RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 ATAD1Q8NBU5 361 aa18.65■□□□□ 0.58
CD9-211ENST00000546073 MYCBPAPQ8TBZ2 947 aa18.65■□□□□ 0.58
CD9-211ENST00000546073 RPGRIP1Q96KN7 1286 aa18.65■□□□□ 0.58
CD9-211ENST00000546073 TUBGCP2Q9BSJ2 902 aa18.65■□□□□ 0.58
CD9-211ENST00000546073 SMYD3Q9H7B4 428 aa18.65■□□□□ 0.58
CD9-211ENST00000546073 ASAH2Q9NR71 780 aa18.65■□□□□ 0.58
CD9-211ENST00000546073 SLC27A5Q9Y2P5 690 aa18.65■□□□□ 0.58
CD9-211ENST00000546073 TRANK1O15050 2925 aa18.65■□□□□ 0.58
CD9-211ENST00000546073 BMP1P13497 986 aa18.64■□□□□ 0.57
CD9-211ENST00000546073 CD58P19256 250 aa18.64■□□□□ 0.57
CD9-211ENST00000546073 FSHRP23945 695 aa18.64■□□□□ 0.57
CD9-211ENST00000546073 GBP2P32456 591 aaPredicted RBP18.64■□□□□ 0.57
CD9-211ENST00000546073 GRIK1P39086 918 aa18.64■□□□□ 0.57
CD9-211ENST00000546073 CDH8P55286 799 aa18.64■□□□□ 0.57
CD9-211ENST00000546073 PSMC1P62191 440 aaKnown RBP18.64■□□□□ 0.57
CD9-211ENST00000546073 LRMPQ12912 555 aa18.64■□□□□ 0.57
CD9-211ENST00000546073 ANO6Q4KMQ2 910 aa18.64■□□□□ 0.57
CD9-211ENST00000546073 PABPC1LQ4VXU2 614 aaKnown RBP18.64■□□□□ 0.57
CD9-211ENST00000546073 MDH1BQ5I0G3 518 aa18.64■□□□□ 0.57
CD9-211ENST00000546073 GRASPQ7Z6J2 395 aaPredicted RBP18.64■□□□□ 0.57
CD9-211ENST00000546073 SCN4BQ8IWT1 228 aa18.64■□□□□ 0.57
CD9-211ENST00000546073 ADHFE1Q8IWW8 467 aa18.64■□□□□ 0.57
CD9-211ENST00000546073 PPM1KQ8N3J5 372 aa18.64■□□□□ 0.57
CD9-211ENST00000546073 TDRD5Q8NAT2 981 aaKnown RBP18.64■□□□□ 0.57
CD9-211ENST00000546073 B3GALNT2Q8NCR0 500 aa18.64■□□□□ 0.57
CD9-211ENST00000546073 EHBP1Q8NDI1 1231 aa18.64■□□□□ 0.57
CD9-211ENST00000546073 ADAMTS19Q8TE59 1207 aa18.64■□□□□ 0.57
CD9-211ENST00000546073 KBTBD7Q8WVZ9 684 aa18.64■□□□□ 0.57
CD9-211ENST00000546073 SUSD6Q92537 303 aa18.64■□□□□ 0.57
CD9-211ENST00000546073 TMEM209Q96SK2 561 aa18.64■□□□□ 0.57
CD9-211ENST00000546073 UHRF1Q96T88 793 aaPredicted RBP18.64■□□□□ 0.57
CD9-211ENST00000546073 WDR6Q9NNW5 1121 aaKnown RBP18.64■□□□□ 0.57
CD9-211ENST00000546073 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.64■□□□□ 0.57
CD9-211ENST00000546073 YIPF1Q9Y548 306 aa18.64■□□□□ 0.57
CD9-211ENST00000546073 MYO7AQ13402 2215 aa18.64■□□□□ 0.57
CD9-211ENST00000546073 SYCE3A1L190 88 aa18.63■□□□□ 0.57
CD9-211ENST00000546073 GOLGA6L19H0YKK7 550 aa18.63■□□□□ 0.57
CD9-211ENST00000546073 TRIM66O15016 1216 aa18.63■□□□□ 0.57
CD9-211ENST00000546073 SEC24AO95486 1093 aa18.63■□□□□ 0.57
CD9-211ENST00000546073 LMO2P25791 158 aa18.63■□□□□ 0.57
CD9-211ENST00000546073 RAP1GAPP47736 663 aa18.63■□□□□ 0.57
CD9-211ENST00000546073 ZNF165P49910 485 aa18.63■□□□□ 0.57
CD9-211ENST00000546073 NDST1P52848 882 aa18.63■□□□□ 0.57
CD9-211ENST00000546073 EXOC3L4Q17RC7 722 aa18.63■□□□□ 0.57
CD9-211ENST00000546073 VWA3BQ502W6 1294 aa18.63■□□□□ 0.57
CD9-211ENST00000546073 HSP90AA4PQ58FG1 418 aa18.63■□□□□ 0.57
CD9-211ENST00000546073 TCP11X2Q5H9J9 407 aa18.63■□□□□ 0.57
CD9-211ENST00000546073 VSTM1Q6UX27 236 aa18.63■□□□□ 0.57
CD9-211ENST00000546073 LIMS2Q7Z4I7 341 aa18.63■□□□□ 0.57
CD9-211ENST00000546073 OSTM1Q86WC4 334 aa18.63■□□□□ 0.57
CD9-211ENST00000546073 CORO1BQ9BR76 489 aa18.63■□□□□ 0.57
CD9-211ENST00000546073 BCO2Q9BYV7 579 aa18.63■□□□□ 0.57
CD9-211ENST00000546073 ELOVL4Q9GZR5 314 aa18.63■□□□□ 0.57
CD9-211ENST00000546073 GCNT4Q9P109 453 aa18.63■□□□□ 0.57
CD9-211ENST00000546073 UXTQ9UBK9 157 aaPredicted RBP18.63■□□□□ 0.57
CD9-211ENST00000546073 USTQ9Y2C2 406 aa18.63■□□□□ 0.57
CD9-211ENST00000546073 MRPS23Q9Y3D9 190 aaKnown RBP18.63■□□□□ 0.57
CD9-211ENST00000546073 ZFP37Q9Y6Q3 630 aaPredicted RBP18.63■□□□□ 0.57
CD9-211ENST00000546073 CLUHO75153 1309 aa18.63■□□□□ 0.57
CD9-211ENST00000546073 GTPBP10A4D1E9 387 aaKnown RBP18.62■□□□□ 0.57
CD9-211ENST00000546073 CSH1P0DML2 217 aa18.62■□□□□ 0.57
CD9-211ENST00000546073 CSH2P0DML3 217 aa18.62■□□□□ 0.57
CD9-211ENST00000546073 HAPLN1P10915 354 aaPredicted RBP18.62■□□□□ 0.57
CD9-211ENST00000546073 ASPAP45381 313 aa18.62■□□□□ 0.57
CD9-211ENST00000546073 MFAP3P55082 362 aa18.62■□□□□ 0.57
CD9-211ENST00000546073 CUL2Q13617 745 aa18.62■□□□□ 0.57
CD9-211ENST00000546073 CFAP221Q4G0U5 840 aa18.62■□□□□ 0.57
CD9-211ENST00000546073 FILIP1LQ4L180 1135 aa18.62■□□□□ 0.57
CD9-211ENST00000546073 ARHGAP15Q53QZ3 475 aa18.62■□□□□ 0.57
CD9-211ENST00000546073 ENOSF1Q7L5Y1 443 aa18.62■□□□□ 0.57
CD9-211ENST00000546073 SEMA4DQ92854 862 aa18.62■□□□□ 0.57
CD9-211ENST00000546073 MYLPFQ96A32 169 aa18.62■□□□□ 0.57
CD9-211ENST00000546073 CEP295NLQ96MC4 621 aa18.62■□□□□ 0.57
CD9-211ENST00000546073 HEXIM2Q96MH2 286 aaKnown RBP18.62■□□□□ 0.57
CD9-211ENST00000546073 BPIFA3Q9BQP9 254 aa18.62■□□□□ 0.57
CD9-211ENST00000546073 RTP3Q9BQQ7 232 aa18.62■□□□□ 0.57
CD9-211ENST00000546073 NDST4Q9H3R1 872 aa18.62■□□□□ 0.57
CD9-211ENST00000546073 ANK1P16157 1881 aa18.62■□□□□ 0.57
CD9-211ENST00000546073 CDH23Q9H251 3354 aa18.61■□□□□ 0.57
CD9-211ENST00000546073 MYBPHLA2RUH7 354 aa18.61■□□□□ 0.57
CD9-211ENST00000546073 MYL4P12829 197 aa18.61■□□□□ 0.57
CD9-211ENST00000546073 MAGEA11P43364 429 aa18.61■□□□□ 0.57
CD9-211ENST00000546073 NFKBIBQ15653 356 aa18.61■□□□□ 0.57
CD9-211ENST00000546073 SCARA3Q6AZY7 606 aa18.61■□□□□ 0.57
CD9-211ENST00000546073 FAM171BQ6P995 826 aa18.61■□□□□ 0.57
CD9-211ENST00000546073 C11orf57Q6ZUT1 292 aaPredicted RBP18.61■□□□□ 0.57
CD9-211ENST00000546073 GET4Q7L5D6 327 aaPredicted RBP18.61■□□□□ 0.57
CD9-211ENST00000546073 ACOT1Q86TX2 421 aa18.61■□□□□ 0.57
CD9-211ENST00000546073 LRRTM3Q86VH5 581 aa18.61■□□□□ 0.57
CD9-211ENST00000546073 AOPEPQ8N6M6 819 aa18.61■□□□□ 0.57
CD9-211ENST00000546073 PCMTD1Q96MG8 357 aaPredicted RBP18.61■□□□□ 0.57
CD9-211ENST00000546073 INTS2Q9H0H0 1204 aaKnown RBP18.61■□□□□ 0.57
CD9-211ENST00000546073 POMKQ9H5K3 350 aa18.61■□□□□ 0.57
CD9-211ENST00000546073 CISHQ9NSE2 258 aa18.61■□□□□ 0.57
CD9-211ENST00000546073 SAMSN1Q9NSI8 373 aaKnown RBP18.61■□□□□ 0.57
CD9-211ENST00000546073 FANCLQ9NW38 375 aa18.61■□□□□ 0.57
CD9-211ENST00000546073 ATP2C2O75185 946 aa18.6■□□□□ 0.57
CD9-211ENST00000546073 RHOP08100 348 aa18.6■□□□□ 0.57
CD9-211ENST00000546073 BDNFP23560 247 aa18.6■□□□□ 0.57
CD9-211ENST00000546073 GJD3Q8N144 294 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms