RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 DNAJB7Q7Z6W7 309 aaPredicted RBP18.44■□□□□ 0.54
CHMP1A-208ENST00000550102 SPATA2LQ8IUW3 424 aaPredicted RBP18.44■□□□□ 0.54
CHMP1A-208ENST00000550102 ST13P5Q8NFI4 369 aaPredicted RBP18.44■□□□□ 0.54
CHMP1A-208ENST00000550102 SHKBP1Q8TBC3 707 aa18.44■□□□□ 0.54
CHMP1A-208ENST00000550102 FUBP3Q96I24 572 aaKnown RBP eCLIP18.44■□□□□ 0.54
CHMP1A-208ENST00000550102 GCNAQ96QF7 691 aa18.44■□□□□ 0.54
CHMP1A-208ENST00000550102 LPIN3Q9BQK8 851 aa18.44■□□□□ 0.54
CHMP1A-208ENST00000550102 PI4K2AQ9BTU6 479 aa18.44■□□□□ 0.54
CHMP1A-208ENST00000550102 MKNK1Q9BUB5 465 aa18.44■□□□□ 0.54
CHMP1A-208ENST00000550102 LRRC3Q9BY71 257 aa18.44■□□□□ 0.54
CHMP1A-208ENST00000550102 SLITRK6Q9H5Y7 841 aa18.44■□□□□ 0.54
CHMP1A-208ENST00000550102 NXF1Q9UBU9 619 aaKnown RBP18.44■□□□□ 0.54
CHMP1A-208ENST00000550102 GTF3C4Q9UKN8 822 aa18.44■□□□□ 0.54
CHMP1A-208ENST00000550102 MIA3Q5JRA6 1907 aa18.44■□□□□ 0.54
CHMP1A-208ENST00000550102 MYH10P35580 1976 aa18.44■□□□□ 0.54
CHMP1A-208ENST00000550102 TICRRQ7Z2Z1 1910 aa18.43■□□□□ 0.54
CHMP1A-208ENST00000550102 MOSPD3O75425 235 aa18.43■□□□□ 0.54
CHMP1A-208ENST00000550102 ECI2O75521 394 aa18.43■□□□□ 0.54
CHMP1A-208ENST00000550102 VNN1O95497 513 aa18.43■□□□□ 0.54
CHMP1A-208ENST00000550102 C4BPAP04003 597 aaKnown RBP18.43■□□□□ 0.54
CHMP1A-208ENST00000550102 CFHP08603 1231 aa18.43■□□□□ 0.54
CHMP1A-208ENST00000550102 TRIM49P0CI25 452 aa18.43■□□□□ 0.54
CHMP1A-208ENST00000550102 TRIM49CP0CI26 452 aa18.43■□□□□ 0.54
CHMP1A-208ENST00000550102 PSMC1P62191 440 aaKnown RBP18.43■□□□□ 0.54
CHMP1A-208ENST00000550102 UBE2HP62256 183 aa18.43■□□□□ 0.54
CHMP1A-208ENST00000550102 TAF12Q16514 161 aa18.43■□□□□ 0.54
CHMP1A-208ENST00000550102 CCDC142Q17RM4 750 aa18.43■□□□□ 0.54
CHMP1A-208ENST00000550102 CFAP221Q4G0U5 840 aa18.43■□□□□ 0.54
CHMP1A-208ENST00000550102 ZNF667Q5HYK9 610 aa18.43■□□□□ 0.54
CHMP1A-208ENST00000550102 C4orf50Q6ZRC1 276 aa18.43■□□□□ 0.54
CHMP1A-208ENST00000550102 MFSD1Q9H3U5 465 aa18.43■□□□□ 0.54
CHMP1A-208ENST00000550102 ZNF334Q9HCZ1 680 aaPredicted RBP18.43■□□□□ 0.54
CHMP1A-208ENST00000550102 SLC2A4RGQ9NR83 387 aa18.43■□□□□ 0.54
CHMP1A-208ENST00000550102 RAPGEFL1Q9UHV5 662 aa18.43■□□□□ 0.54
CHMP1A-208ENST00000550102 COL4A2P08572 1712 aa18.43■□□□□ 0.54
CHMP1A-208ENST00000550102 KIF26AQ9ULI4 1882 aaPredicted RBP18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 A0A1W2PRU2 124 aa18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 NRG2O14511 850 aaPredicted RBP18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 PSMA7O14818 248 aa18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 CETN3O15182 167 aa18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 PDGFBP01127 241 aaPredicted RBP18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 FAM163BP0C2L3 166 aa18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 EPB41P11171 864 aaKnown RBP18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 P4HA1P13674 534 aa18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 GJA1P17302 382 aa18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 LMO2P25791 158 aa18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 PPP1R2P41236 205 aa18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 RPL10AP62906 217 aaKnown RBP18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 LRRC63Q05C16 580 aa18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 TEAD2Q15562 447 aa18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 FAM78AQ5JUQ0 283 aa18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 C1orf220Q5T0J3 134 aa18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 SCARA5Q6ZMJ2 495 aa18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 SV2AQ7L0J3 742 aa18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 ADSSL1Q8N142 457 aa18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 SIX5Q8N196 739 aa18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 OR6B3Q8NGW1 331 aa18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 GIPC2Q8TF65 315 aa18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 TAF4BQ92750 862 aa18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 SMARCD2Q92925 531 aa18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 MYLPFQ96A32 169 aa18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 ASB16Q96NS5 453 aa18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 MRPL45Q9BRJ2 306 aaKnown RBP18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 RPP25Q9BUL9 199 aaKnown RBP18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 IMPG2Q9BZV3 1241 aa18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 GPR88Q9GZN0 384 aa18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 KCNH6Q9H252 994 aa18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 SMYD3Q9H7B4 428 aa18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 CRTAC1Q9NQ79 661 aa18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 WNT16Q9UBV4 365 aa18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 MAN1B1Q9UKM7 699 aa18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 HELZP42694 1942 aaKnown RBP18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 ANAPC1Q9H1A4 1944 aa18.42■□□□□ 0.54
CHMP1A-208ENST00000550102 MYBPHLA2RUH7 354 aa18.41■□□□□ 0.54
CHMP1A-208ENST00000550102 ATP2C2O75185 946 aa18.41■□□□□ 0.54
CHMP1A-208ENST00000550102 PDGFRBP09619 1106 aa18.41■□□□□ 0.54
CHMP1A-208ENST00000550102 FCARP24071 287 aa18.41■□□□□ 0.54
CHMP1A-208ENST00000550102 CYP2F1P24903 491 aa18.41■□□□□ 0.54
CHMP1A-208ENST00000550102 GABRR2P28476 465 aa18.41■□□□□ 0.54
CHMP1A-208ENST00000550102 CDC25CP30307 473 aa18.41■□□□□ 0.54
CHMP1A-208ENST00000550102 GNL1P36915 607 aaPredicted RBP18.41■□□□□ 0.54
CHMP1A-208ENST00000550102 MAGEA11P43364 429 aa18.41■□□□□ 0.54
CHMP1A-208ENST00000550102 ARHGAP15Q53QZ3 475 aa18.41■□□□□ 0.54
CHMP1A-208ENST00000550102 FAM171BQ6P995 826 aa18.41■□□□□ 0.54
CHMP1A-208ENST00000550102 GAREM2Q75VX8 874 aa18.41■□□□□ 0.54
CHMP1A-208ENST00000550102 ZSCAN18Q8TBC5 510 aaPredicted RBP18.41■□□□□ 0.54
CHMP1A-208ENST00000550102 GPR152Q8TDT2 470 aa18.41■□□□□ 0.54
CHMP1A-208ENST00000550102 ELSPBP1Q96BH3 223 aa18.41■□□□□ 0.54
CHMP1A-208ENST00000550102 PATJQ8NI35 1801 aa18.41■□□□□ 0.54
CHMP1A-208ENST00000550102 SLC16A3O15427 465 aaKnown RBP18.4■□□□□ 0.54
CHMP1A-208ENST00000550102 ASS1P00966 412 aaKnown RBP18.4■□□□□ 0.54
CHMP1A-208ENST00000550102 HLA-DRAP01903 254 aa18.4■□□□□ 0.54
CHMP1A-208ENST00000550102 CSH1P0DML2 217 aa18.4■□□□□ 0.54
CHMP1A-208ENST00000550102 CSH2P0DML3 217 aa18.4■□□□□ 0.54
CHMP1A-208ENST00000550102 GCLMP48507 274 aa18.4■□□□□ 0.54
CHMP1A-208ENST00000550102 SGSM1Q2NKQ1 1148 aa18.4■□□□□ 0.54
CHMP1A-208ENST00000550102 MDH1BQ5I0G3 518 aa18.4■□□□□ 0.54
CHMP1A-208ENST00000550102 POTEHQ6S545 545 aa18.4■□□□□ 0.54
CHMP1A-208ENST00000550102 ZC3H3Q8IXZ2 948 aaKnown RBP18.4■□□□□ 0.54
CHMP1A-208ENST00000550102 EEF2KMTQ96G04 330 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms