RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 ARHGEF37A1IGU5 675 aa20.59■□□□□ 0.89
SKP2-208ENST00000546211 LHX1P48742 406 aa20.59■□□□□ 0.89
SKP2-208ENST00000546211 TCTN1Q2MV58 587 aa20.59■□□□□ 0.89
SKP2-208ENST00000546211 TIGD5Q53EQ6 642 aa20.59■□□□□ 0.89
SKP2-208ENST00000546211 ARHGAP17Q68EM7 881 aa20.59■□□□□ 0.89
SKP2-208ENST00000546211 PHLDB2Q86SQ0 1253 aa20.59■□□□□ 0.89
SKP2-208ENST00000546211 OSTM1Q86WC4 334 aa20.59■□□□□ 0.89
SKP2-208ENST00000546211 CEP112Q8N8E3 955 aa20.59■□□□□ 0.89
SKP2-208ENST00000546211 OSBPL9Q96SU4 736 aa20.59■□□□□ 0.89
SKP2-208ENST00000546211 CARD6Q9BX69 1037 aa20.59■□□□□ 0.89
SKP2-208ENST00000546211 ABCB6Q9NP58 842 aa20.59■□□□□ 0.89
SKP2-208ENST00000546211 GABRDO14764 452 aa20.59■□□□□ 0.89
SKP2-208ENST00000546211 HCRTO43612 131 aa20.59■□□□□ 0.89
SKP2-208ENST00000546211 GPD2P43304 727 aa20.59■□□□□ 0.89
SKP2-208ENST00000546211 DSC1Q08554 894 aa20.59■□□□□ 0.89
SKP2-208ENST00000546211 MESDQ14696 234 aa20.59■□□□□ 0.89
SKP2-208ENST00000546211 PLEKHA7Q6IQ23 1121 aa20.59■□□□□ 0.89
SKP2-208ENST00000546211 CNKSR3Q6P9H4 555 aa20.59■□□□□ 0.89
SKP2-208ENST00000546211 NT5DC3Q86UY8 548 aa20.59■□□□□ 0.89
SKP2-208ENST00000546211 METTL23Q86XA0 190 aa20.59■□□□□ 0.89
SKP2-208ENST00000546211 ZNF280BQ86YH2 543 aa20.59■□□□□ 0.89
SKP2-208ENST00000546211 UBA3Q8TBC4 463 aa20.59■□□□□ 0.89
SKP2-208ENST00000546211 SYNCQ9H7C4 482 aa20.59■□□□□ 0.89
SKP2-208ENST00000546211 DDX43Q9NXZ2 648 aaKnown RBP20.59■□□□□ 0.89
SKP2-208ENST00000546211 ANAPC7Q9UJX3 599 aa20.59■□□□□ 0.89
SKP2-208ENST00000546211 PACSIN2Q9UNF0 486 aaPredicted RBP20.59■□□□□ 0.89
SKP2-208ENST00000546211 UQCRHLA0A096LP55 91 aa20.58■□□□□ 0.88
SKP2-208ENST00000546211 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.58■□□□□ 0.88
SKP2-208ENST00000546211 TMEM110-MUSTN1A8MSY1 372 aa20.58■□□□□ 0.88
SKP2-208ENST00000546211 SRGAP2O75044 1071 aa20.58■□□□□ 0.88
SKP2-208ENST00000546211 DDHD2O94830 711 aa20.58■□□□□ 0.88
SKP2-208ENST00000546211 KIF4AO95239 1232 aa20.58■□□□□ 0.88
SKP2-208ENST00000546211 UQCRHP07919 91 aa20.58■□□□□ 0.88
SKP2-208ENST00000546211 IKBKEQ14164 716 aa20.58■□□□□ 0.88
SKP2-208ENST00000546211 PTPN20Q4JDL3 420 aa20.58■□□□□ 0.88
SKP2-208ENST00000546211 PAN2Q504Q3 1202 aaKnown RBP20.58■□□□□ 0.88
SKP2-208ENST00000546211 DNAJC24Q6P3W2 148 aa20.58■□□□□ 0.88
SKP2-208ENST00000546211 NPAS4Q8IUM7 802 aa20.58■□□□□ 0.88
SKP2-208ENST00000546211 B3GALNT2Q8NCR0 500 aa20.58■□□□□ 0.88
SKP2-208ENST00000546211 SPATA18Q8TC71 538 aa20.58■□□□□ 0.88
SKP2-208ENST00000546211 IPO4Q8TEX9 1081 aaKnown RBP20.58■□□□□ 0.88
SKP2-208ENST00000546211 UBE2Q2Q8WVN8 375 aa20.58■□□□□ 0.88
SKP2-208ENST00000546211 RSPH1Q8WYR4 309 aa20.58■□□□□ 0.88
SKP2-208ENST00000546211 CYTH4Q9UIA0 394 aa20.58■□□□□ 0.88
SKP2-208ENST00000546211 DSEQ9UL01 958 aa20.58■□□□□ 0.88
SKP2-208ENST00000546211 MYH10P35580 1976 aa20.57■□□□□ 0.88
SKP2-208ENST00000546211 SCN5AQ14524 2016 aa20.57■□□□□ 0.88
SKP2-208ENST00000546211 SETSIPP0DME0 302 aa20.57■□□□□ 0.88
SKP2-208ENST00000546211 BRCC3P46736 316 aa20.57■□□□□ 0.88
SKP2-208ENST00000546211 DNA2P51530 1060 aa20.57■□□□□ 0.88
SKP2-208ENST00000546211 CKAP4Q07065 602 aaKnown RBP20.57■□□□□ 0.88
SKP2-208ENST00000546211 PDCLQ13371 301 aa20.57■□□□□ 0.88
SKP2-208ENST00000546211 MAMLD1Q13495 774 aa20.57■□□□□ 0.88
SKP2-208ENST00000546211 PTPROQ16827 1216 aa20.57■□□□□ 0.88
SKP2-208ENST00000546211 LLGL2Q6P1M3 1020 aa20.57■□□□□ 0.88
SKP2-208ENST00000546211 COLGALT2Q8IYK4 626 aa20.57■□□□□ 0.88
SKP2-208ENST00000546211 HASPINQ8TF76 798 aa20.57■□□□□ 0.88
SKP2-208ENST00000546211 C18orf8Q96DM3 657 aa20.57■□□□□ 0.88
SKP2-208ENST00000546211 PSMB7Q99436 277 aa20.57■□□□□ 0.88
SKP2-208ENST00000546211 MIS12Q9H081 205 aa20.57■□□□□ 0.88
SKP2-208ENST00000546211 PRDM5Q9NQX1 630 aaPredicted RBP20.57■□□□□ 0.88
SKP2-208ENST00000546211 WDR35Q9P2L0 1181 aa20.57■□□□□ 0.88
SKP2-208ENST00000546211 ALG6Q9Y672 507 aa20.57■□□□□ 0.88
SKP2-208ENST00000546211 M0QZQ0 153 aa20.56■□□□□ 0.88
SKP2-208ENST00000546211 MYO1FO00160 1098 aa20.56■□□□□ 0.88
SKP2-208ENST00000546211 PTPN1P18031 435 aaKnown RBP20.56■□□□□ 0.88
SKP2-208ENST00000546211 GTF2F1P35269 517 aaKnown RBP eCLIP20.56■□□□□ 0.88
SKP2-208ENST00000546211 OR1G1P47890 313 aa20.56■□□□□ 0.88
SKP2-208ENST00000546211 TAP1Q03518 808 aa20.56■□□□□ 0.88
SKP2-208ENST00000546211 CYP4A22Q5TCH4 519 aa20.56■□□□□ 0.88
SKP2-208ENST00000546211 CD300LGQ6UXG3 332 aa20.56■□□□□ 0.88
SKP2-208ENST00000546211 C3orf20Q8ND61 904 aa20.56■□□□□ 0.88
SKP2-208ENST00000546211 FEZF2Q8TBJ5 459 aa20.56■□□□□ 0.88
SKP2-208ENST00000546211 HES6Q96HZ4 224 aa20.56■□□□□ 0.88
SKP2-208ENST00000546211 BTBD6Q96KE9 485 aa20.56■□□□□ 0.88
SKP2-208ENST00000546211 CAPZA3Q96KX2 299 aa20.56■□□□□ 0.88
SKP2-208ENST00000546211 CASD1Q96PB1 797 aa20.56■□□□□ 0.88
SKP2-208ENST00000546211 CPXM1Q96SM3 734 aa20.56■□□□□ 0.88
SKP2-208ENST00000546211 MRPL9Q9BYD2 267 aaKnown RBP20.56■□□□□ 0.88
SKP2-208ENST00000546211 TIMM13Q9Y5L4 95 aaPredicted RBP20.56■□□□□ 0.88
SKP2-208ENST00000546211 TMEM189-UBE2V1I3L0A0 370 aa20.55■□□□□ 0.88
SKP2-208ENST00000546211 I3L4J1 428 aa20.55■□□□□ 0.88
SKP2-208ENST00000546211 TIMP1P01033 207 aa20.55■□□□□ 0.88
SKP2-208ENST00000546211 CYP11A1P05108 521 aa20.55■□□□□ 0.88
SKP2-208ENST00000546211 CCDC130P13994 396 aa20.55■□□□□ 0.88
SKP2-208ENST00000546211 ACAT1P24752 427 aaKnown RBP20.55■□□□□ 0.88
SKP2-208ENST00000546211 PCSK1P29120 753 aa20.55■□□□□ 0.88
SKP2-208ENST00000546211 ADORA2BP29275 332 aa20.55■□□□□ 0.88
SKP2-208ENST00000546211 CXCR5P32302 372 aa20.55■□□□□ 0.88
SKP2-208ENST00000546211 PSMC1P62191 440 aaKnown RBP20.55■□□□□ 0.88
SKP2-208ENST00000546211 TTC30AQ86WT1 665 aa20.55■□□□□ 0.88
SKP2-208ENST00000546211 ANKRD52Q8NB46 1076 aa20.55■□□□□ 0.88
SKP2-208ENST00000546211 SUSD3Q96L08 255 aa20.55■□□□□ 0.88
SKP2-208ENST00000546211 LPIN3Q9BQK8 851 aa20.55■□□□□ 0.88
SKP2-208ENST00000546211 ST7Q9NRC1 585 aa20.55■□□□□ 0.88
SKP2-208ENST00000546211 LCMT1Q9UIC8 334 aa20.55■□□□□ 0.88
SKP2-208ENST00000546211 MIF4GDA9UHW6 222 aaKnown RBP20.55■□□□□ 0.88
SKP2-208ENST00000546211 KCNK3O14649 394 aa20.55■□□□□ 0.88
SKP2-208ENST00000546211 ZNF185O15231 689 aa20.55■□□□□ 0.88
SKP2-208ENST00000546211 SPOPO43791 374 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms