RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 ASIC1P78348 528 aa16.66■□□□□ 0.26
BRF1-220ENST00000552127 AMPD3Q01432 767 aa16.66■□□□□ 0.26
BRF1-220ENST00000552127 C9orf57Q5W0N0 161 aa16.66■□□□□ 0.26
BRF1-220ENST00000552127 RESP18Q5W5W9 173 aa16.66■□□□□ 0.26
BRF1-220ENST00000552127 SYCP3Q8IZU3 236 aa16.66■□□□□ 0.26
BRF1-220ENST00000552127 ASB16Q96NS5 453 aa16.66■□□□□ 0.26
BRF1-220ENST00000552127 FAM13BQ9NYF5 915 aa16.66■□□□□ 0.26
BRF1-220ENST00000552127 EML5Q05BV3 1969 aa16.66■□□□□ 0.26
BRF1-220ENST00000552127 ARHGEF37A1IGU5 675 aa16.65■□□□□ 0.26
BRF1-220ENST00000552127 PRRG1O14668 218 aa16.65■□□□□ 0.26
BRF1-220ENST00000552127 POLR2DO15514 142 aaKnown RBP16.65■□□□□ 0.26
BRF1-220ENST00000552127 PRPF6O94906 941 aaKnown RBP16.65■□□□□ 0.26
BRF1-220ENST00000552127 IL18RAPO95256 599 aa16.65■□□□□ 0.26
BRF1-220ENST00000552127 CEACAM1P13688 526 aa16.65■□□□□ 0.26
BRF1-220ENST00000552127 ATF2P15336 505 aa16.65■□□□□ 0.26
BRF1-220ENST00000552127 PTPN2P17706 415 aa16.65■□□□□ 0.26
BRF1-220ENST00000552127 GARTP22102 1010 aa16.65■□□□□ 0.26
BRF1-220ENST00000552127 PAX3P23760 479 aa16.65■□□□□ 0.26
BRF1-220ENST00000552127 ELF1P32519 619 aa16.65■□□□□ 0.26
BRF1-220ENST00000552127 PXNP49023 591 aaPredicted RBP16.65■□□□□ 0.26
BRF1-220ENST00000552127 MLLT6P55198 1093 aaPredicted RBP16.65■□□□□ 0.26
BRF1-220ENST00000552127 YWHAHQ04917 246 aaPredicted RBP16.65■□□□□ 0.26
BRF1-220ENST00000552127 PRSS36Q5K4E3 855 aa16.65■□□□□ 0.26
BRF1-220ENST00000552127 DAB2IPQ5VWQ8 1189 aa16.65■□□□□ 0.26
BRF1-220ENST00000552127 TPGS2Q68CL5 300 aa16.65■□□□□ 0.26
BRF1-220ENST00000552127 KIAA1211LQ6NV74 962 aa16.65■□□□□ 0.26
BRF1-220ENST00000552127 CNNM4Q6P4Q7 775 aa16.65■□□□□ 0.26
BRF1-220ENST00000552127 DSTYKQ6XUX3 929 aa16.65■□□□□ 0.26
BRF1-220ENST00000552127 STXBP4Q6ZWJ1 553 aa16.65■□□□□ 0.26
BRF1-220ENST00000552127 EFCAB13Q8IY85 973 aa16.65■□□□□ 0.26
BRF1-220ENST00000552127 TCEAL8Q8IYN2 117 aa16.65■□□□□ 0.26
BRF1-220ENST00000552127 TCEAL4Q96EI5 215 aa16.65■□□□□ 0.26
BRF1-220ENST00000552127 SAAL1Q96ER3 474 aa16.65■□□□□ 0.26
BRF1-220ENST00000552127 FAM213AQ9BRX8 229 aa16.65■□□□□ 0.26
BRF1-220ENST00000552127 TMEM206Q9H813 350 aa16.65■□□□□ 0.26
BRF1-220ENST00000552127 ANO9A1A5B4 782 aa16.64■□□□□ 0.25
BRF1-220ENST00000552127 ARNTLO00327 626 aa16.64■□□□□ 0.25
BRF1-220ENST00000552127 PIRO00625 290 aa16.64■□□□□ 0.25
BRF1-220ENST00000552127 ZNF263O14978 683 aa16.64■□□□□ 0.25
BRF1-220ENST00000552127 OAZ2O95190 189 aa16.64■□□□□ 0.25
BRF1-220ENST00000552127 LRG1P02750 347 aa16.64■□□□□ 0.25
BRF1-220ENST00000552127 CCDC192P0DO97 292 aa16.64■□□□□ 0.25
BRF1-220ENST00000552127 ODC1P11926 461 aa16.64■□□□□ 0.25
BRF1-220ENST00000552127 CPB1P15086 417 aa16.64■□□□□ 0.25
BRF1-220ENST00000552127 TYMPP19971 482 aa16.64■□□□□ 0.25
BRF1-220ENST00000552127 LILRA4P59901 499 aa16.64■□□□□ 0.25
BRF1-220ENST00000552127 DGKKQ5KSL6 1271 aa16.64■□□□□ 0.25
BRF1-220ENST00000552127 USP37Q86T82 979 aa16.64■□□□□ 0.25
BRF1-220ENST00000552127 NT5DC4Q86YG4 428 aa16.64■□□□□ 0.25
BRF1-220ENST00000552127 BRSK2Q8IWQ3 736 aa16.64■□□□□ 0.25
BRF1-220ENST00000552127 GLIS3Q8NEA6 775 aa16.64■□□□□ 0.25
BRF1-220ENST00000552127 ZSWIM2Q8NEG5 633 aa16.64■□□□□ 0.25
BRF1-220ENST00000552127 HPS3Q969F9 1004 aa16.64■□□□□ 0.25
BRF1-220ENST00000552127 ZSWIM3Q96MP5 696 aa16.64■□□□□ 0.25
BRF1-220ENST00000552127 C7orf25Q9BPX7 421 aa16.64■□□□□ 0.25
BRF1-220ENST00000552127 OXCT2Q9BYC2 517 aaPredicted RBP16.64■□□□□ 0.25
BRF1-220ENST00000552127 CYP4F11Q9HBI6 524 aa16.64■□□□□ 0.25
BRF1-220ENST00000552127 DPP3Q9NY33 737 aa16.64■□□□□ 0.25
BRF1-220ENST00000552127 RCOR1Q9UKL0 485 aa16.64■□□□□ 0.25
BRF1-220ENST00000552127 NEUROG3Q9Y4Z2 214 aa16.64■□□□□ 0.25
BRF1-220ENST00000552127 TIMM13Q9Y5L4 95 aaPredicted RBP16.64■□□□□ 0.25
BRF1-220ENST00000552127 INSL5Q9Y5Q6 135 aa16.64■□□□□ 0.25
BRF1-220ENST00000552127 SLC38A8A6NNN8 435 aa16.63■□□□□ 0.25
BRF1-220ENST00000552127 HYAL3O43820 417 aaPredicted RBP16.63■□□□□ 0.25
BRF1-220ENST00000552127 SEC24AO95486 1093 aa16.63■□□□□ 0.25
BRF1-220ENST00000552127 LDHAP00338 332 aaKnown RBP16.63■□□□□ 0.25
BRF1-220ENST00000552127 VIPR2P41587 438 aa16.63■□□□□ 0.25
BRF1-220ENST00000552127 SOX9P48436 509 aa16.63■□□□□ 0.25
BRF1-220ENST00000552127 OVOS1Q6IE37 1185 aa16.63■□□□□ 0.25
BRF1-220ENST00000552127 C1orf228Q6PIY5 440 aa16.63■□□□□ 0.25
BRF1-220ENST00000552127 C19orf48Q6RUI8 117 aa16.63■□□□□ 0.25
BRF1-220ENST00000552127 PDZD3Q86UT5 571 aa16.63■□□□□ 0.25
BRF1-220ENST00000552127 DEPDC1BQ8WUY9 529 aa16.63■□□□□ 0.25
BRF1-220ENST00000552127 SMARCD2Q92925 531 aa16.63■□□□□ 0.25
BRF1-220ENST00000552127 MSANTD3Q96H12 275 aa16.63■□□□□ 0.25
BRF1-220ENST00000552127 ZC3H10Q96K80 434 aaKnown RBP16.63■□□□□ 0.25
BRF1-220ENST00000552127 SENP8Q96LD8 212 aa16.63■□□□□ 0.25
BRF1-220ENST00000552127 CORO1BQ9BR76 489 aa16.63■□□□□ 0.25
BRF1-220ENST00000552127 PYM1Q9BRP8 204 aaKnown RBP16.63■□□□□ 0.25
BRF1-220ENST00000552127 CBWD1Q9BRT8 395 aa16.63■□□□□ 0.25
BRF1-220ENST00000552127 RBAKQ9NYW8 714 aaPredicted RBP16.63■□□□□ 0.25
BRF1-220ENST00000552127 AFF4Q9UHB7 1163 aaKnown RBP16.63■□□□□ 0.25
BRF1-220ENST00000552127 MAFFQ9ULX9 164 aa16.63■□□□□ 0.25
BRF1-220ENST00000552127 GPSM3Q9Y4H4 160 aa16.63■□□□□ 0.25
BRF1-220ENST00000552127 NCANO14594 1321 aa16.63■□□□□ 0.25
BRF1-220ENST00000552127 NUP210Q8TEM1 1887 aaPredicted RBP16.63■□□□□ 0.25
BRF1-220ENST00000552127 DENND4CQ5VZ89 1909 aa16.62■□□□□ 0.25
BRF1-220ENST00000552127 OR6C75A6NL08 312 aa16.62■□□□□ 0.25
BRF1-220ENST00000552127 EIF3DO15371 548 aaKnown RBP eCLIP16.62■□□□□ 0.25
BRF1-220ENST00000552127 EXTL3O43909 919 aa16.62■□□□□ 0.25
BRF1-220ENST00000552127 CSRP1P21291 193 aaKnown RBP16.62■□□□□ 0.25
BRF1-220ENST00000552127 CCR2P41597 374 aa16.62■□□□□ 0.25
BRF1-220ENST00000552127 TAF6P49848 677 aa16.62■□□□□ 0.25
BRF1-220ENST00000552127 WNT7BP56706 349 aa16.62■□□□□ 0.25
BRF1-220ENST00000552127 FAM26FQ5R3K3 315 aa16.62■□□□□ 0.25
BRF1-220ENST00000552127 ARMCX5Q6P1M9 558 aa16.62■□□□□ 0.25
BRF1-220ENST00000552127 TXNDC11Q6PKC3 985 aa16.62■□□□□ 0.25
BRF1-220ENST00000552127 RNF19BQ6ZMZ0 732 aa16.62■□□□□ 0.25
BRF1-220ENST00000552127 UNC13DQ70J99 1090 aa16.62■□□□□ 0.25
BRF1-220ENST00000552127 EPM2AIP1Q7L775 607 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms