RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 DNAAF3Q8N9W5 541 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 FEZF2Q8TBJ5 459 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 TRPM4Q8TD43 1214 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 STMN2Q93045 179 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 SENP7Q9BQF6 1050 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 ADAM7Q9H2U9 754 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 EPB41L4BQ9H329 900 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 PARVAQ9NVD7 372 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 PPARGC1AQ9UBK2 798 aaKnown RBP10.29□□□□□ -0.76
TRAF1-203ENST00000546084 CEP350Q5VT06 3117 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 MAFGO15525 162 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 CBX6O95503 412 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 OATP04181 439 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 RARBP10826 455 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 CHRNB2P17787 502 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 TMPRSS15P98073 1019 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 GAD2Q05329 585 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 TFDP1Q14186 410 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 TAF5Q15542 800 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 CFAP157Q5JU67 520 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 ZNF772Q68DY9 489 aaPredicted RBP10.28□□□□□ -0.76
TRAF1-203ENST00000546084 NXNQ6DKJ4 435 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 FITM2Q8N6M3 262 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 MAIP1Q8WWC4 291 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 CLMNQ96JQ2 1002 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 SLC38A10Q9HBR0 1119 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 RNF181Q9P0P0 153 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 UVRAGQ9P2Y5 699 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 SLC12A4Q9UP95 1085 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 GON4LQ3T8J9 2241 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 DOT1LQ8TEK3 1739 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 TOGARAM1Q9Y4F4 1720 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 ZMYM2Q9UBW7 1377 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 RFC1P35251 1148 aaPredicted RBP10.28□□□□□ -0.76
TRAF1-203ENST00000546084 CTCFP49711 727 aaPredicted RBP10.28□□□□□ -0.76
TRAF1-203ENST00000546084 EPHB1P54762 984 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 CLEC16AQ2KHT3 1053 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 HSDL1Q3SXM5 330 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 BTNL9Q6UXG8 535 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 TRMT10CQ7L0Y3 403 aaKnown RBP10.28□□□□□ -0.76
TRAF1-203ENST00000546084 SEC14L1Q92503 715 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 LRRC37BQ96QE4 947 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 RAB3IPQ96QF0 476 aaPredicted RBP10.28□□□□□ -0.76
TRAF1-203ENST00000546084 LPIN3Q9BQK8 851 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 TRAIPQ9BWF2 469 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 MRPL4Q9BYD3 311 aaKnown RBP10.28□□□□□ -0.76
TRAF1-203ENST00000546084 IL1RAPL1Q9NZN1 696 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 NCANO14594 1321 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 A0A087WZ62 844 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 EXTL3O43909 919 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 CTSHP09668 335 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 TROVE2P10155 538 aaKnown RBP eCLIP10.28□□□□□ -0.76
TRAF1-203ENST00000546084 PTGIRP43119 386 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 RAD23BP54727 409 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 WNT7BP56706 349 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 EEF1DP3Q658K8 133 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 SCUBE3Q8IX30 993 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 CYP4X1Q8N118 509 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 ADAM32Q8TC27 787 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 LPAR1Q92633 364 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 CDHR1Q96JP9 859 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 RMDN2Q96LZ7 410 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 FDXACB1Q9BRP7 624 aaPredicted RBP10.28□□□□□ -0.76
TRAF1-203ENST00000546084 SIK2Q9H0K1 926 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 PDGFCQ9NRA1 345 aa10.28□□□□□ -0.76
TRAF1-203ENST00000546084 XPO7Q9UIA9 1087 aaKnown RBP10.28□□□□□ -0.76
TRAF1-203ENST00000546084 MYH1P12882 1939 aa10.27□□□□□ -0.76
TRAF1-203ENST00000546084 MYH4Q9Y623 1939 aa10.27□□□□□ -0.76
TRAF1-203ENST00000546084 A0A1W2PPM1 405 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 A6NJR5 290 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 DRG2P55039 364 aaKnown RBP10.27□□□□□ -0.77
TRAF1-203ENST00000546084 BCAR1P56945 870 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 MUM1Q2TAK8 710 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 TMEM63BQ5T3F8 832 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 BZW1Q7L1Q6 419 aaKnown RBP10.27□□□□□ -0.77
TRAF1-203ENST00000546084 C4orf19Q8IY42 314 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 PDCD7Q8N8D1 485 aaKnown RBP10.27□□□□□ -0.77
TRAF1-203ENST00000546084 MAGEC3Q8TD91 643 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 FAM111AQ96PZ2 611 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 ROPN1BQ9BZX4 212 aaPredicted RBP10.27□□□□□ -0.77
TRAF1-203ENST00000546084 ROPN1Q9HAT0 212 aaPredicted RBP10.27□□□□□ -0.77
TRAF1-203ENST00000546084 ARMCX1Q9P291 453 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 TSR3Q9UJK0 312 aaKnown RBP10.27□□□□□ -0.77
TRAF1-203ENST00000546084 TIMM13Q9Y5L4 95 aaPredicted RBP10.27□□□□□ -0.77
TRAF1-203ENST00000546084 LRP5O75197 1615 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 CITO14578 2027 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 LOC100653049A0A140TA62 436 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 KRT34O76011 436 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 CD48P09326 243 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 NCF2P19878 526 aaPredicted RBP10.27□□□□□ -0.77
TRAF1-203ENST00000546084 GLRA2P23416 452 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 ALCAMQ13740 583 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 SPARCL1Q14515 664 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 SUPT20HL1Q3ZLR7 823 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 TREML2Q5T2D2 321 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 SLFN12LQ6IEE8 588 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 CCDC62Q6P9F0 684 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 FAM71AQ8IYT1 594 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 ZDHHC14Q8IZN3 488 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 MCUQ8NE86 351 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms