RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 PPM1LQ5SGD2 360 aa12.95□□□□□ -0.34
HDAC7-226ENST00000547259 RSPO2Q6UXX9 243 aaPredicted RBP12.95□□□□□ -0.34
HDAC7-226ENST00000547259 SV2AQ7L0J3 742 aa12.95□□□□□ -0.34
HDAC7-226ENST00000547259 APTXQ7Z2E3 356 aaKnown RBP12.95□□□□□ -0.34
HDAC7-226ENST00000547259 TRAPPC11Q7Z392 1133 aa12.95□□□□□ -0.34
HDAC7-226ENST00000547259 C1orf127Q8N9H9 656 aa12.95□□□□□ -0.34
HDAC7-226ENST00000547259 GPR152Q8TDT2 470 aa12.95□□□□□ -0.34
HDAC7-226ENST00000547259 RSAD2Q8WXG1 361 aa12.95□□□□□ -0.34
HDAC7-226ENST00000547259 IFNKQ9P0W0 207 aa12.95□□□□□ -0.34
HDAC7-226ENST00000547259 FBXW11Q9UKB1 542 aa12.95□□□□□ -0.34
HDAC7-226ENST00000547259 CDH7Q9ULB5 785 aa12.95□□□□□ -0.34
HDAC7-226ENST00000547259 TSC2P49815 1807 aa12.95□□□□□ -0.34
HDAC7-226ENST00000547259 FRYLO94915 3013 aa12.94□□□□□ -0.34
HDAC7-226ENST00000547259 A0A1B0GTH6 734 aa12.94□□□□□ -0.34
HDAC7-226ENST00000547259 CBFA2T2O43439 604 aa12.94□□□□□ -0.34
HDAC7-226ENST00000547259 HLA-DRAP01903 254 aa12.94□□□□□ -0.34
HDAC7-226ENST00000547259 C4BPAP04003 597 aaKnown RBP12.94□□□□□ -0.34
HDAC7-226ENST00000547259 TPM3P06753 285 aa12.94□□□□□ -0.34
HDAC7-226ENST00000547259 UBASH3AP57075 661 aa12.94□□□□□ -0.34
HDAC7-226ENST00000547259 STARD6P59095 220 aa12.94□□□□□ -0.34
HDAC7-226ENST00000547259 UBXN1Q04323 297 aa12.94□□□□□ -0.34
HDAC7-226ENST00000547259 PRKCQQ04759 706 aa12.94□□□□□ -0.34
HDAC7-226ENST00000547259 PSMD5Q16401 504 aa12.94□□□□□ -0.34
HDAC7-226ENST00000547259 FAM171A1Q5VUB5 890 aa12.94□□□□□ -0.34
HDAC7-226ENST00000547259 CEP57Q86XR8 500 aa12.94□□□□□ -0.34
HDAC7-226ENST00000547259 GLYCTKQ8IVS8 523 aa12.94□□□□□ -0.34
HDAC7-226ENST00000547259 C1orf210Q8IVY1 113 aa12.94□□□□□ -0.34
HDAC7-226ENST00000547259 TMEM130Q8N3G9 435 aa12.94□□□□□ -0.34
HDAC7-226ENST00000547259 FBXL13Q8NEE6 735 aa12.94□□□□□ -0.34
HDAC7-226ENST00000547259 ZNF560Q96MR9 790 aa12.94□□□□□ -0.34
HDAC7-226ENST00000547259 UROC1Q96N76 676 aa12.94□□□□□ -0.34
HDAC7-226ENST00000547259 NELL2Q99435 816 aa12.94□□□□□ -0.34
HDAC7-226ENST00000547259 BCO2Q9BYV7 579 aa12.94□□□□□ -0.34
HDAC7-226ENST00000547259 OSBPL6Q9BZF3 934 aa12.94□□□□□ -0.34
HDAC7-226ENST00000547259 GCNT4Q9P109 453 aa12.94□□□□□ -0.34
HDAC7-226ENST00000547259 SCN1AP35498 2009 aa12.94□□□□□ -0.34
HDAC7-226ENST00000547259 DCHS1Q96JQ0 3298 aa12.93□□□□□ -0.34
HDAC7-226ENST00000547259 LRRC10BA6NIK2 292 aa12.93□□□□□ -0.34
HDAC7-226ENST00000547259 PODXLO00592 558 aa12.93□□□□□ -0.34
HDAC7-226ENST00000547259 NCAM2O15394 837 aa12.93□□□□□ -0.34
HDAC7-226ENST00000547259 P4HA2O15460 535 aa12.93□□□□□ -0.34
HDAC7-226ENST00000547259 C8AP07357 584 aa12.93□□□□□ -0.34
HDAC7-226ENST00000547259 LRPAP1P30533 357 aa12.93□□□□□ -0.34
HDAC7-226ENST00000547259 RPL9P32969 192 aaKnown RBP12.93□□□□□ -0.34
HDAC7-226ENST00000547259 CLCNKBP51801 687 aa12.93□□□□□ -0.34
HDAC7-226ENST00000547259 RBP5P82980 135 aa12.93□□□□□ -0.34
HDAC7-226ENST00000547259 NCOA4Q13772 614 aa12.93□□□□□ -0.34
HDAC7-226ENST00000547259 RAB33AQ14088 237 aa12.93□□□□□ -0.34
HDAC7-226ENST00000547259 GSE1Q14687 1217 aa12.93□□□□□ -0.34
HDAC7-226ENST00000547259 RTP2Q5QGT7 225 aa12.93□□□□□ -0.34
HDAC7-226ENST00000547259 C9orf57Q5W0N0 161 aa12.93□□□□□ -0.34
HDAC7-226ENST00000547259 SARM1Q6SZW1 724 aa12.93□□□□□ -0.34
HDAC7-226ENST00000547259 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.93□□□□□ -0.34
HDAC7-226ENST00000547259 GBP6Q6ZN66 633 aa12.93□□□□□ -0.34
HDAC7-226ENST00000547259 GRASPQ7Z6J2 395 aaPredicted RBP12.93□□□□□ -0.34
HDAC7-226ENST00000547259 GPR161Q8N6U8 529 aaKnown RBP12.93□□□□□ -0.34
HDAC7-226ENST00000547259 CCDC150Q8NCX0 1101 aa12.93□□□□□ -0.34
HDAC7-226ENST00000547259 PJA1Q8NG27 643 aa12.93□□□□□ -0.34
HDAC7-226ENST00000547259 TAS1R2Q8TE23 839 aa12.93□□□□□ -0.34
HDAC7-226ENST00000547259 DDX27Q96GQ7 796 aaKnown RBP12.93□□□□□ -0.34
HDAC7-226ENST00000547259 PCMTD1Q96MG8 357 aaPredicted RBP12.93□□□□□ -0.34
HDAC7-226ENST00000547259 NAP1L5Q96NT1 182 aaPredicted RBP12.93□□□□□ -0.34
HDAC7-226ENST00000547259 IMPG2Q9BZV3 1241 aa12.93□□□□□ -0.34
HDAC7-226ENST00000547259 TRIM5Q9C035 493 aa12.93□□□□□ -0.34
HDAC7-226ENST00000547259 XPO4Q9C0E2 1151 aaKnown RBP12.93□□□□□ -0.34
HDAC7-226ENST00000547259 GRPEL1Q9HAV7 217 aa12.93□□□□□ -0.34
HDAC7-226ENST00000547259 RTN4Q9NQC3 1192 aaKnown RBP12.93□□□□□ -0.34
HDAC7-226ENST00000547259 CACNG4Q9UBN1 327 aa12.93□□□□□ -0.34
HDAC7-226ENST00000547259 SIX4Q9UIU6 781 aa12.93□□□□□ -0.34
HDAC7-226ENST00000547259 AGAP1Q9UPQ3 857 aa12.93□□□□□ -0.34
HDAC7-226ENST00000547259 NUMBLQ9Y6R0 609 aa12.93□□□□□ -0.34
HDAC7-226ENST00000547259 F5P12259 2224 aa12.92□□□□□ -0.34
HDAC7-226ENST00000547259 KANSL1LA0AUZ9 987 aa12.92□□□□□ -0.34
HDAC7-226ENST00000547259 GTPBP10A4D1E9 387 aaKnown RBP12.92□□□□□ -0.34
HDAC7-226ENST00000547259 TMEM189-UBE2V1I3L0A0 370 aa12.92□□□□□ -0.34
HDAC7-226ENST00000547259 PPEF2O14830 753 aa12.92□□□□□ -0.34
HDAC7-226ENST00000547259 PMM2O15305 246 aa12.92□□□□□ -0.34
HDAC7-226ENST00000547259 VNN1O95497 513 aa12.92□□□□□ -0.34
HDAC7-226ENST00000547259 RPL17P18621 184 aaKnown RBP12.92□□□□□ -0.34
HDAC7-226ENST00000547259 SDHBP21912 280 aa12.92□□□□□ -0.34
HDAC7-226ENST00000547259 PNPLA4P41247 253 aa12.92□□□□□ -0.34
HDAC7-226ENST00000547259 MYO1EQ12965 1108 aa12.92□□□□□ -0.34
HDAC7-226ENST00000547259 EXOC3L4Q17RC7 722 aa12.92□□□□□ -0.34
HDAC7-226ENST00000547259 ZNF699Q32M78 642 aa12.92□□□□□ -0.34
HDAC7-226ENST00000547259 ZNF528Q3MIS6 628 aa12.92□□□□□ -0.34
HDAC7-226ENST00000547259 ANKS3Q6ZW76 656 aa12.92□□□□□ -0.34
HDAC7-226ENST00000547259 LRRC52Q8N7C0 313 aa12.92□□□□□ -0.34
HDAC7-226ENST00000547259 LNX1Q8TBB1 728 aaPredicted RBP12.92□□□□□ -0.34
HDAC7-226ENST00000547259 FEZF2Q8TBJ5 459 aa12.92□□□□□ -0.34
HDAC7-226ENST00000547259 RUBCNQ92622 972 aa12.92□□□□□ -0.34
HDAC7-226ENST00000547259 RABGGTAQ92696 567 aa12.92□□□□□ -0.34
HDAC7-226ENST00000547259 B3GALT6Q96L58 329 aa12.92□□□□□ -0.34
HDAC7-226ENST00000547259 HINFPQ9BQA5 517 aa12.92□□□□□ -0.34
HDAC7-226ENST00000547259 CLSTN3Q9BQT9 956 aa12.92□□□□□ -0.34
HDAC7-226ENST00000547259 PAAF1Q9BRP4 392 aa12.92□□□□□ -0.34
HDAC7-226ENST00000547259 CRACR2AQ9BSW2 395 aa12.92□□□□□ -0.34
HDAC7-226ENST00000547259 INTS2Q9H0H0 1204 aaKnown RBP12.92□□□□□ -0.34
HDAC7-226ENST00000547259 RAB20Q9NX57 234 aa12.92□□□□□ -0.34
HDAC7-226ENST00000547259 FBXO4Q9UKT5 387 aa12.92□□□□□ -0.34
HDAC7-226ENST00000547259 POLIQ9UNA4 740 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms