RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 ODC1P11926 461 aa18.56■□□□□ 0.56
HDAC7-227ENST00000548080 MFAP3P55082 362 aa18.56■□□□□ 0.56
HDAC7-227ENST00000548080 MYL6P60660 151 aa18.56■□□□□ 0.56
HDAC7-227ENST00000548080 NCOA4Q13772 614 aa18.56■□□□□ 0.56
HDAC7-227ENST00000548080 WSCD1Q658N2 575 aa18.56■□□□□ 0.56
HDAC7-227ENST00000548080 ANKS3Q6ZW76 656 aa18.56■□□□□ 0.56
HDAC7-227ENST00000548080 CCDC170Q8IYT3 715 aa18.56■□□□□ 0.56
HDAC7-227ENST00000548080 LRRC52Q8N7C0 313 aa18.56■□□□□ 0.56
HDAC7-227ENST00000548080 APPL2Q8NEU8 664 aa18.56■□□□□ 0.56
HDAC7-227ENST00000548080 FAM81BQ96LP2 452 aa18.56■□□□□ 0.56
HDAC7-227ENST00000548080 TMEM209Q96SK2 561 aa18.56■□□□□ 0.56
HDAC7-227ENST00000548080 NHEJ1Q9H9Q4 299 aaPredicted RBP18.56■□□□□ 0.56
HDAC7-227ENST00000548080 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.56■□□□□ 0.56
HDAC7-227ENST00000548080 COG5Q9UP83 839 aa18.56■□□□□ 0.56
HDAC7-227ENST00000548080 R3HCC1Q9Y3T6 440 aaKnown RBP18.56■□□□□ 0.56
HDAC7-227ENST00000548080 SNX9Q9Y5X1 595 aa18.56■□□□□ 0.56
HDAC7-227ENST00000548080 SPDYE4A6NLX3 237 aa18.55■□□□□ 0.56
HDAC7-227ENST00000548080 F8VZ95 297 aa18.55■□□□□ 0.56
HDAC7-227ENST00000548080 TGM5O43548 720 aa18.55■□□□□ 0.56
HDAC7-227ENST00000548080 GLUD1P00367 558 aa18.55■□□□□ 0.56
HDAC7-227ENST00000548080 WEE2P0C1S8 567 aa18.55■□□□□ 0.56
HDAC7-227ENST00000548080 FERP16591 822 aa18.55■□□□□ 0.56
HDAC7-227ENST00000548080 CYLC1P35663 651 aaPredicted RBP18.55■□□□□ 0.56
HDAC7-227ENST00000548080 SOX5P35711 763 aa18.55■□□□□ 0.56
HDAC7-227ENST00000548080 YWHAHQ04917 246 aaPredicted RBP18.55■□□□□ 0.56
HDAC7-227ENST00000548080 TRPC3Q13507 836 aa18.55■□□□□ 0.56
HDAC7-227ENST00000548080 MRPL58Q14197 206 aaKnown RBP18.55■□□□□ 0.56
HDAC7-227ENST00000548080 ARHGAP44Q17R89 818 aa18.55■□□□□ 0.56
HDAC7-227ENST00000548080 HGSNATQ68CP4 663 aa18.55■□□□□ 0.56
HDAC7-227ENST00000548080 OVOS1Q6IE37 1185 aa18.55■□□□□ 0.56
HDAC7-227ENST00000548080 ZNF280DQ6N043 979 aa18.55■□□□□ 0.56
HDAC7-227ENST00000548080 TOGARAM2Q6ZUX3 1019 aa18.55■□□□□ 0.56
HDAC7-227ENST00000548080 ENOSF1Q7L5Y1 443 aa18.55■□□□□ 0.56
HDAC7-227ENST00000548080 IRF2BP2Q7Z5L9 587 aa18.55■□□□□ 0.56
HDAC7-227ENST00000548080 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.55■□□□□ 0.56
HDAC7-227ENST00000548080 CCAR2Q8N163 923 aaKnown RBP18.55■□□□□ 0.56
HDAC7-227ENST00000548080 PPM1KQ8N3J5 372 aa18.55■□□□□ 0.56
HDAC7-227ENST00000548080 TATDN2Q93075 761 aa18.55■□□□□ 0.56
HDAC7-227ENST00000548080 PI4K2AQ9BTU6 479 aa18.55■□□□□ 0.56
HDAC7-227ENST00000548080 MAN1C1Q9NR34 630 aa18.55■□□□□ 0.56
HDAC7-227ENST00000548080 ARHGAP20Q9P2F6 1191 aa18.55■□□□□ 0.56
HDAC7-227ENST00000548080 L1RE1Q9UN81 338 aa18.55■□□□□ 0.56
HDAC7-227ENST00000548080 EPN1Q9Y6I3 576 aaPredicted RBP18.55■□□□□ 0.56
HDAC7-227ENST00000548080 TCF20Q9UGU0 1960 aaKnown RBP18.55■□□□□ 0.56
HDAC7-227ENST00000548080 CCP110O43303 1012 aa18.54■□□□□ 0.56
HDAC7-227ENST00000548080 HCRTO43612 131 aa18.54■□□□□ 0.56
HDAC7-227ENST00000548080 NCK2O43639 380 aa18.54■□□□□ 0.56
HDAC7-227ENST00000548080 EIF4A3P38919 411 aaKnown RBP18.54■□□□□ 0.56
HDAC7-227ENST00000548080 PNPLA4P41247 253 aa18.54■□□□□ 0.56
HDAC7-227ENST00000548080 CREMQ03060 361 aa18.54■□□□□ 0.56
HDAC7-227ENST00000548080 ARID5AQ03989 594 aa18.54■□□□□ 0.56
HDAC7-227ENST00000548080 KLHL30Q0D2K2 578 aa18.54■□□□□ 0.56
HDAC7-227ENST00000548080 MAPK8IP2Q13387 824 aaPredicted RBP18.54■□□□□ 0.56
HDAC7-227ENST00000548080 RARS2Q5T160 578 aaKnown RBP18.54■□□□□ 0.56
HDAC7-227ENST00000548080 ANKRD54Q6NXT1 300 aa18.54■□□□□ 0.56
HDAC7-227ENST00000548080 SYCE2Q6PIF2 218 aa18.54■□□□□ 0.56
HDAC7-227ENST00000548080 GPIHBP1Q8IV16 184 aa18.54■□□□□ 0.56
HDAC7-227ENST00000548080 CASP10Q92851 521 aa18.54■□□□□ 0.56
HDAC7-227ENST00000548080 MSLNLQ96KJ4 702 aa18.54■□□□□ 0.56
HDAC7-227ENST00000548080 CCDC42Q96M95 316 aa18.54■□□□□ 0.56
HDAC7-227ENST00000548080 KREMEN1Q96MU8 473 aa18.54■□□□□ 0.56
HDAC7-227ENST00000548080 IMPG2Q9BZV3 1241 aa18.54■□□□□ 0.56
HDAC7-227ENST00000548080 GPR88Q9GZN0 384 aa18.54■□□□□ 0.56
HDAC7-227ENST00000548080 SPTLC3Q9NUV7 552 aa18.54■□□□□ 0.56
HDAC7-227ENST00000548080 POLIQ9UNA4 740 aa18.54■□□□□ 0.56
HDAC7-227ENST00000548080 BZW2Q9Y6E2 419 aaKnown RBP18.54■□□□□ 0.56
HDAC7-227ENST00000548080 MTCL1Q9Y4B5 1905 aaKnown RBP18.54■□□□□ 0.56
HDAC7-227ENST00000548080 SSU72P8A0A1W2PR75 194 aa18.53■□□□□ 0.56
HDAC7-227ENST00000548080 H7C4K7 107 aa18.53■□□□□ 0.56
HDAC7-227ENST00000548080 FOXN3O00409 490 aaPredicted RBP18.53■□□□□ 0.56
HDAC7-227ENST00000548080 ZSCAN12O43309 604 aa18.53■□□□□ 0.56
HDAC7-227ENST00000548080 TBC1D4O60343 1298 aa18.53■□□□□ 0.56
HDAC7-227ENST00000548080 NDUFA10O95299 355 aa18.53■□□□□ 0.56
HDAC7-227ENST00000548080 PLEKP08567 350 aaPredicted RBP18.53■□□□□ 0.56
HDAC7-227ENST00000548080 CCDC172P0C7W6 258 aa18.53■□□□□ 0.56
HDAC7-227ENST00000548080 TYMPP19971 482 aa18.53■□□□□ 0.56
HDAC7-227ENST00000548080 PRKCIP41743 596 aa18.53■□□□□ 0.56
HDAC7-227ENST00000548080 ROR1Q01973 937 aa18.53■□□□□ 0.56
HDAC7-227ENST00000548080 GCNT1Q02742 428 aa18.53■□□□□ 0.56
HDAC7-227ENST00000548080 MYO1EQ12965 1108 aa18.53■□□□□ 0.56
HDAC7-227ENST00000548080 SGSM1Q2NKQ1 1148 aa18.53■□□□□ 0.56
HDAC7-227ENST00000548080 SCARA5Q6ZMJ2 495 aa18.53■□□□□ 0.56
HDAC7-227ENST00000548080 OSTM1Q86WC4 334 aa18.53■□□□□ 0.56
HDAC7-227ENST00000548080 GPR65Q8IYL9 337 aa18.53■□□□□ 0.56
HDAC7-227ENST00000548080 PDCL2Q8N4E4 241 aa18.53■□□□□ 0.56
HDAC7-227ENST00000548080 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.53■□□□□ 0.56
HDAC7-227ENST00000548080 KAT5Q92993 513 aa18.53■□□□□ 0.56
HDAC7-227ENST00000548080 CD207Q9UJ71 328 aa18.53■□□□□ 0.56
HDAC7-227ENST00000548080 PPP2R2CQ9Y2T4 447 aa18.53■□□□□ 0.56
HDAC7-227ENST00000548080 BACE2Q9Y5Z0 518 aa18.53■□□□□ 0.56
HDAC7-227ENST00000548080 ADGRG1Q9Y653 693 aa18.53■□□□□ 0.56
HDAC7-227ENST00000548080 WDR27A2RRH5 827 aa18.52■□□□□ 0.56
HDAC7-227ENST00000548080 GRXCR2A6NFK2 248 aa18.52■□□□□ 0.56
HDAC7-227ENST00000548080 HUS1O60921 280 aa18.52■□□□□ 0.56
HDAC7-227ENST00000548080 RFPL2O75678 378 aa18.52■□□□□ 0.56
HDAC7-227ENST00000548080 GFPT2O94808 682 aa18.52■□□□□ 0.56
HDAC7-227ENST00000548080 ASS1P00966 412 aaKnown RBP18.52■□□□□ 0.56
HDAC7-227ENST00000548080 CPB1P15086 417 aa18.52■□□□□ 0.56
HDAC7-227ENST00000548080 TDRD12Q587J7 1177 aaKnown RBP18.52■□□□□ 0.56
HDAC7-227ENST00000548080 SPOPLQ6IQ16 392 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms