RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, human

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5C-206	ENST00000550406	UCHL3	P15374	230 aa		13.91	□□□□□ -0.18
RAB5C-206	ENST00000550406	PCSK1	P29120	753 aa		13.91	□□□□□ -0.18
RAB5C-206	ENST00000550406	LTBR	P36941	435 aa		13.91	□□□□□ -0.18
RAB5C-206	ENST00000550406	ARHGAP44	Q17R89	818 aa		13.91	□□□□□ -0.18
RAB5C-206	ENST00000550406	LLGL2	Q6P1M3	1020 aa		13.91	□□□□□ -0.18
RAB5C-206	ENST00000550406	TMEM184A	Q6ZMB5	413 aa		13.91	□□□□□ -0.18
RAB5C-206	ENST00000550406	PAQR9	Q6ZVX9	377 aa		13.91	□□□□□ -0.18
RAB5C-206	ENST00000550406	EFHB	Q8N7U6	833 aa		13.91	□□□□□ -0.18
RAB5C-206	ENST00000550406	B3GALNT2	Q8NCR0	500 aa		13.91	□□□□□ -0.18
RAB5C-206	ENST00000550406	PGLYRP2	Q96PD5	576 aa		13.91	□□□□□ -0.18
RAB5C-206	ENST00000550406	CDCA3	Q99618	268 aa	Predicted RBP	13.91	□□□□□ -0.18
RAB5C-206	ENST00000550406	NOTCH4	Q99466	2003 aa		13.91	□□□□□ -0.18
RAB5C-206	ENST00000550406		A0A1W2PQC6	194 aa		13.9	□□□□□ -0.18
RAB5C-206	ENST00000550406	FOXN3	O00409	490 aa	Predicted RBP	13.9	□□□□□ -0.18
RAB5C-206	ENST00000550406	GLUD1	P00367	558 aa		13.9	□□□□□ -0.18
RAB5C-206	ENST00000550406	PNMA6A	P0CW24	399 aa	Predicted RBP	13.9	□□□□□ -0.18
RAB5C-206	ENST00000550406	CPB1	P15086	417 aa		13.9	□□□□□ -0.18
RAB5C-206	ENST00000550406	ATF2	P15336	505 aa		13.9	□□□□□ -0.18
RAB5C-206	ENST00000550406	ZNF132	P52740	706 aa		13.9	□□□□□ -0.18
RAB5C-206	ENST00000550406	DLX2	Q07687	328 aa	Predicted RBP	13.9	□□□□□ -0.18
RAB5C-206	ENST00000550406	ZNF394	Q53GI3	561 aa		13.9	□□□□□ -0.18
RAB5C-206	ENST00000550406	TPGS2	Q68CL5	300 aa		13.9	□□□□□ -0.18
RAB5C-206	ENST00000550406	SARM1	Q6SZW1	724 aa		13.9	□□□□□ -0.18
RAB5C-206	ENST00000550406	ENOSF1	Q7L5Y1	443 aa		13.9	□□□□□ -0.18
RAB5C-206	ENST00000550406	DCP1B	Q8IZD4	617 aa	Known RBP	13.9	□□□□□ -0.18
RAB5C-206	ENST00000550406	TTC9B	Q8N6N2	239 aa		13.9	□□□□□ -0.18
RAB5C-206	ENST00000550406	C12orf29	Q8N999	325 aa		13.9	□□□□□ -0.18
RAB5C-206	ENST00000550406	ATAD1	Q8NBU5	361 aa		13.9	□□□□□ -0.18
RAB5C-206	ENST00000550406	KREMEN2	Q8NCW0	462 aa		13.9	□□□□□ -0.18
RAB5C-206	ENST00000550406	MYCBPAP	Q8TBZ2	947 aa		13.9	□□□□□ -0.18
RAB5C-206	ENST00000550406	SHC3	Q92529	594 aa		13.9	□□□□□ -0.18
RAB5C-206	ENST00000550406	TMEM176A	Q96HP8	235 aa		13.9	□□□□□ -0.18
RAB5C-206	ENST00000550406	ZSWIM1	Q9BR11	485 aa		13.9	□□□□□ -0.18
RAB5C-206	ENST00000550406	NT5C1A	Q9BXI3	368 aa		13.9	□□□□□ -0.18
RAB5C-206	ENST00000550406	B3GNT5	Q9BYG0	378 aa		13.9	□□□□□ -0.18
RAB5C-206	ENST00000550406	RHOBTB2	Q9BYZ6	727 aa		13.9	□□□□□ -0.18
RAB5C-206	ENST00000550406	FAM124B	Q9H5Z6	455 aa	Predicted RBP	13.9	□□□□□ -0.18
RAB5C-206	ENST00000550406	FAM207A	Q9NSI2	230 aa	Predicted RBP	13.9	□□□□□ -0.18
RAB5C-206	ENST00000550406	CLEC1B	Q9P126	229 aa		13.9	□□□□□ -0.18
RAB5C-206	ENST00000550406	AFF4	Q9UHB7	1163 aa	Known RBP	13.9	□□□□□ -0.18
RAB5C-206	ENST00000550406	FBXW11	Q9UKB1	542 aa		13.9	□□□□□ -0.18
RAB5C-206	ENST00000550406	PCDHB4	Q9Y5E5	795 aa		13.9	□□□□□ -0.18
RAB5C-206	ENST00000550406	ZNF638	Q14966	1978 aa	Known RBP	13.89	□□□□□ -0.19
RAB5C-206	ENST00000550406	CLCN1	P35523	988 aa		13.89	□□□□□ -0.19
RAB5C-206	ENST00000550406	MFAP3	P55082	362 aa		13.89	□□□□□ -0.19
RAB5C-206	ENST00000550406	JAM2	P57087	298 aa		13.89	□□□□□ -0.19
RAB5C-206	ENST00000550406	POLR2F	P61218	127 aa	Known RBP	13.89	□□□□□ -0.19
RAB5C-206	ENST00000550406	TSPY1	Q01534	308 aa		13.89	□□□□□ -0.19
RAB5C-206	ENST00000550406	ADCY1	Q08828	1119 aa		13.89	□□□□□ -0.19
RAB5C-206	ENST00000550406	DUSP4	Q13115	394 aa		13.89	□□□□□ -0.19
RAB5C-206	ENST00000550406	DRAP1	Q14919	205 aa	Predicted RBP	13.89	□□□□□ -0.19
RAB5C-206	ENST00000550406	UVSSA	Q2YD98	709 aa		13.89	□□□□□ -0.19
RAB5C-206	ENST00000550406	MDH1B	Q5I0G3	518 aa		13.89	□□□□□ -0.19
RAB5C-206	ENST00000550406	TMEM270	Q6UE05	265 aa		13.89	□□□□□ -0.19
RAB5C-206	ENST00000550406	PPFIBP1	Q86W92	1011 aa		13.89	□□□□□ -0.19
RAB5C-206	ENST00000550406	TCEAL8	Q8IYN2	117 aa		13.89	□□□□□ -0.19
RAB5C-206	ENST00000550406	MYLPF	Q96A32	169 aa		13.89	□□□□□ -0.19
RAB5C-206	ENST00000550406	JAKMIP2	Q96AA8	810 aa		13.89	□□□□□ -0.19
RAB5C-206	ENST00000550406	PCED1B	Q96HM7	432 aa		13.89	□□□□□ -0.19
RAB5C-206	ENST00000550406	TTYH3	Q9C0H2	523 aa		13.89	□□□□□ -0.19
RAB5C-206	ENST00000550406	ACP6	Q9NPH0	428 aa		13.89	□□□□□ -0.19
RAB5C-206	ENST00000550406	MAN1C1	Q9NR34	630 aa		13.89	□□□□□ -0.19
RAB5C-206	ENST00000550406	TMEM30A	Q9NV96	361 aa		13.89	□□□□□ -0.19
RAB5C-206	ENST00000550406	SLC27A5	Q9Y2P5	690 aa		13.89	□□□□□ -0.19
RAB5C-206	ENST00000550406	PATJ	Q8NI35	1801 aa		13.89	□□□□□ -0.19
RAB5C-206	ENST00000550406	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.88	□□□□□ -0.19
RAB5C-206	ENST00000550406	CLDN5	O00501	218 aa		13.88	□□□□□ -0.19
RAB5C-206	ENST00000550406	TBX10	O75333	385 aa		13.88	□□□□□ -0.19
RAB5C-206	ENST00000550406	CYP2F1	P24903	491 aa		13.88	□□□□□ -0.19
RAB5C-206	ENST00000550406	CACNA2D1	P54289	1103 aa		13.88	□□□□□ -0.19
RAB5C-206	ENST00000550406	YWHAE	P62258	255 aa	Known RBP	13.88	□□□□□ -0.19
RAB5C-206	ENST00000550406	SYCE2	Q6PIF2	218 aa		13.88	□□□□□ -0.19
RAB5C-206	ENST00000550406	FUK	Q8N0W3	1084 aa		13.88	□□□□□ -0.19
RAB5C-206	ENST00000550406	TTC39C	Q8N584	583 aa		13.88	□□□□□ -0.19
RAB5C-206	ENST00000550406	C12orf76	Q8N812	135 aa	Predicted RBP	13.88	□□□□□ -0.19
RAB5C-206	ENST00000550406	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.88	□□□□□ -0.19
RAB5C-206	ENST00000550406	NEK11	Q8NG66	645 aa		13.88	□□□□□ -0.19
RAB5C-206	ENST00000550406	PPM1E	Q8WY54	764 aa		13.88	□□□□□ -0.19
RAB5C-206	ENST00000550406	TFAP2B	Q92481	460 aa		13.88	□□□□□ -0.19
RAB5C-206	ENST00000550406	PPP2R3C	Q969Q6	453 aa		13.88	□□□□□ -0.19
RAB5C-206	ENST00000550406	TNIP3	Q96KP6	325 aa		13.88	□□□□□ -0.19
RAB5C-206	ENST00000550406	FAM81B	Q96LP2	452 aa		13.88	□□□□□ -0.19
RAB5C-206	ENST00000550406	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.88	□□□□□ -0.19
RAB5C-206	ENST00000550406	STK33	Q9BYT3	514 aa		13.88	□□□□□ -0.19
RAB5C-206	ENST00000550406	NLRC4	Q9NPP4	1024 aa		13.88	□□□□□ -0.19
RAB5C-206	ENST00000550406	CEP72	Q9P209	647 aa		13.88	□□□□□ -0.19
RAB5C-206	ENST00000550406	PCDHB5	Q9Y5E4	795 aa		13.88	□□□□□ -0.19
RAB5C-206	ENST00000550406	DENND4C	Q5VZ89	1909 aa		13.88	□□□□□ -0.19
RAB5C-206	ENST00000550406	RFPL2	O75678	378 aa		13.87	□□□□□ -0.19
RAB5C-206	ENST00000550406	SOAT2	O75908	522 aa		13.87	□□□□□ -0.19
RAB5C-206	ENST00000550406	PAPLN	O95428	1278 aa		13.87	□□□□□ -0.19
RAB5C-206	ENST00000550406	HAPLN1	P10915	354 aa	Predicted RBP	13.87	□□□□□ -0.19
RAB5C-206	ENST00000550406	CCDC130	P13994	396 aa		13.87	□□□□□ -0.19
RAB5C-206	ENST00000550406	BDNF	P23560	247 aa		13.87	□□□□□ -0.19
RAB5C-206	ENST00000550406	RAPGEF1	Q13905	1077 aa		13.87	□□□□□ -0.19
RAB5C-206	ENST00000550406	NFE2	Q16621	373 aa	Predicted RBP	13.87	□□□□□ -0.19
RAB5C-206	ENST00000550406	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	13.87	□□□□□ -0.19
RAB5C-206	ENST00000550406	ANKRD54	Q6NXT1	300 aa		13.87	□□□□□ -0.19
RAB5C-206	ENST00000550406	FAM71A	Q8IYT1	594 aa		13.87	□□□□□ -0.19
RAB5C-206	ENST00000550406	SPPL2B	Q8TCT7	592 aa		13.87	□□□□□ -0.19

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