RNA–Protein interactions for RNA: ENST00000552282.1

CALCOCO1-220, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-220ENST00000552282 NOL4O94818 638 aa17.35■□□□□ 0.37
CALCOCO1-220ENST00000552282 TXLNAP40222 546 aa17.35■□□□□ 0.37
CALCOCO1-220ENST00000552282 TSPY1Q01534 308 aa17.35■□□□□ 0.37
CALCOCO1-220ENST00000552282 KCNA1Q09470 495 aa17.35■□□□□ 0.37
CALCOCO1-220ENST00000552282 TMEM196Q5HYL7 178 aa17.35■□□□□ 0.37
CALCOCO1-220ENST00000552282 CCDC73Q6ZRK6 1079 aa17.35■□□□□ 0.37
CALCOCO1-220ENST00000552282 SV2BQ7L1I2 683 aa17.35■□□□□ 0.37
CALCOCO1-220ENST00000552282 DYMQ7RTS9 669 aa17.35■□□□□ 0.37
CALCOCO1-220ENST00000552282 PDCL2Q8N4E4 241 aa17.35■□□□□ 0.37
CALCOCO1-220ENST00000552282 FUBP3Q96I24 572 aaKnown RBP eCLIP17.35■□□□□ 0.37
CALCOCO1-220ENST00000552282 ZFYVE19Q96K21 471 aa17.35■□□□□ 0.37
CALCOCO1-220ENST00000552282 CEP295NLQ96MC4 621 aa17.35■□□□□ 0.37
CALCOCO1-220ENST00000552282 HPS4Q9NQG7 708 aa17.35■□□□□ 0.37
CALCOCO1-220ENST00000552282 TMLHEQ9NVH6 421 aa17.35■□□□□ 0.37
CALCOCO1-220ENST00000552282 ABI2Q9NYB9 513 aaPredicted RBP17.35■□□□□ 0.37
CALCOCO1-220ENST00000552282 UXTQ9UBK9 157 aaPredicted RBP17.35■□□□□ 0.37
CALCOCO1-220ENST00000552282 CDV3Q9UKY7 258 aaKnown RBP17.35■□□□□ 0.37
CALCOCO1-220ENST00000552282 L1RE1Q9UN81 338 aa17.35■□□□□ 0.37
CALCOCO1-220ENST00000552282 PCDHB13Q9Y5F0 798 aa17.35■□□□□ 0.37
CALCOCO1-220ENST00000552282 PTPRDP23468 1912 aa17.35■□□□□ 0.37
CALCOCO1-220ENST00000552282 ANAPC1Q9H1A4 1944 aa17.35■□□□□ 0.37
CALCOCO1-220ENST00000552282 ZNF638Q14966 1978 aaKnown RBP17.35■□□□□ 0.37
CALCOCO1-220ENST00000552282 CHURC1-FNTBB4DL54 471 aa17.34■□□□□ 0.37
CALCOCO1-220ENST00000552282 HRO43593 1189 aa17.34■□□□□ 0.37
CALCOCO1-220ENST00000552282 TADA3O75528 432 aa17.34■□□□□ 0.37
CALCOCO1-220ENST00000552282 TCF3P15923 654 aa17.34■□□□□ 0.37
CALCOCO1-220ENST00000552282 HELZP42694 1942 aaKnown RBP17.34■□□□□ 0.37
CALCOCO1-220ENST00000552282 CASP5P51878 434 aa17.34■□□□□ 0.37
CALCOCO1-220ENST00000552282 TNK2Q07912 1038 aa17.34■□□□□ 0.37
CALCOCO1-220ENST00000552282 CSRP2Q16527 193 aa17.34■□□□□ 0.37
CALCOCO1-220ENST00000552282 INTS6LQ5JSJ4 861 aaKnown RBP17.34■□□□□ 0.37
CALCOCO1-220ENST00000552282 RRAGBQ5VZM2 374 aa17.34■□□□□ 0.37
CALCOCO1-220ENST00000552282 DPH6Q7L8W6 267 aa17.34■□□□□ 0.37
CALCOCO1-220ENST00000552282 MON1AQ86VX9 555 aa17.34■□□□□ 0.37
CALCOCO1-220ENST00000552282 TOP6BLQ8N6T0 577 aa17.34■□□□□ 0.37
CALCOCO1-220ENST00000552282 FAM200AQ8TCP9 573 aa17.34■□□□□ 0.37
CALCOCO1-220ENST00000552282 NETO1Q8TDF5 533 aa17.34■□□□□ 0.37
CALCOCO1-220ENST00000552282 CACTINQ8WUQ7 758 aaKnown RBP17.34■□□□□ 0.37
CALCOCO1-220ENST00000552282 USP13Q92995 863 aaPredicted RBP17.34■□□□□ 0.37
CALCOCO1-220ENST00000552282 INTS4Q96HW7 963 aaKnown RBP17.34■□□□□ 0.37
CALCOCO1-220ENST00000552282 FAM213AQ9BRX8 229 aa17.34■□□□□ 0.37
CALCOCO1-220ENST00000552282 TMEM206Q9H813 350 aa17.34■□□□□ 0.37
CALCOCO1-220ENST00000552282 TDP1Q9NUW8 608 aa17.34■□□□□ 0.37
CALCOCO1-220ENST00000552282 RBAKQ9NYW8 714 aaPredicted RBP17.34■□□□□ 0.37
CALCOCO1-220ENST00000552282 VPS37CA5D8V6 355 aaPredicted RBP17.33■□□□□ 0.36
CALCOCO1-220ENST00000552282 EXTL3O43909 919 aa17.33■□□□□ 0.36
CALCOCO1-220ENST00000552282 AKAP3O75969 853 aa17.33■□□□□ 0.36
CALCOCO1-220ENST00000552282 ITGB3P05106 788 aa17.33■□□□□ 0.36
CALCOCO1-220ENST00000552282 POLR2BP30876 1174 aaKnown RBP17.33■□□□□ 0.36
CALCOCO1-220ENST00000552282 AVPR1AP37288 418 aa17.33■□□□□ 0.36
CALCOCO1-220ENST00000552282 FNTBP49356 437 aa17.33■□□□□ 0.36
CALCOCO1-220ENST00000552282 RPL10AP62906 217 aaKnown RBP17.33■□□□□ 0.36
CALCOCO1-220ENST00000552282 DMWDQ09019 674 aa17.33■□□□□ 0.36
CALCOCO1-220ENST00000552282 USP4Q13107 963 aa17.33■□□□□ 0.36
CALCOCO1-220ENST00000552282 RUNX3Q13761 415 aa17.33■□□□□ 0.36
CALCOCO1-220ENST00000552282 SIM2Q14190 667 aaPredicted RBP17.33■□□□□ 0.36
CALCOCO1-220ENST00000552282 PON2Q15165 354 aa17.33■□□□□ 0.36
CALCOCO1-220ENST00000552282 LOXL4Q96JB6 756 aa17.33■□□□□ 0.36
CALCOCO1-220ENST00000552282 C2orf42Q9NWW7 574 aa17.33■□□□□ 0.36
CALCOCO1-220ENST00000552282 SIX4Q9UIU6 781 aa17.33■□□□□ 0.36
CALCOCO1-220ENST00000552282 USP18Q9UMW8 372 aa17.33■□□□□ 0.36
CALCOCO1-220ENST00000552282 EML5Q05BV3 1969 aa17.32■□□□□ 0.36
CALCOCO1-220ENST00000552282 SLC30A4O14863 429 aa17.32■□□□□ 0.36
CALCOCO1-220ENST00000552282 HUS1O60921 280 aa17.32■□□□□ 0.36
CALCOCO1-220ENST00000552282 GCNT3O95395 438 aa17.32■□□□□ 0.36
CALCOCO1-220ENST00000552282 PFKLP17858 780 aa17.32■□□□□ 0.36
CALCOCO1-220ENST00000552282 SYT1P21579 422 aa17.32■□□□□ 0.36
CALCOCO1-220ENST00000552282 MAGEA11P43364 429 aa17.32■□□□□ 0.36
CALCOCO1-220ENST00000552282 LHX1P48742 406 aa17.32■□□□□ 0.36
CALCOCO1-220ENST00000552282 MYL7Q01449 175 aa17.32■□□□□ 0.36
CALCOCO1-220ENST00000552282 SLC39A14Q15043 492 aa17.32■□□□□ 0.36
CALCOCO1-220ENST00000552282 PDGFRLQ15198 375 aa17.32■□□□□ 0.36
CALCOCO1-220ENST00000552282 TAF12Q16514 161 aa17.32■□□□□ 0.36
CALCOCO1-220ENST00000552282 CNNM4Q6P4Q7 775 aa17.32■□□□□ 0.36
CALCOCO1-220ENST00000552282 KIAA1958Q8N8K9 716 aa17.32■□□□□ 0.36
CALCOCO1-220ENST00000552282 RIN3Q8TB24 985 aa17.32■□□□□ 0.36
CALCOCO1-220ENST00000552282 GIPC2Q8TF65 315 aa17.32■□□□□ 0.36
CALCOCO1-220ENST00000552282 MRPS31Q92665 395 aaKnown RBP17.32■□□□□ 0.36
CALCOCO1-220ENST00000552282 GKN1Q9NS71 199 aa17.32■□□□□ 0.36
CALCOCO1-220ENST00000552282 SEMA4GQ9NTN9 838 aa17.32■□□□□ 0.36
CALCOCO1-220ENST00000552282 AGAP1Q9UPQ3 857 aa17.32■□□□□ 0.36
CALCOCO1-220ENST00000552282 CCL26Q9Y258 94 aa17.32■□□□□ 0.36
CALCOCO1-220ENST00000552282 LAMA1P25391 3075 aa17.32■□□□□ 0.36
CALCOCO1-220ENST00000552282 RALGAPA1Q6GYQ0 2036 aa17.31■□□□□ 0.36
CALCOCO1-220ENST00000552282 MYO16Q9Y6X6 1858 aa17.31■□□□□ 0.36
CALCOCO1-220ENST00000552282 A0A087X0B3 334 aa17.31■□□□□ 0.36
CALCOCO1-220ENST00000552282 PCSK1P29120 753 aa17.31■□□□□ 0.36
CALCOCO1-220ENST00000552282 NASPP49321 788 aaPredicted RBP17.31■□□□□ 0.36
CALCOCO1-220ENST00000552282 TFAMQ00059 246 aaKnown RBP17.31■□□□□ 0.36
CALCOCO1-220ENST00000552282 AMPD2Q01433 879 aa17.31■□□□□ 0.36
CALCOCO1-220ENST00000552282 FAM160A1Q05DH4 1040 aa17.31■□□□□ 0.36
CALCOCO1-220ENST00000552282 SPEM2Q0P670 501 aa17.31■□□□□ 0.36
CALCOCO1-220ENST00000552282 BFSP1Q12934 665 aa17.31■□□□□ 0.36
CALCOCO1-220ENST00000552282 ZNF77Q15935 545 aa17.31■□□□□ 0.36
CALCOCO1-220ENST00000552282 FBXO43Q4G163 708 aa17.31■□□□□ 0.36
CALCOCO1-220ENST00000552282 FSTL4Q6MZW2 842 aa17.31■□□□□ 0.36
CALCOCO1-220ENST00000552282 FAM171BQ6P995 826 aa17.31■□□□□ 0.36
CALCOCO1-220ENST00000552282 PRR23CQ6ZRP0 262 aa17.31■□□□□ 0.36
CALCOCO1-220ENST00000552282 ZSWIM2Q8NEG5 633 aa17.31■□□□□ 0.36
CALCOCO1-220ENST00000552282 SAAL1Q96ER3 474 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms