RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 EZH1Q92800 747 aaPredicted RBP13.82□□□□□ -0.2
SCAF11-208ENST00000546534 P2RY13Q9BPV8 354 aa13.82□□□□□ -0.2
SCAF11-208ENST00000546534 C17orf75Q9HAS0 396 aa13.82□□□□□ -0.2
SCAF11-208ENST00000546534 TMEM9BQ9NQ34 198 aa13.82□□□□□ -0.2
SCAF11-208ENST00000546534 TDP1Q9NUW8 608 aa13.82□□□□□ -0.2
SCAF11-208ENST00000546534 SPEGQ15772 3267 aa13.82□□□□□ -0.2
SCAF11-208ENST00000546534 PKD1L2Q7Z442 2459 aa13.82□□□□□ -0.2
SCAF11-208ENST00000546534 NUDT7P0C024 238 aa13.81□□□□□ -0.2
SCAF11-208ENST00000546534 MAPTP10636 758 aaKnown RBP13.81□□□□□ -0.2
SCAF11-208ENST00000546534 NMT1P30419 496 aaKnown RBP13.81□□□□□ -0.2
SCAF11-208ENST00000546534 MATR3P43243 847 aaKnown RBP eCLIP13.81□□□□□ -0.2
SCAF11-208ENST00000546534 DGKEP52429 567 aa13.81□□□□□ -0.2
SCAF11-208ENST00000546534 PPP2R3AQ06190 1150 aa13.81□□□□□ -0.2
SCAF11-208ENST00000546534 PDIA5Q14554 519 aa13.81□□□□□ -0.2
SCAF11-208ENST00000546534 SAFBQ15424 915 aaKnown RBP eCLIP13.81□□□□□ -0.2
SCAF11-208ENST00000546534 TTC38Q5R3I4 469 aa13.81□□□□□ -0.2
SCAF11-208ENST00000546534 PMS2CLQ68D20 193 aa13.81□□□□□ -0.2
SCAF11-208ENST00000546534 CC2D1AQ6P1N0 951 aaPredicted RBP13.81□□□□□ -0.2
SCAF11-208ENST00000546534 SPIRE2Q8WWL2 714 aa13.81□□□□□ -0.2
SCAF11-208ENST00000546534 ZCWPW1Q9H0M4 648 aa13.81□□□□□ -0.2
SCAF11-208ENST00000546534 ZMYM5Q9UJ78 669 aa13.81□□□□□ -0.2
SCAF11-208ENST00000546534 TBX20Q9UMR3 447 aa13.81□□□□□ -0.2
SCAF11-208ENST00000546534 LHX6Q9UPM6 363 aa13.81□□□□□ -0.2
SCAF11-208ENST00000546534 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.81□□□□□ -0.2
SCAF11-208ENST00000546534 ATG2BQ96BY7 2078 aa13.81□□□□□ -0.2
SCAF11-208ENST00000546534 PP2D1A8MPX8 630 aa13.8□□□□□ -0.2
SCAF11-208ENST00000546534 F11P03951 625 aa13.8□□□□□ -0.2
SCAF11-208ENST00000546534 HMGA1P17096 107 aaKnown RBP13.8□□□□□ -0.2
SCAF11-208ENST00000546534 GJA4P35212 333 aa13.8□□□□□ -0.2
SCAF11-208ENST00000546534 NLRP12P59046 1061 aa13.8□□□□□ -0.2
SCAF11-208ENST00000546534 IRX4P78413 519 aa13.8□□□□□ -0.2
SCAF11-208ENST00000546534 RAD51AP2Q09MP3 1159 aa13.8□□□□□ -0.2
SCAF11-208ENST00000546534 ENOX2Q16206 610 aaKnown RBP13.8□□□□□ -0.2
SCAF11-208ENST00000546534 UAP1L1Q3KQV9 507 aa13.8□□□□□ -0.2
SCAF11-208ENST00000546534 SPATA1Q5VX52 437 aa13.8□□□□□ -0.2
SCAF11-208ENST00000546534 TXNDC8Q6A555 127 aa13.8□□□□□ -0.2
SCAF11-208ENST00000546534 KIAA1211LQ6NV74 962 aa13.8□□□□□ -0.2
SCAF11-208ENST00000546534 KCNK18Q7Z418 384 aa13.8□□□□□ -0.2
SCAF11-208ENST00000546534 LRRTM3Q86VH5 581 aa13.8□□□□□ -0.2
SCAF11-208ENST00000546534 IGSF22Q8N9C0 903 aa13.8□□□□□ -0.2
SCAF11-208ENST00000546534 DEFB124Q8NES8 71 aa13.8□□□□□ -0.2
SCAF11-208ENST00000546534 ACDQ96AP0 544 aa13.8□□□□□ -0.2
SCAF11-208ENST00000546534 TPSD1Q9BZJ3 242 aa13.8□□□□□ -0.2
SCAF11-208ENST00000546534 KIF9Q9HAQ2 790 aa13.8□□□□□ -0.2
SCAF11-208ENST00000546534 ASPMQ8IZT6 3477 aa13.8□□□□□ -0.2
SCAF11-208ENST00000546534 SOBPA7XYQ1 873 aa13.79□□□□□ -0.2
SCAF11-208ENST00000546534 XPOTO43592 962 aaKnown RBP13.79□□□□□ -0.2
SCAF11-208ENST00000546534 HYAL3O43820 417 aaPredicted RBP13.79□□□□□ -0.2
SCAF11-208ENST00000546534 CYP11A1P05108 521 aa13.79□□□□□ -0.2
SCAF11-208ENST00000546534 HAPLN1P10915 354 aaPredicted RBP13.79□□□□□ -0.2
SCAF11-208ENST00000546534 PLS3P13797 630 aa13.79□□□□□ -0.2
SCAF11-208ENST00000546534 GUCY2CP25092 1073 aa13.79□□□□□ -0.2
SCAF11-208ENST00000546534 CDC25AP30304 524 aa13.79□□□□□ -0.2
SCAF11-208ENST00000546534 SMTNP53814 917 aa13.79□□□□□ -0.2
SCAF11-208ENST00000546534 PSMD2Q13200 908 aa13.79□□□□□ -0.2
SCAF11-208ENST00000546534 PDGFRLQ15198 375 aa13.79□□□□□ -0.2
SCAF11-208ENST00000546534 USP39Q53GS9 565 aaKnown RBP13.79□□□□□ -0.2
SCAF11-208ENST00000546534 CYP2U1Q7Z449 544 aa13.79□□□□□ -0.2
SCAF11-208ENST00000546534 TSTD1Q8NFU3 115 aa13.79□□□□□ -0.2
SCAF11-208ENST00000546534 CD101Q93033 1021 aa13.79□□□□□ -0.2
SCAF11-208ENST00000546534 ECT2Q9H8V3 914 aa13.79□□□□□ -0.2
SCAF11-208ENST00000546534 ANKRD11Q6UB99 2663 aaPredicted RBP13.79□□□□□ -0.2
SCAF11-208ENST00000546534 FAM189A1O60320 539 aa13.78□□□□□ -0.2
SCAF11-208ENST00000546534 ADRB2P07550 413 aa13.78□□□□□ -0.2
SCAF11-208ENST00000546534 BCKDHBP21953 392 aa13.78□□□□□ -0.2
SCAF11-208ENST00000546534 DDX6P26196 483 aaKnown RBP eCLIP13.78□□□□□ -0.2
SCAF11-208ENST00000546534 ST3GAL1Q11201 340 aa13.78□□□□□ -0.2
SCAF11-208ENST00000546534 C9orf57Q5W0N0 161 aa13.78□□□□□ -0.2
SCAF11-208ENST00000546534 KRT79Q5XKE5 535 aa13.78□□□□□ -0.2
SCAF11-208ENST00000546534 JADE1Q6IE81 842 aa13.78□□□□□ -0.2
SCAF11-208ENST00000546534 C11orf74Q86VG3 221 aa13.78□□□□□ -0.2
SCAF11-208ENST00000546534 MON1AQ86VX9 555 aa13.78□□□□□ -0.2
SCAF11-208ENST00000546534 CPA6Q8N4T0 437 aa13.78□□□□□ -0.2
SCAF11-208ENST00000546534 STKLD1Q8NE28 680 aa13.78□□□□□ -0.2
SCAF11-208ENST00000546534 SPPL2BQ8TCT7 592 aa13.78□□□□□ -0.2
SCAF11-208ENST00000546534 EXOC4Q96A65 974 aa13.78□□□□□ -0.2
SCAF11-208ENST00000546534 TSPAN18Q96SJ8 248 aa13.78□□□□□ -0.2
SCAF11-208ENST00000546534 TIPINQ9BVW5 301 aa13.78□□□□□ -0.2
SCAF11-208ENST00000546534 FOXP1Q9H334 677 aaPredicted RBP13.78□□□□□ -0.2
SCAF11-208ENST00000546534 RPF1Q9H9Y2 349 aaKnown RBP13.78□□□□□ -0.2
SCAF11-208ENST00000546534 ABI2Q9NYB9 513 aaPredicted RBP13.78□□□□□ -0.2
SCAF11-208ENST00000546534 NEUROG3Q9Y4Z2 214 aa13.78□□□□□ -0.2
SCAF11-208ENST00000546534 ANO9A1A5B4 782 aa13.77□□□□□ -0.21
SCAF11-208ENST00000546534 PIRO00625 290 aa13.77□□□□□ -0.21
SCAF11-208ENST00000546534 OGTO15294 1046 aa13.77□□□□□ -0.21
SCAF11-208ENST00000546534 PAX3P23760 479 aa13.77□□□□□ -0.21
SCAF11-208ENST00000546534 DHPSP49366 369 aaPredicted RBP13.77□□□□□ -0.21
SCAF11-208ENST00000546534 GPR15P49685 360 aa13.77□□□□□ -0.21
SCAF11-208ENST00000546534 AKAP13Q12802 2813 aa13.77□□□□□ -0.21
SCAF11-208ENST00000546534 ZNF268Q14587 947 aaPredicted RBP13.77□□□□□ -0.21
SCAF11-208ENST00000546534 MTF1Q14872 753 aa13.77□□□□□ -0.21
SCAF11-208ENST00000546534 KYAT1Q16773 422 aa13.77□□□□□ -0.21
SCAF11-208ENST00000546534 TTC16Q8NEE8 873 aa13.77□□□□□ -0.21
SCAF11-208ENST00000546534 C2orf15Q8WU43 125 aaKnown RBP13.77□□□□□ -0.21
SCAF11-208ENST00000546534 PIGKQ92643 395 aa13.77□□□□□ -0.21
SCAF11-208ENST00000546534 MRPS31Q92665 395 aaKnown RBP13.77□□□□□ -0.21
SCAF11-208ENST00000546534 BICD1Q96G01 975 aa13.77□□□□□ -0.21
SCAF11-208ENST00000546534 C8orf76Q96K31 380 aa13.77□□□□□ -0.21
SCAF11-208ENST00000546534 MMTAG2Q9BU76 263 aaKnown RBP13.77□□□□□ -0.21
SCAF11-208ENST00000546534 RAB34Q9BZG1 259 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms