNOT2-238	ENST00000552422	ATF7IP2	Q5U623	682 aa		7.27	□□□□□ -1.25
CNOT2-238	ENST00000552422	GLB1L	Q6UWU2	654 aa		7.27	□□□□□ -1.25
CNOT2-238	ENST00000552422	CDR2L	Q86X02	465 aa	Predicted RBP	7.27	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms