RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 GARTP22102 1010 aa23.35■■□□□ 1.33
SMARCC2-210ENST00000550519 DDX6P26196 483 aaKnown RBP eCLIP23.35■■□□□ 1.33
SMARCC2-210ENST00000550519 POLR2BP30876 1174 aaKnown RBP23.35■■□□□ 1.33
SMARCC2-210ENST00000550519 AVPR1AP37288 418 aa23.35■■□□□ 1.33
SMARCC2-210ENST00000550519 TSPY1Q01534 308 aa23.35■■□□□ 1.33
SMARCC2-210ENST00000550519 SRSF5Q13243 272 aaKnown RBP23.35■■□□□ 1.33
SMARCC2-210ENST00000550519 MAB21L3Q8N8X9 362 aa23.35■■□□□ 1.33
SMARCC2-210ENST00000550519 USP13Q92995 863 aaPredicted RBP23.35■■□□□ 1.33
SMARCC2-210ENST00000550519 SAAL1Q96ER3 474 aa23.35■■□□□ 1.33
SMARCC2-210ENST00000550519 ACBD6Q9BR61 282 aa23.35■■□□□ 1.33
SMARCC2-210ENST00000550519 PI4K2AQ9BTU6 479 aa23.35■■□□□ 1.33
SMARCC2-210ENST00000550519 HPS4Q9NQG7 708 aa23.35■■□□□ 1.33
SMARCC2-210ENST00000550519 L1RE1Q9UN81 338 aa23.35■■□□□ 1.33
SMARCC2-210ENST00000550519 CCL26Q9Y258 94 aa23.35■■□□□ 1.33
SMARCC2-210ENST00000550519 PCDHB13Q9Y5F0 798 aa23.35■■□□□ 1.33
SMARCC2-210ENST00000550519 FRMD3A2A2Y4 597 aa23.34■■□□□ 1.33
SMARCC2-210ENST00000550519 PRPF40AO75400 957 aaKnown RBP23.34■■□□□ 1.33
SMARCC2-210ENST00000550519 HOXC13P31276 330 aa23.34■■□□□ 1.33
SMARCC2-210ENST00000550519 TXLNAP40222 546 aa23.34■■□□□ 1.33
SMARCC2-210ENST00000550519 GPR15P49685 360 aa23.34■■□□□ 1.33
SMARCC2-210ENST00000550519 CASP5P51878 434 aa23.34■■□□□ 1.33
SMARCC2-210ENST00000550519 RESTQ13127 1097 aa23.34■■□□□ 1.33
SMARCC2-210ENST00000550519 RUNX3Q13761 415 aa23.34■■□□□ 1.33
SMARCC2-210ENST00000550519 HEATR6Q6AI08 1181 aaKnown RBP23.34■■□□□ 1.33
SMARCC2-210ENST00000550519 SCARA3Q6AZY7 606 aa23.34■■□□□ 1.33
SMARCC2-210ENST00000550519 WDR5BQ86VZ2 330 aa23.34■■□□□ 1.33
SMARCC2-210ENST00000550519 LRRC52Q8N7C0 313 aa23.34■■□□□ 1.33
SMARCC2-210ENST00000550519 CACTINQ8WUQ7 758 aaKnown RBP23.34■■□□□ 1.33
SMARCC2-210ENST00000550519 KIF9Q9HAQ2 790 aa23.34■■□□□ 1.33
SMARCC2-210ENST00000550519 ABCB6Q9NP58 842 aa23.34■■□□□ 1.33
SMARCC2-210ENST00000550519 TDP1Q9NUW8 608 aa23.34■■□□□ 1.33
SMARCC2-210ENST00000550519 RBAKQ9NYW8 714 aaPredicted RBP23.34■■□□□ 1.33
SMARCC2-210ENST00000550519 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.34■■□□□ 1.33
SMARCC2-210ENST00000550519 ALCAMQ13740 583 aa23.33■■□□□ 1.33
SMARCC2-210ENST00000550519 TMEM196Q5HYL7 178 aa23.33■■□□□ 1.33
SMARCC2-210ENST00000550519 TXNDC8Q6A555 127 aa23.33■■□□□ 1.33
SMARCC2-210ENST00000550519 FAM173BQ6P4H8 233 aa23.33■■□□□ 1.33
SMARCC2-210ENST00000550519 MON1AQ86VX9 555 aa23.33■■□□□ 1.33
SMARCC2-210ENST00000550519 TMEM86AQ8N2M4 240 aa23.33■■□□□ 1.33
SMARCC2-210ENST00000550519 CHFRQ96EP1 664 aa23.33■■□□□ 1.33
SMARCC2-210ENST00000550519 PKMYT1Q99640 499 aa23.33■■□□□ 1.33
SMARCC2-210ENST00000550519 SEMA4GQ9NTN9 838 aa23.33■■□□□ 1.33
SMARCC2-210ENST00000550519 GDAP2Q9NXN4 497 aa23.33■■□□□ 1.33
SMARCC2-210ENST00000550519 DDX43Q9NXZ2 648 aaKnown RBP23.33■■□□□ 1.33
SMARCC2-210ENST00000550519 MORC2Q9Y6X9 1032 aaPredicted RBP23.33■■□□□ 1.33
SMARCC2-210ENST00000550519 OTOL1A6NHN0 477 aaPredicted RBP23.32■■□□□ 1.32
SMARCC2-210ENST00000550519 TRDMT1O14717 391 aaKnown RBP23.32■■□□□ 1.32
SMARCC2-210ENST00000550519 HUS1O60921 280 aa23.32■■□□□ 1.32
SMARCC2-210ENST00000550519 IDEP14735 1019 aa23.32■■□□□ 1.32
SMARCC2-210ENST00000550519 BFSP1Q12934 665 aa23.32■■□□□ 1.32
SMARCC2-210ENST00000550519 INTS6LQ5JSJ4 861 aaKnown RBP23.32■■□□□ 1.32
SMARCC2-210ENST00000550519 SDHAF4Q5VUM1 108 aa23.32■■□□□ 1.32
SMARCC2-210ENST00000550519 TRIM68Q6AZZ1 485 aa23.32■■□□□ 1.32
SMARCC2-210ENST00000550519 PKN3Q6P5Z2 889 aa23.32■■□□□ 1.32
SMARCC2-210ENST00000550519 CCDC73Q6ZRK6 1079 aa23.32■■□□□ 1.32
SMARCC2-210ENST00000550519 CSGALNACT2Q8N6G5 542 aa23.32■■□□□ 1.32
SMARCC2-210ENST00000550519 STKLD1Q8NE28 680 aa23.32■■□□□ 1.32
SMARCC2-210ENST00000550519 RIN3Q8TB24 985 aa23.32■■□□□ 1.32
SMARCC2-210ENST00000550519 MRPS31Q92665 395 aaKnown RBP23.32■■□□□ 1.32
SMARCC2-210ENST00000550519 FAM84AQ96KN4 292 aa23.32■■□□□ 1.32
SMARCC2-210ENST00000550519 CBWD1Q9BRT8 395 aa23.32■■□□□ 1.32
SMARCC2-210ENST00000550519 FGFBP2Q9BYJ0 223 aa23.32■■□□□ 1.32
SMARCC2-210ENST00000550519 EBF3Q9H4W6 596 aa23.32■■□□□ 1.32
SMARCC2-210ENST00000550519 ITGA11Q9UKX5 1188 aa23.32■■□□□ 1.32
SMARCC2-210ENST00000550519 MAGED2Q9UNF1 606 aaPredicted RBP23.32■■□□□ 1.32
SMARCC2-210ENST00000550519 KIF26AQ9ULI4 1882 aaPredicted RBP23.31■■□□□ 1.32
SMARCC2-210ENST00000550519 A0A087X0B3 334 aa23.31■■□□□ 1.32
SMARCC2-210ENST00000550519 DCDC2BA2VCK2 349 aa23.31■■□□□ 1.32
SMARCC2-210ENST00000550519 GOLGA8IPA6NC78 632 aa23.31■■□□□ 1.32
SMARCC2-210ENST00000550519 GOLGA8JA6NMD2 632 aa23.31■■□□□ 1.32
SMARCC2-210ENST00000550519 EXTL3O43909 919 aa23.31■■□□□ 1.32
SMARCC2-210ENST00000550519 TADA3O75528 432 aa23.31■■□□□ 1.32
SMARCC2-210ENST00000550519 NOL4O94818 638 aa23.31■■□□□ 1.32
SMARCC2-210ENST00000550519 SYT1P21579 422 aa23.31■■□□□ 1.32
SMARCC2-210ENST00000550519 CYP2F1P24903 491 aa23.31■■□□□ 1.32
SMARCC2-210ENST00000550519 RPL10AP62906 217 aaKnown RBP23.31■■□□□ 1.32
SMARCC2-210ENST00000550519 MYL7Q01449 175 aa23.31■■□□□ 1.32
SMARCC2-210ENST00000550519 ZNF268Q14587 947 aaPredicted RBP23.31■■□□□ 1.32
SMARCC2-210ENST00000550519 CSRP2Q16527 193 aa23.31■■□□□ 1.32
SMARCC2-210ENST00000550519 DDR2Q16832 855 aa23.31■■□□□ 1.32
SMARCC2-210ENST00000550519 FSTL4Q6MZW2 842 aa23.31■■□□□ 1.32
SMARCC2-210ENST00000550519 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.31■■□□□ 1.32
SMARCC2-210ENST00000550519 SYCP3Q8IZU3 236 aa23.31■■□□□ 1.32
SMARCC2-210ENST00000550519 SPATA18Q8TC71 538 aa23.31■■□□□ 1.32
SMARCC2-210ENST00000550519 NETO1Q8TDF5 533 aa23.31■■□□□ 1.32
SMARCC2-210ENST00000550519 TRMT2BQ96GJ1 504 aaKnown RBP23.31■■□□□ 1.32
SMARCC2-210ENST00000550519 MYRFLQ96LU7 910 aa23.31■■□□□ 1.32
SMARCC2-210ENST00000550519 UXTQ9UBK9 157 aaPredicted RBP23.31■■□□□ 1.32
SMARCC2-210ENST00000550519 SIX4Q9UIU6 781 aa23.31■■□□□ 1.32
SMARCC2-210ENST00000550519 GTF3C4Q9UKN8 822 aa23.31■■□□□ 1.32
SMARCC2-210ENST00000550519 TPRP12270 2363 aaKnown RBP23.3■■□□□ 1.32
SMARCC2-210ENST00000550519 TCHHQ07283 1943 aa23.3■■□□□ 1.32
SMARCC2-210ENST00000550519 TULP1O00294 542 aaPredicted RBP23.3■■□□□ 1.32
SMARCC2-210ENST00000550519 GABRDO14764 452 aa23.3■■□□□ 1.32
SMARCC2-210ENST00000550519 ACAT1P24752 427 aaKnown RBP23.3■■□□□ 1.32
SMARCC2-210ENST00000550519 CEBPZQ03701 1054 aaKnown RBP23.3■■□□□ 1.32
SMARCC2-210ENST00000550519 GRSF1Q12849 480 aaKnown RBP eCLIP23.3■■□□□ 1.32
SMARCC2-210ENST00000550519 PRR23CQ6ZRP0 262 aa23.3■■□□□ 1.32
SMARCC2-210ENST00000550519 OSTM1Q86WC4 334 aa23.3■■□□□ 1.32
SMARCC2-210ENST00000550519 FAM160A2Q8N612 972 aaPredicted RBP23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms