RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 GLT8D2Q9H1C3 349 aa12.85□□□□□ -0.35
ERBB3-219ENST00000551242 DDX4Q9NQI0 724 aaKnown RBP12.85□□□□□ -0.35
ERBB3-219ENST00000551242 SEL1LQ9UBV2 794 aa12.85□□□□□ -0.35
ERBB3-219ENST00000551242 TTC36A6NLP5 189 aa12.84□□□□□ -0.35
ERBB3-219ENST00000551242 CAPN14A8MX76 684 aa12.84□□□□□ -0.35
ERBB3-219ENST00000551242 TM9SF1O15321 606 aa12.84□□□□□ -0.35
ERBB3-219ENST00000551242 PROSCO94903 275 aa12.84□□□□□ -0.35
ERBB3-219ENST00000551242 MAGEA10P43363 369 aaPredicted RBP12.84□□□□□ -0.35
ERBB3-219ENST00000551242 HIRAP54198 1017 aaPredicted RBP12.84□□□□□ -0.35
ERBB3-219ENST00000551242 PLCB3Q01970 1234 aa12.84□□□□□ -0.35
ERBB3-219ENST00000551242 MSLNQ13421 630 aaPredicted RBP12.84□□□□□ -0.35
ERBB3-219ENST00000551242 RNASEH2BQ5TBB1 312 aaKnown RBP12.84□□□□□ -0.35
ERBB3-219ENST00000551242 TRMT1LQ7Z2T5 733 aaKnown RBP12.84□□□□□ -0.35
ERBB3-219ENST00000551242 PDSS2Q86YH6 399 aa12.84□□□□□ -0.35
ERBB3-219ENST00000551242 LARGE2Q8N3Y3 721 aa12.84□□□□□ -0.35
ERBB3-219ENST00000551242 PYROXD1Q8WU10 500 aa12.84□□□□□ -0.35
ERBB3-219ENST00000551242 VTI1AQ96AJ9 217 aa12.84□□□□□ -0.35
ERBB3-219ENST00000551242 WDR18Q9BV38 432 aa12.84□□□□□ -0.35
ERBB3-219ENST00000551242 SRP68Q9UHB9 627 aaKnown RBP12.84□□□□□ -0.35
ERBB3-219ENST00000551242 UBE4BO95155 1302 aa12.84□□□□□ -0.35
ERBB3-219ENST00000551242 SORBS2O94875 1100 aaKnown RBP12.84□□□□□ -0.35
ERBB3-219ENST00000551242 CYP3A4P08684 503 aa12.84□□□□□ -0.35
ERBB3-219ENST00000551242 MAGEA8P43361 318 aa12.84□□□□□ -0.35
ERBB3-219ENST00000551242 ALDH18A1P54886 795 aaKnown RBP12.84□□□□□ -0.35
ERBB3-219ENST00000551242 HIF1AQ16665 826 aa12.84□□□□□ -0.35
ERBB3-219ENST00000551242 FNBP1LQ5T0N5 605 aa12.84□□□□□ -0.35
ERBB3-219ENST00000551242 ANKRD22Q5VYY1 191 aa12.84□□□□□ -0.35
ERBB3-219ENST00000551242 ADGRD1Q6QNK2 874 aa12.84□□□□□ -0.35
ERBB3-219ENST00000551242 PRPF39Q86UA1 669 aaKnown RBP12.84□□□□□ -0.35
ERBB3-219ENST00000551242 CBWD2Q8IUF1 395 aa12.84□□□□□ -0.35
ERBB3-219ENST00000551242 RHOT1Q8IXI2 618 aa12.84□□□□□ -0.35
ERBB3-219ENST00000551242 ZNF513Q8N8E2 541 aaPredicted RBP12.84□□□□□ -0.35
ERBB3-219ENST00000551242 XXYLT1Q8NBI6 393 aa12.84□□□□□ -0.35
ERBB3-219ENST00000551242 HIPK4Q8NE63 616 aa12.84□□□□□ -0.35
ERBB3-219ENST00000551242 TAS1R2Q8TE23 839 aa12.84□□□□□ -0.35
ERBB3-219ENST00000551242 ABTB1Q969K4 478 aaPredicted RBP12.84□□□□□ -0.35
ERBB3-219ENST00000551242 RBM17Q96I25 401 aaKnown RBP12.84□□□□□ -0.35
ERBB3-219ENST00000551242 SERAC1Q96JX3 654 aa12.84□□□□□ -0.35
ERBB3-219ENST00000551242 WDR83Q9BRX9 315 aaKnown RBP12.84□□□□□ -0.35
ERBB3-219ENST00000551242 MECRQ9BV79 373 aa12.84□□□□□ -0.35
ERBB3-219ENST00000551242 SMYD3Q9H7B4 428 aa12.84□□□□□ -0.35
ERBB3-219ENST00000551242 SSU72Q9NP77 194 aaKnown RBP12.84□□□□□ -0.35
ERBB3-219ENST00000551242 SERPINB13Q9UIV8 391 aa12.84□□□□□ -0.35
ERBB3-219ENST00000551242 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.83□□□□□ -0.36
ERBB3-219ENST00000551242 CCDC160A6NGH7 325 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 C6orf229H3BNL8 230 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 ATP2A1O14983 1001 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 P4HA2O15460 535 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 MT-ND3P03897 115 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 VCLP18206 1134 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 PEX2P28328 305 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 SHMT1P34896 483 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 PDE1BQ01064 536 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 NFX1Q12986 1120 aaKnown RBP12.83□□□□□ -0.36
ERBB3-219ENST00000551242 ALCAMQ13740 583 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 NCOA4Q13772 614 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 MORF4L2Q15014 288 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 FAM182AQ5T1J6 154 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 PASD1Q8IV76 773 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 USP6NLQ92738 828 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 C11orf70Q9BRQ4 267 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 CDCA7Q9BWT1 371 aaPredicted RBP12.83□□□□□ -0.36
ERBB3-219ENST00000551242 STRA6Q9BX79 667 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 ADAMTS6Q9UKP5 1117 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 BLOC1S6Q9UL45 172 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 ZNF510Q9Y2H8 683 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 ARHGAP42A6NI28 874 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 SGK1O00141 431 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 TGDSO95455 350 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 CFHP08603 1231 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 UNGP13051 313 aaPredicted RBP12.83□□□□□ -0.36
ERBB3-219ENST00000551242 ETV4P43268 484 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 ASPHQ12797 758 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 IKQ13123 557 aaPredicted RBP12.83□□□□□ -0.36
ERBB3-219ENST00000551242 HNRNPDQ14103 355 aaKnown RBP12.83□□□□□ -0.36
ERBB3-219ENST00000551242 CCDC174Q6PII3 467 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 DHDDSQ86SQ9 333 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 RHPN2Q8IUC4 686 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 ARID3BQ8IVW6 561 aaPredicted RBP12.83□□□□□ -0.36
ERBB3-219ENST00000551242 ALLCQ8N6M5 410 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.83□□□□□ -0.366e-7■□□□□ 9.6
ERBB3-219ENST00000551242 DCAKDQ8WVC6 231 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 TUFT1Q9NNX1 390 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 CD209Q9NNX6 404 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 PCDHGA4Q9Y5G9 962 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 SMCHD1A6NHR9 2005 aa12.83□□□□□ -0.36
ERBB3-219ENST00000551242 IGLV3-22A0A075B6J6 115 aa12.82□□□□□ -0.36
ERBB3-219ENST00000551242 CCDC195A0A1B0GUA6 201 aa12.82□□□□□ -0.36
ERBB3-219ENST00000551242 PRR5-ARHGAP8B1AHC4 643 aa12.82□□□□□ -0.36
ERBB3-219ENST00000551242 SPECC1L-ADORA2AF8WAN1 911 aa12.82□□□□□ -0.36
ERBB3-219ENST00000551242 TMCC1O94876 653 aa12.82□□□□□ -0.36
ERBB3-219ENST00000551242 UQCRBP14927 111 aa12.82□□□□□ -0.36
ERBB3-219ENST00000551242 DESP17661 470 aa12.82□□□□□ -0.36
ERBB3-219ENST00000551242 ARHGAP8P85298 464 aa12.82□□□□□ -0.36
ERBB3-219ENST00000551242 UBAP2LQ14157 1087 aaKnown RBP12.82□□□□□ -0.36
ERBB3-219ENST00000551242 MMEL1Q495T6 779 aa12.82□□□□□ -0.36
ERBB3-219ENST00000551242 MFSD7Q6UXD7 560 aa12.82□□□□□ -0.36
ERBB3-219ENST00000551242 RBM44Q6ZP01 1051 aaKnown RBP12.82□□□□□ -0.36
ERBB3-219ENST00000551242 SLC26A7Q8TE54 656 aa12.82□□□□□ -0.36
ERBB3-219ENST00000551242 FAM172AQ8WUF8 416 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms