RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 PCMTD2Q9NV79 361 aa14.92□□□□□ -0.02
SRP54-202ENST00000546080 PCDHAC2Q9Y5I4 1007 aa14.92□□□□□ -0.02
SRP54-202ENST00000546080 SMCHD1A6NHR9 2005 aa14.92□□□□□ -0.02
SRP54-202ENST00000546080 DENND3A2RUS2 1198 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 TMEM150BA6NC51 233 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 C2orf71A6NGG8 1288 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 MT-ND3P03897 115 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 ITGAVP06756 1048 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 LYNP07948 512 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 DLDP09622 509 aaKnown RBP14.91□□□□□ -0.02
SRP54-202ENST00000546080 MYL2P10916 166 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 HOXA10P31260 410 aaPredicted RBP14.91□□□□□ -0.02
SRP54-202ENST00000546080 SSTR3P32745 418 aaPredicted RBP14.91□□□□□ -0.02
SRP54-202ENST00000546080 RAP1GDS1P52306 607 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 JAG1P78504 1218 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 DSG1Q02413 1049 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 PRKD1Q15139 912 aaPredicted RBP14.91□□□□□ -0.02
SRP54-202ENST00000546080 WDR44Q5JSH3 913 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 C6orf163Q5TEZ5 329 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 SPOCD1Q6ZMY3 1216 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 CHSY1Q86X52 802 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 RHPN2Q8IUC4 686 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 DCAKDQ8WVC6 231 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 TTC17Q96AE7 1141 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 VCPIP1Q96JH7 1222 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 PARVAQ9NVD7 372 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 DDX43Q9NXZ2 648 aaKnown RBP14.91□□□□□ -0.02
SRP54-202ENST00000546080 F8W8V4 182 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 MAGEC1O60732 1142 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 CIB2O75838 187 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 CFHP08603 1231 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 ZCCHC18P0CG32 403 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 TCF4P15884 667 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 ITGB5P18084 799 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 BGNP21810 368 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 GSTT1P30711 240 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 CPA2P48052 419 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 NEK3P51956 506 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 IZUMO2Q6UXV1 221 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 FAM196AQ6ZSG2 479 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 ARHGAP22Q7Z5H3 698 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 PALM2Q8IXS6 379 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 PPIL6Q8IXY8 311 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 SP8Q8IXZ3 490 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 DRAXINQ8NBI3 349 aaPredicted RBP14.91□□□□□ -0.02
SRP54-202ENST00000546080 TMEM161BQ8NDZ6 487 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 FBXO36Q8NEA4 188 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 FBXL18Q96ME1 805 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 IDI2Q9BXS1 227 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 PHACTR1Q9C0D0 580 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 ZCWPW1Q9H0M4 648 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 DMAP1Q9NPF5 467 aaPredicted RBP14.91□□□□□ -0.02
SRP54-202ENST00000546080 KCNH7Q9NS40 1196 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 ARMCX1Q9P291 453 aa14.91□□□□□ -0.02
SRP54-202ENST00000546080 FARP1Q9Y4F1 1045 aaPredicted RBP14.91□□□□□ -0.02
SRP54-202ENST00000546080 BTAF1O14981 1849 aa14.9□□□□□ -0.02
SRP54-202ENST00000546080 B2RBV5 119 aa14.9□□□□□ -0.02
SRP54-202ENST00000546080 H3BRJ5 948 aa14.9□□□□□ -0.02
SRP54-202ENST00000546080 PLSCR1O15162 318 aa14.9□□□□□ -0.02
SRP54-202ENST00000546080 ANPEPP15144 967 aa14.9□□□□□ -0.02
SRP54-202ENST00000546080 GNA15P30679 374 aa14.9□□□□□ -0.02
SRP54-202ENST00000546080 GAD2Q05329 585 aa14.9□□□□□ -0.02
SRP54-202ENST00000546080 DMP1Q13316 513 aaPredicted RBP14.9□□□□□ -0.02
SRP54-202ENST00000546080 FNBP1LQ5T0N5 605 aa14.9□□□□□ -0.02
SRP54-202ENST00000546080 RASIP1Q5U651 963 aa14.9□□□□□ -0.02
SRP54-202ENST00000546080 SAMD1Q6SPF0 538 aaPredicted RBP14.9□□□□□ -0.02
SRP54-202ENST00000546080 NET1Q7Z628 596 aaPredicted RBP14.9□□□□□ -0.02
SRP54-202ENST00000546080 PHF13Q86YI8 300 aaPredicted RBP14.9□□□□□ -0.02
SRP54-202ENST00000546080 TMPRSS6Q8IU80 811 aa14.9□□□□□ -0.02
SRP54-202ENST00000546080 GPD1LQ8N335 351 aa14.9□□□□□ -0.02
SRP54-202ENST00000546080 NKD2Q969F2 451 aaPredicted RBP14.9□□□□□ -0.02
SRP54-202ENST00000546080 FAM84AQ96KN4 292 aa14.9□□□□□ -0.02
SRP54-202ENST00000546080 FAM111AQ96PZ2 611 aa14.9□□□□□ -0.02
SRP54-202ENST00000546080 EPAS1Q99814 870 aa14.9□□□□□ -0.02
SRP54-202ENST00000546080 DDX50Q9BQ39 737 aaKnown RBP14.9□□□□□ -0.02
SRP54-202ENST00000546080 NMUR2Q9GZQ4 415 aa14.9□□□□□ -0.02
SRP54-202ENST00000546080 ASCC2Q9H1I8 757 aaPredicted RBP14.9□□□□□ -0.02
SRP54-202ENST00000546080 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.9□□□□□ -0.02
SRP54-202ENST00000546080 LRRC37AA6NMS7 1700 aa14.9□□□□□ -0.02
SRP54-202ENST00000546080 hCG_1818297A0A087WSY0 165 aa14.9□□□□□ -0.02
SRP54-202ENST00000546080 IQANK1A0A1B0GTG1 560 aa14.9□□□□□ -0.02
SRP54-202ENST00000546080 A0A1B0GVG6 124 aa14.9□□□□□ -0.02
SRP54-202ENST00000546080 ECE1P42892 770 aa14.9□□□□□ -0.02
SRP54-202ENST00000546080 NPTX2P47972 431 aa14.9□□□□□ -0.02
SRP54-202ENST00000546080 AP2B1P63010 937 aa14.9□□□□□ -0.02
SRP54-202ENST00000546080 C1QBPQ07021 282 aaKnown RBP14.9□□□□□ -0.02
SRP54-202ENST00000546080 DLGAP5Q15398 846 aa14.9□□□□□ -0.02
SRP54-202ENST00000546080 MSS51Q4VC12 460 aa14.9□□□□□ -0.02
SRP54-202ENST00000546080 BRDTQ58F21 947 aaPredicted RBP14.9□□□□□ -0.02
SRP54-202ENST00000546080 TFDP3Q5H9I0 405 aa14.9□□□□□ -0.02
SRP54-202ENST00000546080 FAM91A1Q658Y4 838 aa14.9□□□□□ -0.02
SRP54-202ENST00000546080 ALYREFQ86V81 257 aaKnown RBP14.9□□□□□ -0.02
SRP54-202ENST00000546080 ABRAQ8N0Z2 381 aa14.9□□□□□ -0.02
SRP54-202ENST00000546080 B4GALNT2Q8NHY0 566 aa14.9□□□□□ -0.02
SRP54-202ENST00000546080 EZH1Q92800 747 aaPredicted RBP14.9□□□□□ -0.02
SRP54-202ENST00000546080 APOPT1Q96IL0 206 aa14.9□□□□□ -0.02
SRP54-202ENST00000546080 KMT5AQ9NQR1 393 aa14.9□□□□□ -0.02
SRP54-202ENST00000546080 ARHGEF4Q9NR80 690 aa14.9□□□□□ -0.02
SRP54-202ENST00000546080 GINM1Q9NU53 330 aa14.9□□□□□ -0.02
SRP54-202ENST00000546080 NDE1Q9NXR1 346 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms