RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 MOSPD3O75425 235 aa12.7□□□□□ -0.38
YBX3-217ENST00000546164 ASS1P00966 412 aaKnown RBP12.7□□□□□ -0.38
YBX3-217ENST00000546164 EPB41P11171 864 aaKnown RBP12.7□□□□□ -0.38
YBX3-217ENST00000546164 CEBPBP17676 345 aa12.7□□□□□ -0.38
YBX3-217ENST00000546164 BMP6P22004 513 aa12.7□□□□□ -0.38
YBX3-217ENST00000546164 ACAT1P24752 427 aaKnown RBP12.7□□□□□ -0.38
YBX3-217ENST00000546164 CCNE1P24864 410 aa12.7□□□□□ -0.38
YBX3-217ENST00000546164 LMO2P25791 158 aa12.7□□□□□ -0.38
YBX3-217ENST00000546164 PPP3CAQ08209 521 aa12.7□□□□□ -0.38
YBX3-217ENST00000546164 VEPH1Q14D04 833 aa12.7□□□□□ -0.38
YBX3-217ENST00000546164 MAPRE1Q15691 268 aaKnown RBP12.7□□□□□ -0.38
YBX3-217ENST00000546164 SGSM1Q2NKQ1 1148 aa12.7□□□□□ -0.38
YBX3-217ENST00000546164 MGAT5BQ3V5L5 792 aa12.7□□□□□ -0.38
YBX3-217ENST00000546164 ZNF667Q5HYK9 610 aa12.7□□□□□ -0.38
YBX3-217ENST00000546164 ANKRD40Q6AI12 368 aa12.7□□□□□ -0.38
YBX3-217ENST00000546164 MTSS1LQ765P7 747 aa12.7□□□□□ -0.38
YBX3-217ENST00000546164 DNAJB7Q7Z6W7 309 aaPredicted RBP12.7□□□□□ -0.38
YBX3-217ENST00000546164 HS6ST3Q8IZP7 471 aa12.7□□□□□ -0.38
YBX3-217ENST00000546164 SLC44A3Q8N4M1 653 aa12.7□□□□□ -0.38
YBX3-217ENST00000546164 TRIML1Q8N9V2 468 aa12.7□□□□□ -0.38
YBX3-217ENST00000546164 TCEAL4Q96EI5 215 aa12.7□□□□□ -0.38
YBX3-217ENST00000546164 SEPT5Q99719 369 aaPredicted RBP12.7□□□□□ -0.38
YBX3-217ENST00000546164 SYT15Q9BQS2 421 aa12.7□□□□□ -0.38
YBX3-217ENST00000546164 ABI2Q9NYB9 513 aaPredicted RBP12.7□□□□□ -0.38
YBX3-217ENST00000546164 GTF3C4Q9UKN8 822 aa12.7□□□□□ -0.38
YBX3-217ENST00000546164 NME7Q9Y5B8 376 aa12.7□□□□□ -0.38
YBX3-217ENST00000546164 NUMBLQ9Y6R0 609 aa12.7□□□□□ -0.38
YBX3-217ENST00000546164 PPP1R3GB7ZBB8 358 aa12.69□□□□□ -0.38
YBX3-217ENST00000546164 NRG2O14511 850 aaPredicted RBP12.69□□□□□ -0.38
YBX3-217ENST00000546164 HCRTO43612 131 aa12.69□□□□□ -0.38
YBX3-217ENST00000546164 SOAT2O75908 522 aa12.69□□□□□ -0.38
YBX3-217ENST00000546164 FGF19O95750 216 aa12.69□□□□□ -0.38
YBX3-217ENST00000546164 TRIM49P0CI25 452 aa12.69□□□□□ -0.38
YBX3-217ENST00000546164 TRIM49CP0CI26 452 aa12.69□□□□□ -0.38
YBX3-217ENST00000546164 P4HA1P13674 534 aa12.69□□□□□ -0.38
YBX3-217ENST00000546164 GNL1P36915 607 aaPredicted RBP12.69□□□□□ -0.38
YBX3-217ENST00000546164 MAGEA11P43364 429 aa12.69□□□□□ -0.38
YBX3-217ENST00000546164 GCLMP48507 274 aa12.69□□□□□ -0.38
YBX3-217ENST00000546164 RPL10AP62906 217 aaKnown RBP12.69□□□□□ -0.38
YBX3-217ENST00000546164 PARM1Q6UWI2 310 aa12.69□□□□□ -0.38
YBX3-217ENST00000546164 C4orf50Q6ZRC1 276 aa12.69□□□□□ -0.38
YBX3-217ENST00000546164 HFE2Q6ZVN8 426 aa12.69□□□□□ -0.38
YBX3-217ENST00000546164 MYCBPAPQ8TBZ2 947 aa12.69□□□□□ -0.38
YBX3-217ENST00000546164 RSAD2Q8WXG1 361 aa12.69□□□□□ -0.38
YBX3-217ENST00000546164 ING5Q8WYH8 240 aa12.69□□□□□ -0.38
YBX3-217ENST00000546164 FGF14Q92915 247 aa12.69□□□□□ -0.38
YBX3-217ENST00000546164 GPR88Q9GZN0 384 aa12.69□□□□□ -0.38
YBX3-217ENST00000546164 SNX25Q9H3E2 840 aa12.69□□□□□ -0.38
YBX3-217ENST00000546164 SMOC2Q9H3U7 446 aa12.69□□□□□ -0.38
YBX3-217ENST00000546164 TMEM8AQ9HCN3 771 aa12.69□□□□□ -0.38
YBX3-217ENST00000546164 CRTAC1Q9NQ79 661 aa12.69□□□□□ -0.38
YBX3-217ENST00000546164 KIAA1468Q9P260 1216 aa12.69□□□□□ -0.38
YBX3-217ENST00000546164 NXF1Q9UBU9 619 aaKnown RBP12.69□□□□□ -0.38
YBX3-217ENST00000546164 TRIM49BA6NDI0 452 aa12.68□□□□□ -0.38
YBX3-217ENST00000546164 STX10O60499 249 aa12.68□□□□□ -0.38
YBX3-217ENST00000546164 ATP2C2O75185 946 aa12.68□□□□□ -0.38
YBX3-217ENST00000546164 ECI2O75521 394 aa12.68□□□□□ -0.38
YBX3-217ENST00000546164 HLA-DRAP01903 254 aa12.68□□□□□ -0.38
YBX3-217ENST00000546164 SRFP11831 508 aa12.68□□□□□ -0.38
YBX3-217ENST00000546164 MYL4P12829 197 aa12.68□□□□□ -0.38
YBX3-217ENST00000546164 PIK3CAP42336 1068 aa12.68□□□□□ -0.38
YBX3-217ENST00000546164 PSMC1P62191 440 aaKnown RBP12.68□□□□□ -0.38
YBX3-217ENST00000546164 CCDC142Q17RM4 750 aa12.68□□□□□ -0.38
YBX3-217ENST00000546164 KRT39Q6A163 491 aa12.68□□□□□ -0.38
YBX3-217ENST00000546164 ISM2Q6H9L7 571 aa12.68□□□□□ -0.38
YBX3-217ENST00000546164 TTI2Q6NXR4 508 aa12.68□□□□□ -0.38
YBX3-217ENST00000546164 VSTM1Q6UX27 236 aa12.68□□□□□ -0.38
YBX3-217ENST00000546164 GAREM2Q75VX8 874 aa12.68□□□□□ -0.38
YBX3-217ENST00000546164 SPATA2LQ8IUW3 424 aaPredicted RBP12.68□□□□□ -0.38
YBX3-217ENST00000546164 OR6B3Q8NGW1 331 aa12.68□□□□□ -0.38
YBX3-217ENST00000546164 SHKBP1Q8TBC3 707 aa12.68□□□□□ -0.38
YBX3-217ENST00000546164 TAS1R2Q8TE23 839 aa12.68□□□□□ -0.38
YBX3-217ENST00000546164 MYLPFQ96A32 169 aa12.68□□□□□ -0.38
YBX3-217ENST00000546164 MCRS1Q96EZ8 462 aa12.68□□□□□ -0.38
YBX3-217ENST00000546164 EEF2KMTQ96G04 330 aa12.68□□□□□ -0.38
YBX3-217ENST00000546164 FAXDC2Q96IV6 333 aa12.68□□□□□ -0.38
YBX3-217ENST00000546164 CEP295NLQ96MC4 621 aa12.68□□□□□ -0.38
YBX3-217ENST00000546164 CEP63Q96MT8 703 aa12.68□□□□□ -0.38
YBX3-217ENST00000546164 IPO9Q96P70 1041 aaKnown RBP12.68□□□□□ -0.38
YBX3-217ENST00000546164 LPIN3Q9BQK8 851 aa12.68□□□□□ -0.38
YBX3-217ENST00000546164 PI4K2AQ9BTU6 479 aa12.68□□□□□ -0.38
YBX3-217ENST00000546164 SMYD3Q9H7B4 428 aa12.68□□□□□ -0.38
YBX3-217ENST00000546164 TRPV4Q9HBA0 871 aa12.68□□□□□ -0.38
YBX3-217ENST00000546164 IL21Q9HBE4 155 aa12.68□□□□□ -0.38
YBX3-217ENST00000546164 ZNF334Q9HCZ1 680 aaPredicted RBP12.68□□□□□ -0.38
YBX3-217ENST00000546164 SLC2A4RGQ9NR83 387 aa12.68□□□□□ -0.38
YBX3-217ENST00000546164 ZNF318Q5VUA4 2279 aa12.68□□□□□ -0.38
YBX3-217ENST00000546164 MUC6Q6W4X9 2439 aa12.68□□□□□ -0.38
YBX3-217ENST00000546164 BICDL2A1A5D9 508 aa12.67□□□□□ -0.38
YBX3-217ENST00000546164 A8MXQ7 604 aa12.67□□□□□ -0.38
YBX3-217ENST00000546164 NOL4O94818 638 aa12.67□□□□□ -0.38
YBX3-217ENST00000546164 PDGFRBP09619 1106 aa12.67□□□□□ -0.38
YBX3-217ENST00000546164 CSH1P0DML2 217 aa12.67□□□□□ -0.38
YBX3-217ENST00000546164 CSH2P0DML3 217 aa12.67□□□□□ -0.38
YBX3-217ENST00000546164 HMGA1P17096 107 aaKnown RBP12.67□□□□□ -0.38
YBX3-217ENST00000546164 FCARP24071 287 aa12.67□□□□□ -0.38
YBX3-217ENST00000546164 CYP2F1P24903 491 aa12.67□□□□□ -0.38
YBX3-217ENST00000546164 ASPAP45381 313 aa12.67□□□□□ -0.38
YBX3-217ENST00000546164 MXI1P50539 228 aa12.67□□□□□ -0.38
YBX3-217ENST00000546164 FILIP1Q7Z7B0 1213 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms