RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 GFPT1Q06210 699 aaPredicted RBP16.56■□□□□ 0.24
CACNB3-220ENST00000551716 MCL1Q07820 350 aa16.56■□□□□ 0.24
CACNB3-220ENST00000551716 MTF1Q14872 753 aa16.56■□□□□ 0.24
CACNB3-220ENST00000551716 RABEPKQ7Z6M1 372 aa16.56■□□□□ 0.24
CACNB3-220ENST00000551716 RAB44Q7Z6P3 723 aaPredicted RBP16.56■□□□□ 0.24
CACNB3-220ENST00000551716 TMEM150AQ86TG1 271 aa16.56■□□□□ 0.24
CACNB3-220ENST00000551716 ABCA7Q8IZY2 2146 aa16.56■□□□□ 0.24
CACNB3-220ENST00000551716 OLIG1Q8TAK6 271 aa16.56■□□□□ 0.24
CACNB3-220ENST00000551716 GIPC2Q8TF65 315 aa16.56■□□□□ 0.24
CACNB3-220ENST00000551716 EZH1Q92800 747 aaPredicted RBP16.56■□□□□ 0.24
CACNB3-220ENST00000551716 ZBTB45Q96K62 511 aaPredicted RBP16.56■□□□□ 0.24
CACNB3-220ENST00000551716 SLC6A14Q9UN76 642 aa16.56■□□□□ 0.24
CACNB3-220ENST00000551716 KIAA1024Q9UPX6 916 aa16.56■□□□□ 0.24
CACNB3-220ENST00000551716 DNM3Q9UQ16 869 aa16.56■□□□□ 0.24
CACNB3-220ENST00000551716 ASCC3Q8N3C0 2202 aaKnown RBP16.55■□□□□ 0.24
CACNB3-220ENST00000551716 WNT7AO00755 349 aa16.55■□□□□ 0.24
CACNB3-220ENST00000551716 OPHN1O60890 802 aa16.55■□□□□ 0.24
CACNB3-220ENST00000551716 CYP11A1P05108 521 aa16.55■□□□□ 0.24
CACNB3-220ENST00000551716 OR52Z1P0C646 297 aa16.55■□□□□ 0.24
CACNB3-220ENST00000551716 CXCL8P10145 99 aa16.55■□□□□ 0.24
CACNB3-220ENST00000551716 HAPLN1P10915 354 aaPredicted RBP16.55■□□□□ 0.24
CACNB3-220ENST00000551716 MATR3P43243 847 aaKnown RBP eCLIP16.55■□□□□ 0.24
CACNB3-220ENST00000551716 MRPS21P82921 87 aaKnown RBP16.55■□□□□ 0.24
CACNB3-220ENST00000551716 FAM160A1Q05DH4 1040 aa16.55■□□□□ 0.24
CACNB3-220ENST00000551716 SCAPQ12770 1279 aa16.55■□□□□ 0.24
CACNB3-220ENST00000551716 CRY1Q16526 586 aa16.55■□□□□ 0.24
CACNB3-220ENST00000551716 COL28A1Q2UY09 1125 aa16.55■□□□□ 0.24
CACNB3-220ENST00000551716 HSF5Q4G112 596 aaPredicted RBP16.55■□□□□ 0.24
CACNB3-220ENST00000551716 SEZ6Q53EL9 994 aa16.55■□□□□ 0.24
CACNB3-220ENST00000551716 TXNDC8Q6A555 127 aa16.55■□□□□ 0.24
CACNB3-220ENST00000551716 WHAMMQ8TF30 809 aa16.55■□□□□ 0.24
CACNB3-220ENST00000551716 SPIRE2Q8WWL2 714 aa16.55■□□□□ 0.24
CACNB3-220ENST00000551716 TIPINQ9BVW5 301 aa16.55■□□□□ 0.24
CACNB3-220ENST00000551716 CCDC86Q9H6F5 360 aaKnown RBP16.55■□□□□ 0.24
CACNB3-220ENST00000551716 UXTQ9UBK9 157 aaPredicted RBP16.55■□□□□ 0.24
CACNB3-220ENST00000551716 MMP17Q9ULZ9 603 aa16.55■□□□□ 0.24
CACNB3-220ENST00000551716 EML5Q05BV3 1969 aa16.55■□□□□ 0.24
CACNB3-220ENST00000551716 CACNA1EQ15878 2313 aa16.54■□□□□ 0.24
CACNB3-220ENST00000551716 ATG2BQ96BY7 2078 aa16.54■□□□□ 0.24
CACNB3-220ENST00000551716 SLC16A4O15374 487 aa16.54■□□□□ 0.24
CACNB3-220ENST00000551716 HIP1RO75146 1068 aa16.54■□□□□ 0.24
CACNB3-220ENST00000551716 USP17L7P0C7H9 530 aa16.54■□□□□ 0.24
CACNB3-220ENST00000551716 CSH1P0DML2 217 aa16.54■□□□□ 0.24
CACNB3-220ENST00000551716 CSH2P0DML3 217 aa16.54■□□□□ 0.24
CACNB3-220ENST00000551716 HMGA1P17096 107 aaKnown RBP16.54■□□□□ 0.24
CACNB3-220ENST00000551716 P2RY2P41231 377 aa16.54■□□□□ 0.24
CACNB3-220ENST00000551716 SPAG1Q07617 926 aa16.54■□□□□ 0.24
CACNB3-220ENST00000551716 DUOXA1Q1HG43 343 aa16.54■□□□□ 0.24
CACNB3-220ENST00000551716 C2orf27AQ580R0 203 aa16.54■□□□□ 0.24
CACNB3-220ENST00000551716 LYSMD4Q5XG99 296 aa16.54■□□□□ 0.24
CACNB3-220ENST00000551716 CD302Q8IX05 232 aa16.54■□□□□ 0.24
CACNB3-220ENST00000551716 DCP1BQ8IZD4 617 aaKnown RBP16.54■□□□□ 0.24
CACNB3-220ENST00000551716 DAW1Q8N136 415 aa16.54■□□□□ 0.24
CACNB3-220ENST00000551716 MDGA1Q8NFP4 955 aa16.54■□□□□ 0.24
CACNB3-220ENST00000551716 OR10T2Q8NGX3 314 aa16.54■□□□□ 0.24
CACNB3-220ENST00000551716 TMEM206Q9H813 350 aa16.54■□□□□ 0.24
CACNB3-220ENST00000551716 PILRBQ9UKJ0 227 aa16.54■□□□□ 0.24
CACNB3-220ENST00000551716 NUP205Q92621 2012 aa16.53■□□□□ 0.24
CACNB3-220ENST00000551716 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.53■□□□□ 0.24
CACNB3-220ENST00000551716 CTDNEP1O95476 244 aa16.53■□□□□ 0.24
CACNB3-220ENST00000551716 CFIP05156 583 aa16.53■□□□□ 0.24
CACNB3-220ENST00000551716 SERPINF2P08697 491 aa16.53■□□□□ 0.24
CACNB3-220ENST00000551716 FDPSP14324 419 aaKnown RBP16.53■□□□□ 0.24
CACNB3-220ENST00000551716 NMT1P30419 496 aaKnown RBP16.53■□□□□ 0.24
CACNB3-220ENST00000551716 SLC14A1Q13336 389 aa16.53■□□□□ 0.24
CACNB3-220ENST00000551716 PDIA5Q14554 519 aa16.53■□□□□ 0.24
CACNB3-220ENST00000551716 SAFBQ15424 915 aaKnown RBP eCLIP16.53■□□□□ 0.24
CACNB3-220ENST00000551716 ECM1Q16610 540 aa16.53■□□□□ 0.24
CACNB3-220ENST00000551716 EML3Q32P44 896 aa16.53■□□□□ 0.24
CACNB3-220ENST00000551716 SPATA1Q5VX52 437 aa16.53■□□□□ 0.24
CACNB3-220ENST00000551716 PEAR1Q5VY43 1037 aaPredicted RBP16.53■□□□□ 0.24
CACNB3-220ENST00000551716 NAIF1Q69YI7 327 aaPredicted RBP16.53■□□□□ 0.24
CACNB3-220ENST00000551716 TTC30AQ86WT1 665 aa16.53■□□□□ 0.24
CACNB3-220ENST00000551716 TMEFF1Q8IYR6 380 aa16.53■□□□□ 0.24
CACNB3-220ENST00000551716 GLIS3Q8NEA6 775 aa16.53■□□□□ 0.24
CACNB3-220ENST00000551716 RAB34Q9BZG1 259 aa16.53■□□□□ 0.24
CACNB3-220ENST00000551716 POLMQ9NP87 494 aaPredicted RBP16.53■□□□□ 0.24
CACNB3-220ENST00000551716 TMEM74BQ9NUR3 256 aa16.53■□□□□ 0.24
CACNB3-220ENST00000551716 DDX19AQ9NUU7 478 aaKnown RBP16.53■□□□□ 0.24
CACNB3-220ENST00000551716 LRWD1Q9UFC0 647 aa16.53■□□□□ 0.24
CACNB3-220ENST00000551716 CIZ1Q9ULV3 898 aaPredicted RBP16.53■□□□□ 0.24
CACNB3-220ENST00000551716 PCDHB5Q9Y5E4 795 aa16.53■□□□□ 0.24
CACNB3-220ENST00000551716 IGSF10Q6WRI0 2623 aa16.53■□□□□ 0.24
CACNB3-220ENST00000551716 LAMA5O15230 3695 aa16.53■□□□□ 0.24
CACNB3-220ENST00000551716 TRAV19A0A0A6YYK7 116 aa16.52■□□□□ 0.24
CACNB3-220ENST00000551716 LACTBL1A8MY62 500 aa16.52■□□□□ 0.24
CACNB3-220ENST00000551716 H0YCG3 227 aa16.52■□□□□ 0.24
CACNB3-220ENST00000551716 K7EQS6 105 aa16.52■□□□□ 0.24
CACNB3-220ENST00000551716 NFATC1O95644 943 aa16.52■□□□□ 0.24
CACNB3-220ENST00000551716 ADRB2P07550 413 aa16.52■□□□□ 0.24
CACNB3-220ENST00000551716 PTGER3P43115 390 aa16.52■□□□□ 0.24
CACNB3-220ENST00000551716 FXR2P51116 673 aaKnown RBP eCLIP16.52■□□□□ 0.24
CACNB3-220ENST00000551716 ANKRD1Q15327 319 aa16.52■□□□□ 0.24
CACNB3-220ENST00000551716 ADAMTS14Q8WXS8 1223 aa16.52■□□□□ 0.24
CACNB3-220ENST00000551716 FNBP1Q96RU3 617 aa16.52■□□□□ 0.24
CACNB3-220ENST00000551716 GTPBP2Q9BX10 602 aaKnown RBP16.52■□□□□ 0.24
CACNB3-220ENST00000551716 RPF1Q9H9Y2 349 aaKnown RBP16.52■□□□□ 0.24
CACNB3-220ENST00000551716 SCUBE2Q9NQ36 999 aa16.52■□□□□ 0.24
CACNB3-220ENST00000551716 ABI2Q9NYB9 513 aaPredicted RBP16.52■□□□□ 0.24
CACNB3-220ENST00000551716 MBD1Q9UIS9 605 aaPredicted RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms