RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 PLD1Q13393 1074 aa10.48□□□□□ -0.73
HDAC7-229ENST00000549883 BIRC3Q13489 604 aa10.48□□□□□ -0.73
HDAC7-229ENST00000549883 WDR72Q3MJ13 1102 aa10.48□□□□□ -0.73
HDAC7-229ENST00000549883 CYP4A22Q5TCH4 519 aa10.48□□□□□ -0.73
HDAC7-229ENST00000549883 FAM171BQ6P995 826 aa10.48□□□□□ -0.73
HDAC7-229ENST00000549883 TMEM150AQ86TG1 271 aa10.48□□□□□ -0.73
HDAC7-229ENST00000549883 TMEM86AQ8N2M4 240 aa10.48□□□□□ -0.73
HDAC7-229ENST00000549883 ELMOD1Q8N336 334 aa10.48□□□□□ -0.73
HDAC7-229ENST00000549883 PRSS33Q8NF86 280 aa10.48□□□□□ -0.73
HDAC7-229ENST00000549883 SPATA20Q8TB22 786 aa10.48□□□□□ -0.73
HDAC7-229ENST00000549883 FAM200AQ8TCP9 573 aa10.48□□□□□ -0.73
HDAC7-229ENST00000549883 TMEM174Q8WUU8 243 aa10.48□□□□□ -0.73
HDAC7-229ENST00000549883 CCDC47Q96A33 483 aaKnown RBP10.48□□□□□ -0.73
HDAC7-229ENST00000549883 ASB16Q96NS5 453 aa10.48□□□□□ -0.73
HDAC7-229ENST00000549883 LRRC3BQ96PB8 259 aa10.48□□□□□ -0.73
HDAC7-229ENST00000549883 SYT15Q9BQS2 421 aa10.48□□□□□ -0.73
HDAC7-229ENST00000549883 TMEM30AQ9NV96 361 aa10.48□□□□□ -0.73
HDAC7-229ENST00000549883 MAN1B1Q9UKM7 699 aa10.48□□□□□ -0.73
HDAC7-229ENST00000549883 FBXL21Q9UKT6 434 aa10.48□□□□□ -0.73
HDAC7-229ENST00000549883 CIZ1Q9ULV3 898 aaPredicted RBP10.48□□□□□ -0.73
HDAC7-229ENST00000549883 PCDHB5Q9Y5E4 795 aa10.48□□□□□ -0.73
HDAC7-229ENST00000549883 ZFP37Q9Y6Q3 630 aaPredicted RBP10.48□□□□□ -0.73
HDAC7-229ENST00000549883 MIA3Q5JRA6 1907 aa10.47□□□□□ -0.73
HDAC7-229ENST00000549883 CLDN5O00501 218 aa10.47□□□□□ -0.73
HDAC7-229ENST00000549883 CALUO43852 315 aaPredicted RBP10.47□□□□□ -0.73
HDAC7-229ENST00000549883 PHACTR2O75167 634 aa10.47□□□□□ -0.73
HDAC7-229ENST00000549883 GABRR2P28476 465 aa10.47□□□□□ -0.73
HDAC7-229ENST00000549883 GCLMP48507 274 aa10.47□□□□□ -0.73
HDAC7-229ENST00000549883 LHX1P48742 406 aa10.47□□□□□ -0.73
HDAC7-229ENST00000549883 VAMP7P51809 220 aa10.47□□□□□ -0.73
HDAC7-229ENST00000549883 MYL7Q01449 175 aa10.47□□□□□ -0.73
HDAC7-229ENST00000549883 ORC1Q13415 861 aa10.47□□□□□ -0.73
HDAC7-229ENST00000549883 ADAM9Q13443 819 aa10.47□□□□□ -0.73
HDAC7-229ENST00000549883 TRPC3Q13507 836 aa10.47□□□□□ -0.73
HDAC7-229ENST00000549883 NCOA4Q13772 614 aa10.47□□□□□ -0.73
HDAC7-229ENST00000549883 ZACNQ401N2 412 aa10.47□□□□□ -0.73
HDAC7-229ENST00000549883 ZNF658Q5TYW1 1059 aaPredicted RBP10.47□□□□□ -0.73
HDAC7-229ENST00000549883 ANKRD40Q6AI12 368 aa10.47□□□□□ -0.73
HDAC7-229ENST00000549883 VITQ6UXI7 678 aa10.47□□□□□ -0.73
HDAC7-229ENST00000549883 SCARA5Q6ZMJ2 495 aa10.47□□□□□ -0.73
HDAC7-229ENST00000549883 SV2AQ7L0J3 742 aa10.47□□□□□ -0.73
HDAC7-229ENST00000549883 SUGP1Q8IWZ8 645 aaKnown RBP10.47□□□□□ -0.73
HDAC7-229ENST00000549883 DCP1BQ8IZD4 617 aaKnown RBP10.47□□□□□ -0.73
HDAC7-229ENST00000549883 FLCNQ8NFG4 579 aa10.47□□□□□ -0.73
HDAC7-229ENST00000549883 ZSCAN18Q8TBC5 510 aaPredicted RBP10.47□□□□□ -0.73
HDAC7-229ENST00000549883 SPPL2BQ8TCT7 592 aa10.47□□□□□ -0.73
HDAC7-229ENST00000549883 TMC2Q8TDI7 906 aa10.47□□□□□ -0.73
HDAC7-229ENST00000549883 SMARCE1Q969G3 411 aa10.47□□□□□ -0.73
HDAC7-229ENST00000549883 NXPE3Q969Y0 559 aa10.47□□□□□ -0.73
HDAC7-229ENST00000549883 MYLPFQ96A32 169 aa10.47□□□□□ -0.73
HDAC7-229ENST00000549883 TIGD1Q96MW7 591 aa10.47□□□□□ -0.73
HDAC7-229ENST00000549883 SMG9Q9H0W8 520 aaKnown RBP10.47□□□□□ -0.73
HDAC7-229ENST00000549883 MMRN2Q9H8L6 949 aa10.47□□□□□ -0.73
HDAC7-229ENST00000549883 SLC2A4RGQ9NR83 387 aa10.47□□□□□ -0.73
HDAC7-229ENST00000549883 GDE1Q9NZC3 331 aa10.47□□□□□ -0.73
HDAC7-229ENST00000549883 CHMP5Q9NZZ3 219 aa10.47□□□□□ -0.73
HDAC7-229ENST00000549883 HSFX1Q9UBD0 423 aa10.47□□□□□ -0.73
HDAC7-229ENST00000549883 HMGXB4Q9UGU5 601 aa10.47□□□□□ -0.73
HDAC7-229ENST00000549883 HCN4Q9Y3Q4 1203 aa10.47□□□□□ -0.73
HDAC7-229ENST00000549883 R3HCC1Q9Y3T6 440 aaKnown RBP10.47□□□□□ -0.73
HDAC7-229ENST00000549883 SHISA7A6NL88 538 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 BIN1O00499 593 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 ZNF197O14709 1029 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 ECI2O75521 394 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 TADA3O75528 432 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 MICAL2O94851 1124 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 PRAMEF12O95522 483 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 STAU1O95793 577 aaKnown RBP10.46□□□□□ -0.73
HDAC7-229ENST00000549883 HLA-DRAP01903 254 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 CD72P21854 359 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 BDNFP23560 247 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 PCSK1P29120 753 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 GNL1P36915 607 aaPredicted RBP10.46□□□□□ -0.73
HDAC7-229ENST00000549883 TUFMP49411 452 aaKnown RBP10.46□□□□□ -0.73
HDAC7-229ENST00000549883 TNNC1P63316 161 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 TCF15Q12870 199 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 NFIL3Q16649 462 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 ZNF699Q32M78 642 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 MDH1BQ5I0G3 518 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 GPR158Q5T848 1215 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 ASTLQ6HA08 431 aaPredicted RBP10.46□□□□□ -0.73
HDAC7-229ENST00000549883 MTSS1LQ765P7 747 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 DPH6Q7L8W6 267 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 SPATA2LQ8IUW3 424 aaPredicted RBP10.46□□□□□ -0.73
HDAC7-229ENST00000549883 SCN4BQ8IWT1 228 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 FAM186BQ8IYM0 893 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 ADSSL1Q8N142 457 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 OR6B3Q8NGW1 331 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 TAS1R2Q8TE23 839 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 C2orf15Q8WU43 125 aaKnown RBP10.46□□□□□ -0.73
HDAC7-229ENST00000549883 SEMA4DQ92854 862 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 SMARCD2Q92925 531 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 PCED1BQ96HM7 432 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 GSDMAQ96QA5 445 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 PHOX2BQ99453 314 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 SLC46A2Q9BY10 475 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 B3GNT5Q9BYG0 378 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 FOXQ1Q9C009 403 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 ATXN3LQ9H3M9 355 aa10.46□□□□□ -0.73
HDAC7-229ENST00000549883 MFSD1Q9H3U5 465 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms