RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 MTF1Q14872 753 aa15.7■□□□□ 0.1
VPS29-209ENST00000551655 PDGFRLQ15198 375 aa15.7■□□□□ 0.1
VPS29-209ENST00000551655 CRY1Q16526 586 aa15.7■□□□□ 0.1
VPS29-209ENST00000551655 SLC10A6Q3KNW5 377 aa15.7■□□□□ 0.1
VPS29-209ENST00000551655 OVOS1Q6IE37 1185 aa15.7■□□□□ 0.1
VPS29-209ENST00000551655 DSTYKQ6XUX3 929 aa15.7■□□□□ 0.1
VPS29-209ENST00000551655 TAS1R3Q7RTX0 852 aa15.7■□□□□ 0.1
VPS29-209ENST00000551655 APBB1IPQ7Z5R6 666 aaPredicted RBP15.7■□□□□ 0.1
VPS29-209ENST00000551655 USP37Q86T82 979 aa15.7■□□□□ 0.1
VPS29-209ENST00000551655 SKAP1Q86WV1 359 aa15.7■□□□□ 0.1
VPS29-209ENST00000551655 NACC1Q96RE7 527 aa15.7■□□□□ 0.1
VPS29-209ENST00000551655 NAP1L4Q99733 375 aaKnown RBP15.7■□□□□ 0.1
VPS29-209ENST00000551655 MMP17Q9ULZ9 603 aa15.7■□□□□ 0.1
VPS29-209ENST00000551655 ARHGEF35A5YM69 484 aa15.69■□□□□ 0.1
VPS29-209ENST00000551655 CPLX1O14810 134 aa15.69■□□□□ 0.1
VPS29-209ENST00000551655 EVCP57679 992 aa15.69■□□□□ 0.1
VPS29-209ENST00000551655 NLRP12P59046 1061 aa15.69■□□□□ 0.1
VPS29-209ENST00000551655 GFPT1Q06210 699 aaPredicted RBP15.69■□□□□ 0.1
VPS29-209ENST00000551655 TOB2Q14106 344 aaPredicted RBP15.69■□□□□ 0.1
VPS29-209ENST00000551655 VEPH1Q14D04 833 aa15.69■□□□□ 0.1
VPS29-209ENST00000551655 PPP2R5AQ15172 486 aa15.69■□□□□ 0.1
VPS29-209ENST00000551655 SLC39A12Q504Y0 691 aa15.69■□□□□ 0.1
VPS29-209ENST00000551655 PEAR1Q5VY43 1037 aaPredicted RBP15.69■□□□□ 0.1
VPS29-209ENST00000551655 SLCO6A1Q86UG4 719 aa15.69■□□□□ 0.1
VPS29-209ENST00000551655 FBXL16Q8N461 479 aa15.69■□□□□ 0.1
VPS29-209ENST00000551655 SLC39A7Q92504 469 aa15.69■□□□□ 0.1
VPS29-209ENST00000551655 TCHPQ9BT92 498 aa15.69■□□□□ 0.1
VPS29-209ENST00000551655 CAPN10Q9HC96 672 aa15.69■□□□□ 0.1
VPS29-209ENST00000551655 DUS2Q9NX74 493 aaKnown RBP15.69■□□□□ 0.1
VPS29-209ENST00000551655 HECTD1Q9ULT8 2610 aa15.69■□□□□ 0.1
VPS29-209ENST00000551655 F11P03951 625 aa15.68■□□□□ 0.1
VPS29-209ENST00000551655 MCF2P10911 925 aa15.68■□□□□ 0.1
VPS29-209ENST00000551655 OPRD1P41143 372 aa15.68■□□□□ 0.1
VPS29-209ENST00000551655 AARSP49588 968 aaKnown RBP eCLIP15.68■□□□□ 0.1
VPS29-209ENST00000551655 GPR15P49685 360 aa15.68■□□□□ 0.1
VPS29-209ENST00000551655 CYP4F3Q08477 520 aa15.68■□□□□ 0.1
VPS29-209ENST00000551655 MESP2Q0VG99 397 aa15.68■□□□□ 0.1
VPS29-209ENST00000551655 MYBPC2Q14324 1141 aa15.68■□□□□ 0.1
VPS29-209ENST00000551655 TAF12Q16514 161 aa15.68■□□□□ 0.1
VPS29-209ENST00000551655 DUOXA1Q1HG43 343 aa15.68■□□□□ 0.1
VPS29-209ENST00000551655 EML3Q32P44 896 aa15.68■□□□□ 0.1
VPS29-209ENST00000551655 MAP7D1Q3KQU3 841 aa15.68■□□□□ 0.1
VPS29-209ENST00000551655 ALLCQ8N6M5 410 aa15.68■□□□□ 0.1
VPS29-209ENST00000551655 KCNB2Q92953 911 aa15.68■□□□□ 0.1
VPS29-209ENST00000551655 SPACA7Q96KW9 195 aa15.68■□□□□ 0.1
VPS29-209ENST00000551655 IFT74Q96LB3 600 aa15.68■□□□□ 0.1
VPS29-209ENST00000551655 SLC22A12Q96S37 553 aa15.68■□□□□ 0.1
VPS29-209ENST00000551655 UBL7Q96S82 380 aaPredicted RBP15.68■□□□□ 0.1
VPS29-209ENST00000551655 PHLPP2Q6ZVD8 1323 aa15.68■□□□□ 0.1
VPS29-209ENST00000551655 CCDC169A6NNP5 214 aa15.67■□□□□ 0.1
VPS29-209ENST00000551655 SGK1O00141 431 aa15.67■□□□□ 0.1
VPS29-209ENST00000551655 SERPINF2P08697 491 aa15.67■□□□□ 0.1
VPS29-209ENST00000551655 CXCL8P10145 99 aa15.67■□□□□ 0.1
VPS29-209ENST00000551655 HMGA1P17096 107 aaKnown RBP15.67■□□□□ 0.1
VPS29-209ENST00000551655 PROZP22891 400 aa15.67■□□□□ 0.1
VPS29-209ENST00000551655 IFNAR2P48551 515 aa15.67■□□□□ 0.1
VPS29-209ENST00000551655 DMP1Q13316 513 aaPredicted RBP15.67■□□□□ 0.1
VPS29-209ENST00000551655 TXNDC5Q8NBS9 432 aaKnown RBP15.67■□□□□ 0.1
VPS29-209ENST00000551655 PIP4K2CQ8TBX8 421 aa15.67■□□□□ 0.1
VPS29-209ENST00000551655 WHAMMQ8TF30 809 aa15.67■□□□□ 0.1
VPS29-209ENST00000551655 OSCP1Q8WVF1 389 aa15.67■□□□□ 0.1
VPS29-209ENST00000551655 HMGB4Q8WW32 186 aa15.67■□□□□ 0.1
VPS29-209ENST00000551655 CYP2S1Q96SQ9 504 aa15.67■□□□□ 0.1
VPS29-209ENST00000551655 MRPL4Q9BYD3 311 aaKnown RBP15.67■□□□□ 0.1
VPS29-209ENST00000551655 TMEM60Q9H2L4 133 aa15.67■□□□□ 0.1
VPS29-209ENST00000551655 LINC00597Q9H2U6 94 aa15.67■□□□□ 0.1
VPS29-209ENST00000551655 KIF9Q9HAQ2 790 aa15.67■□□□□ 0.1
VPS29-209ENST00000551655 TUFT1Q9NNX1 390 aa15.67■□□□□ 0.1
VPS29-209ENST00000551655 BCCIPQ9P287 314 aaKnown RBP eCLIP15.67■□□□□ 0.1
VPS29-209ENST00000551655 PCDHB9Q9Y5E1 797 aa15.67■□□□□ 0.1
VPS29-209ENST00000551655 MYO18BQ8IUG5 2567 aa15.66■□□□□ 0.1
VPS29-209ENST00000551655 ARHGAP33O14559 1287 aa15.66■□□□□ 0.1
VPS29-209ENST00000551655 TADA3O75528 432 aa15.66■□□□□ 0.1
VPS29-209ENST00000551655 KLF8O95600 359 aaPredicted RBP15.66■□□□□ 0.1
VPS29-209ENST00000551655 LRPAP1P30533 357 aa15.66■□□□□ 0.1
VPS29-209ENST00000551655 PEX3P56589 373 aa15.66■□□□□ 0.1
VPS29-209ENST00000551655 NBR1Q14596 966 aa15.66■□□□□ 0.1
VPS29-209ENST00000551655 ZNF77Q15935 545 aa15.66■□□□□ 0.1
VPS29-209ENST00000551655 EMC10Q5UCC4 262 aa15.66■□□□□ 0.1
VPS29-209ENST00000551655 SDHAF4Q5VUM1 108 aa15.66■□□□□ 0.1
VPS29-209ENST00000551655 ARMCX5Q6P1M9 558 aa15.66■□□□□ 0.1
VPS29-209ENST00000551655 MPZL3Q6UWV2 235 aa15.66■□□□□ 0.1
VPS29-209ENST00000551655 TOGARAM2Q6ZUX3 1019 aa15.66■□□□□ 0.1
VPS29-209ENST00000551655 NAXDQ8IW45 347 aa15.66■□□□□ 0.1
VPS29-209ENST00000551655 EFCAB13Q8IY85 973 aa15.66■□□□□ 0.1
VPS29-209ENST00000551655 FAM177A1Q8N128 213 aaPredicted RBP15.66■□□□□ 0.1
VPS29-209ENST00000551655 SPRYD3Q8NCJ5 442 aa15.66■□□□□ 0.1
VPS29-209ENST00000551655 TNFRSF25Q93038 417 aa15.66■□□□□ 0.1
VPS29-209ENST00000551655 EXOC4Q96A65 974 aa15.66■□□□□ 0.1
VPS29-209ENST00000551655 DCBLD2Q96PD2 775 aa15.66■□□□□ 0.1
VPS29-209ENST00000551655 MTMR9Q96QG7 549 aa15.66■□□□□ 0.1
VPS29-209ENST00000551655 OXCT2Q9BYC2 517 aaPredicted RBP15.66■□□□□ 0.1
VPS29-209ENST00000551655 DNAAF2Q9NVR5 837 aaKnown RBP15.66■□□□□ 0.1
VPS29-209ENST00000551655 MAGED2Q9UNF1 606 aaPredicted RBP15.66■□□□□ 0.1
VPS29-209ENST00000551655 RAI2Q9Y5P3 530 aa15.66■□□□□ 0.1
VPS29-209ENST00000551655 NEMFO60524 1076 aa15.65■□□□□ 0.1
VPS29-209ENST00000551655 GJB3O75712 270 aa15.65■□□□□ 0.1
VPS29-209ENST00000551655 ALDH1A2O94788 518 aa15.65■□□□□ 0.1
VPS29-209ENST00000551655 CHRM1P11229 460 aaPredicted RBP15.65■□□□□ 0.1
VPS29-209ENST00000551655 TIE1P35590 1138 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms