RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 GAS6Q14393 721 aa14.34□□□□□ -0.11
CPSF6-204ENST00000547486 TAF12Q16514 161 aa14.34□□□□□ -0.11
CPSF6-204ENST00000547486 DDR2Q16832 855 aa14.34□□□□□ -0.11
CPSF6-204ENST00000547486 ARHGAP15Q53QZ3 475 aa14.34□□□□□ -0.11
CPSF6-204ENST00000547486 INTS6LQ5JSJ4 861 aaKnown RBP14.34□□□□□ -0.11
CPSF6-204ENST00000547486 ZC3H14Q6PJT7 736 aaKnown RBP14.34□□□□□ -0.11
CPSF6-204ENST00000547486 TXNDC11Q6PKC3 985 aa14.34□□□□□ -0.11
CPSF6-204ENST00000547486 STXBP4Q6ZWJ1 553 aa14.34□□□□□ -0.11
CPSF6-204ENST00000547486 LIMS2Q7Z4I7 341 aa14.34□□□□□ -0.11
CPSF6-204ENST00000547486 TMEM86AQ8N2M4 240 aa14.34□□□□□ -0.11
CPSF6-204ENST00000547486 DCLK2Q8N568 766 aa14.34□□□□□ -0.11
CPSF6-204ENST00000547486 RDH13Q8NBN7 331 aa14.34□□□□□ -0.11
CPSF6-204ENST00000547486 SPRYD3Q8NCJ5 442 aa14.34□□□□□ -0.11
CPSF6-204ENST00000547486 CSGALNACT1Q8TDX6 532 aa14.34□□□□□ -0.11
CPSF6-204ENST00000547486 SCFD1Q8WVM8 642 aa14.34□□□□□ -0.11
CPSF6-204ENST00000547486 CHRDQ9H2X0 955 aa14.34□□□□□ -0.11
CPSF6-204ENST00000547486 PRMT8Q9NR22 394 aaPredicted RBP14.34□□□□□ -0.11
CPSF6-204ENST00000547486 GTSE1Q9NYZ3 720 aa14.34□□□□□ -0.11
CPSF6-204ENST00000547486 WDR87Q6ZQQ6 2873 aa14.34□□□□□ -0.11
CPSF6-204ENST00000547486 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.33□□□□□ -0.12
CPSF6-204ENST00000547486 DPYSL4O14531 572 aa14.33□□□□□ -0.12
CPSF6-204ENST00000547486 KIAA0391O15091 583 aaKnown RBP14.33□□□□□ -0.12
CPSF6-204ENST00000547486 CLIC2O15247 247 aa14.33□□□□□ -0.12
CPSF6-204ENST00000547486 EIF3DO15371 548 aaKnown RBP eCLIP14.33□□□□□ -0.12
CPSF6-204ENST00000547486 CST3P01034 146 aaPredicted RBP14.33□□□□□ -0.12
CPSF6-204ENST00000547486 TMEM191BP0C7N4 346 aa14.33□□□□□ -0.12
CPSF6-204ENST00000547486 TDGF1P13385 188 aa14.33□□□□□ -0.12
CPSF6-204ENST00000547486 LMO2P25791 158 aa14.33□□□□□ -0.12
CPSF6-204ENST00000547486 KPNA1P52294 538 aaPredicted RBP14.33□□□□□ -0.12
CPSF6-204ENST00000547486 TNK2Q07912 1038 aa14.33□□□□□ -0.12
CPSF6-204ENST00000547486 NFE2Q16621 373 aaPredicted RBP14.33□□□□□ -0.12
CPSF6-204ENST00000547486 DUOXA2Q1HG44 320 aa14.33□□□□□ -0.12
CPSF6-204ENST00000547486 FAM26FQ5R3K3 315 aa14.33□□□□□ -0.12
CPSF6-204ENST00000547486 TXNDC8Q6A555 127 aa14.33□□□□□ -0.12
CPSF6-204ENST00000547486 MAMSTRQ6ZN01 415 aa14.33□□□□□ -0.12
CPSF6-204ENST00000547486 HSCBQ8IWL3 235 aa14.33□□□□□ -0.12
CPSF6-204ENST00000547486 NELFCDQ8IXH7 590 aa14.33□□□□□ -0.12
CPSF6-204ENST00000547486 GRAMD1CQ8IYS0 662 aa14.33□□□□□ -0.12
CPSF6-204ENST00000547486 CMTM8Q8IZV2 173 aa14.33□□□□□ -0.12
CPSF6-204ENST00000547486 TOP6BLQ8N6T0 577 aa14.33□□□□□ -0.12
CPSF6-204ENST00000547486 ZBTB44Q8NCP5 570 aa14.33□□□□□ -0.12
CPSF6-204ENST00000547486 BPIFB1Q8TDL5 484 aa14.33□□□□□ -0.12
CPSF6-204ENST00000547486 LEO1Q8WVC0 666 aaPredicted RBP14.33□□□□□ -0.12
CPSF6-204ENST00000547486 KBTBD7Q8WVZ9 684 aa14.33□□□□□ -0.12
CPSF6-204ENST00000547486 HPDLQ96IR7 371 aa14.33□□□□□ -0.12
CPSF6-204ENST00000547486 ANKRD36BP1Q96IX9 119 aa14.33□□□□□ -0.12
CPSF6-204ENST00000547486 AGPAT3Q9NRZ7 376 aa14.33□□□□□ -0.12
CPSF6-204ENST00000547486 RBM12Q9NTZ6 932 aaKnown RBP14.33□□□□□ -0.12
CPSF6-204ENST00000547486 OBP2AQ9NY56 170 aa14.33□□□□□ -0.12
CPSF6-204ENST00000547486 CCL26Q9Y258 94 aa14.33□□□□□ -0.12
CPSF6-204ENST00000547486 DCHS1Q96JQ0 3298 aa14.33□□□□□ -0.12
CPSF6-204ENST00000547486 COL4A2P08572 1712 aa14.32□□□□□ -0.12
CPSF6-204ENST00000547486 FAM186AA6NE01 2351 aa14.32□□□□□ -0.12
CPSF6-204ENST00000547486 SPECC1L-ADORA2AF8WAN1 911 aa14.32□□□□□ -0.12
CPSF6-204ENST00000547486 KINO60870 393 aaKnown RBP14.32□□□□□ -0.12
CPSF6-204ENST00000547486 LILRB5O75023 590 aa14.32□□□□□ -0.12
CPSF6-204ENST00000547486 ME1P48163 572 aa14.32□□□□□ -0.12
CPSF6-204ENST00000547486 MYL7Q01449 175 aa14.32□□□□□ -0.12
CPSF6-204ENST00000547486 DNM1Q05193 864 aaKnown RBP14.32□□□□□ -0.12
CPSF6-204ENST00000547486 CUL4BQ13620 913 aa14.32□□□□□ -0.12
CPSF6-204ENST00000547486 SNRNP35Q16560 246 aaKnown RBP14.32□□□□□ -0.12
CPSF6-204ENST00000547486 ARHGAP29Q52LW3 1261 aa14.32□□□□□ -0.12
CPSF6-204ENST00000547486 RESP18Q5W5W9 173 aa14.32□□□□□ -0.12
CPSF6-204ENST00000547486 FAM171BQ6P995 826 aa14.32□□□□□ -0.12
CPSF6-204ENST00000547486 UNC13DQ70J99 1090 aa14.32□□□□□ -0.12
CPSF6-204ENST00000547486 TRAPPC11Q7Z392 1133 aa14.32□□□□□ -0.12
CPSF6-204ENST00000547486 ADGRF2Q8IZF7 708 aa14.32□□□□□ -0.12
CPSF6-204ENST00000547486 MAB21L3Q8N8X9 362 aa14.32□□□□□ -0.12
CPSF6-204ENST00000547486 RIN3Q8TB24 985 aa14.32□□□□□ -0.12
CPSF6-204ENST00000547486 ATRIPQ8WXE1 791 aa14.32□□□□□ -0.12
CPSF6-204ENST00000547486 ZNF516Q92618 1163 aa14.32□□□□□ -0.12
CPSF6-204ENST00000547486 USP13Q92995 863 aaPredicted RBP14.32□□□□□ -0.12
CPSF6-204ENST00000547486 GZF1Q9H116 711 aaPredicted RBP14.32□□□□□ -0.12
CPSF6-204ENST00000547486 C8orf33Q9H7E9 229 aaPredicted RBP14.32□□□□□ -0.12
CPSF6-204ENST00000547486 KIAA1586Q9HCI6 787 aa14.32□□□□□ -0.12
CPSF6-204ENST00000547486 ABCB6Q9NP58 842 aa14.32□□□□□ -0.12
CPSF6-204ENST00000547486 SLC39A2Q9NP94 309 aa14.32□□□□□ -0.12
CPSF6-204ENST00000547486 GKN1Q9NS71 199 aa14.32□□□□□ -0.12
CPSF6-204ENST00000547486 ZSCAN32Q9NX65 697 aa14.32□□□□□ -0.12
CPSF6-204ENST00000547486 RCOR1Q9UKL0 485 aa14.32□□□□□ -0.12
CPSF6-204ENST00000547486 MAGED2Q9UNF1 606 aaPredicted RBP14.32□□□□□ -0.12
CPSF6-204ENST00000547486 PCDHGA2Q9Y5H1 932 aa14.32□□□□□ -0.12
CPSF6-204ENST00000547486 F5P12259 2224 aa14.31□□□□□ -0.12
CPSF6-204ENST00000547486 OTOL1A6NHN0 477 aaPredicted RBP14.31□□□□□ -0.12
CPSF6-204ENST00000547486 NOL4O94818 638 aa14.31□□□□□ -0.12
CPSF6-204ENST00000547486 TNNC2P02585 160 aa14.31□□□□□ -0.12
CPSF6-204ENST00000547486 HSP90AA1P07900 732 aaKnown RBP14.31□□□□□ -0.12
CPSF6-204ENST00000547486 CSH1P0DML2 217 aa14.31□□□□□ -0.12
CPSF6-204ENST00000547486 CSH2P0DML3 217 aa14.31□□□□□ -0.12
CPSF6-204ENST00000547486 DLATP10515 647 aaKnown RBP14.31□□□□□ -0.12
CPSF6-204ENST00000547486 HOXC13P31276 330 aa14.31□□□□□ -0.12
CPSF6-204ENST00000547486 CTHP32929 405 aa14.31□□□□□ -0.12
CPSF6-204ENST00000547486 AFMP43652 599 aa14.31□□□□□ -0.12
CPSF6-204ENST00000547486 LHX1P48742 406 aa14.31□□□□□ -0.12
CPSF6-204ENST00000547486 CYP2J2P51589 502 aa14.31□□□□□ -0.12
CPSF6-204ENST00000547486 MYO1EQ12965 1108 aa14.31□□□□□ -0.12
CPSF6-204ENST00000547486 SURF1Q15526 300 aa14.31□□□□□ -0.12
CPSF6-204ENST00000547486 DPH6Q7L8W6 267 aa14.31□□□□□ -0.12
CPSF6-204ENST00000547486 MON1AQ86VX9 555 aa14.31□□□□□ -0.12
CPSF6-204ENST00000547486 WDR49Q8IV35 697 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms