RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 PCDHB5Q9Y5E4 795 aa12.65□□□□□ -0.38
LETMD1-221ENST00000550100 PCDHA5Q9Y5H7 936 aa12.65□□□□□ -0.38
LETMD1-221ENST00000550100 USP34Q70CQ2 3546 aa12.65□□□□□ -0.38
LETMD1-221ENST00000550100 ZNF197O14709 1029 aa12.65□□□□□ -0.38
LETMD1-221ENST00000550100 PRPF40AO75400 957 aaKnown RBP12.65□□□□□ -0.38
LETMD1-221ENST00000550100 ECI2O75521 394 aa12.65□□□□□ -0.38
LETMD1-221ENST00000550100 RAP1GAPP47736 663 aa12.65□□□□□ -0.38
LETMD1-221ENST00000550100 TUFMP49411 452 aaKnown RBP12.65□□□□□ -0.38
LETMD1-221ENST00000550100 CYP4F8P98187 520 aa12.65□□□□□ -0.38
LETMD1-221ENST00000550100 FAM160A1Q05DH4 1040 aa12.65□□□□□ -0.38
LETMD1-221ENST00000550100 PPP3CAQ08209 521 aa12.65□□□□□ -0.38
LETMD1-221ENST00000550100 WDR72Q3MJ13 1102 aa12.65□□□□□ -0.38
LETMD1-221ENST00000550100 ISM2Q6H9L7 571 aa12.65□□□□□ -0.38
LETMD1-221ENST00000550100 VITQ6UXI7 678 aa12.65□□□□□ -0.38
LETMD1-221ENST00000550100 MTSS1LQ765P7 747 aa12.65□□□□□ -0.38
LETMD1-221ENST00000550100 DPH6Q7L8W6 267 aa12.65□□□□□ -0.38
LETMD1-221ENST00000550100 SUGP1Q8IWZ8 645 aaKnown RBP12.65□□□□□ -0.38
LETMD1-221ENST00000550100 DCP1BQ8IZD4 617 aaKnown RBP12.65□□□□□ -0.38
LETMD1-221ENST00000550100 ZSCAN18Q8TBC5 510 aaPredicted RBP12.65□□□□□ -0.38
LETMD1-221ENST00000550100 SPPL2BQ8TCT7 592 aa12.65□□□□□ -0.38
LETMD1-221ENST00000550100 MMS19Q96T76 1030 aa12.65□□□□□ -0.38
LETMD1-221ENST00000550100 SMYD3Q9H7B4 428 aa12.65□□□□□ -0.38
LETMD1-221ENST00000550100 NXF1Q9UBU9 619 aaKnown RBP12.65□□□□□ -0.38
LETMD1-221ENST00000550100 ARIH1Q9Y4X5 557 aaPredicted RBP12.65□□□□□ -0.38
LETMD1-221ENST00000550100 DENND4CQ5VZ89 1909 aa12.64□□□□□ -0.39
LETMD1-221ENST00000550100 F11P03951 625 aa12.64□□□□□ -0.39
LETMD1-221ENST00000550100 TRIM49P0CI25 452 aa12.64□□□□□ -0.39
LETMD1-221ENST00000550100 TRIM49CP0CI26 452 aa12.64□□□□□ -0.39
LETMD1-221ENST00000550100 GLULP15104 373 aa12.64□□□□□ -0.39
LETMD1-221ENST00000550100 CD72P21854 359 aa12.64□□□□□ -0.39
LETMD1-221ENST00000550100 BMP6P22004 513 aa12.64□□□□□ -0.39
LETMD1-221ENST00000550100 GABRR2P28476 465 aa12.64□□□□□ -0.39
LETMD1-221ENST00000550100 PLA2G5P39877 138 aa12.64□□□□□ -0.39
LETMD1-221ENST00000550100 LHX1P48742 406 aa12.64□□□□□ -0.39
LETMD1-221ENST00000550100 CLCN5P51795 746 aa12.64□□□□□ -0.39
LETMD1-221ENST00000550100 CACNA2D1P54289 1103 aa12.64□□□□□ -0.39
LETMD1-221ENST00000550100 TSPY1Q01534 308 aa12.64□□□□□ -0.39
LETMD1-221ENST00000550100 PLD1Q13393 1074 aa12.64□□□□□ -0.39
LETMD1-221ENST00000550100 NFIL3Q16649 462 aa12.64□□□□□ -0.39
LETMD1-221ENST00000550100 SPOPLQ6IQ16 392 aa12.64□□□□□ -0.39
LETMD1-221ENST00000550100 SV2AQ7L0J3 742 aa12.64□□□□□ -0.39
LETMD1-221ENST00000550100 TMC2Q8TDI7 906 aa12.64□□□□□ -0.39
LETMD1-221ENST00000550100 C2orf15Q8WU43 125 aaKnown RBP12.64□□□□□ -0.39
LETMD1-221ENST00000550100 SMARCD2Q92925 531 aa12.64□□□□□ -0.39
LETMD1-221ENST00000550100 ELSPBP1Q96BH3 223 aa12.64□□□□□ -0.39
LETMD1-221ENST00000550100 SYT15Q9BQS2 421 aa12.64□□□□□ -0.39
LETMD1-221ENST00000550100 SLC46A2Q9BY10 475 aa12.64□□□□□ -0.39
LETMD1-221ENST00000550100 FOXQ1Q9C009 403 aa12.64□□□□□ -0.39
LETMD1-221ENST00000550100 SMG9Q9H0W8 520 aaKnown RBP12.64□□□□□ -0.39
LETMD1-221ENST00000550100 TRPV4Q9HBA0 871 aa12.64□□□□□ -0.39
LETMD1-221ENST00000550100 ASB3Q9Y575 518 aa12.64□□□□□ -0.39
LETMD1-221ENST00000550100 PIEZO1Q92508 2521 aa12.64□□□□□ -0.39
LETMD1-221ENST00000550100 CACNA1IQ9P0X4 2223 aa12.64□□□□□ -0.39
LETMD1-221ENST00000550100 PTPRDP23468 1912 aa12.64□□□□□ -0.39
LETMD1-221ENST00000550100 WDR87Q6ZQQ6 2873 aa12.63□□□□□ -0.39
LETMD1-221ENST00000550100 GREB1Q4ZG55 1949 aa12.63□□□□□ -0.39
LETMD1-221ENST00000550100 CLDN5O00501 218 aa12.63□□□□□ -0.39
LETMD1-221ENST00000550100 CALUO43852 315 aaPredicted RBP12.63□□□□□ -0.39
LETMD1-221ENST00000550100 TACC1O75410 805 aa12.63□□□□□ -0.39
LETMD1-221ENST00000550100 TADA3O75528 432 aa12.63□□□□□ -0.39
LETMD1-221ENST00000550100 PRAMEF12O95522 483 aa12.63□□□□□ -0.39
LETMD1-221ENST00000550100 STAU1O95793 577 aaKnown RBP12.63□□□□□ -0.39
LETMD1-221ENST00000550100 CD44P16070 742 aaKnown RBP12.63□□□□□ -0.39
LETMD1-221ENST00000550100 NR2F2P24468 414 aa12.63□□□□□ -0.39
LETMD1-221ENST00000550100 GNL1P36915 607 aaPredicted RBP12.63□□□□□ -0.39
LETMD1-221ENST00000550100 MCCD1P59942 119 aaPredicted RBP12.63□□□□□ -0.39
LETMD1-221ENST00000550100 MYL7Q01449 175 aa12.63□□□□□ -0.39
LETMD1-221ENST00000550100 NHLH1Q02575 133 aa12.63□□□□□ -0.39
LETMD1-221ENST00000550100 NCOA4Q13772 614 aa12.63□□□□□ -0.39
LETMD1-221ENST00000550100 ZACNQ401N2 412 aa12.63□□□□□ -0.39
LETMD1-221ENST00000550100 SLC44A4Q53GD3 710 aa12.63□□□□□ -0.39
LETMD1-221ENST00000550100 ARID3BQ8IVW6 561 aaPredicted RBP12.63□□□□□ -0.39
LETMD1-221ENST00000550100 RIN3Q8TB24 985 aa12.63□□□□□ -0.39
LETMD1-221ENST00000550100 SPATA18Q8TC71 538 aa12.63□□□□□ -0.39
LETMD1-221ENST00000550100 FAM200AQ8TCP9 573 aa12.63□□□□□ -0.39
LETMD1-221ENST00000550100 MYLPFQ96A32 169 aa12.63□□□□□ -0.39
LETMD1-221ENST00000550100 ATXN3LQ9H3M9 355 aa12.63□□□□□ -0.39
LETMD1-221ENST00000550100 MFSD1Q9H3U5 465 aa12.63□□□□□ -0.39
LETMD1-221ENST00000550100 VRTNQ9H8Y1 702 aa12.63□□□□□ -0.39
LETMD1-221ENST00000550100 TBC1D17Q9HA65 648 aa12.63□□□□□ -0.39
LETMD1-221ENST00000550100 APOBEC3GQ9HC16 384 aaKnown RBP12.63□□□□□ -0.39
LETMD1-221ENST00000550100 ZFP14Q9HCL3 533 aa12.63□□□□□ -0.39
LETMD1-221ENST00000550100 ARHGEF3Q9NR81 526 aa12.63□□□□□ -0.39
LETMD1-221ENST00000550100 TRIM49BA6NDI0 452 aa12.62□□□□□ -0.39
LETMD1-221ENST00000550100 GOLGA6L4A6NEF3 574 aa12.62□□□□□ -0.39
LETMD1-221ENST00000550100 SLC38A8A6NNN8 435 aa12.62□□□□□ -0.39
LETMD1-221ENST00000550100 HEPACAM2A8MVW5 462 aa12.62□□□□□ -0.39
LETMD1-221ENST00000550100 PHACTR2O75167 634 aa12.62□□□□□ -0.39
LETMD1-221ENST00000550100 HLA-DRAP01903 254 aa12.62□□□□□ -0.39
LETMD1-221ENST00000550100 DCNP07585 359 aaKnown RBP12.62□□□□□ -0.39
LETMD1-221ENST00000550100 AOC1P19801 751 aa12.62□□□□□ -0.39
LETMD1-221ENST00000550100 BDNFP23560 247 aa12.62□□□□□ -0.39
LETMD1-221ENST00000550100 GCLMP48507 274 aa12.62□□□□□ -0.39
LETMD1-221ENST00000550100 VAMP7P51809 220 aa12.62□□□□□ -0.39
LETMD1-221ENST00000550100 NLRP12P59046 1061 aa12.62□□□□□ -0.39
LETMD1-221ENST00000550100 STARD6P59095 220 aa12.62□□□□□ -0.39
LETMD1-221ENST00000550100 USP46P62068 366 aa12.62□□□□□ -0.39
LETMD1-221ENST00000550100 SMARCB1Q12824 385 aa12.62□□□□□ -0.39
LETMD1-221ENST00000550100 ORC1Q13415 861 aa12.62□□□□□ -0.39
LETMD1-221ENST00000550100 ADAM9Q13443 819 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms