RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 TNIP2Q8NFZ5 429 aa13.05□□□□□ -0.32
COL4A6-209ENST00000545689 CYP3A43Q9HB55 503 aa13.05□□□□□ -0.32
COL4A6-209ENST00000545689 ZBBXA8MT70 800 aa13.05□□□□□ -0.32
COL4A6-209ENST00000545689 AP5Z1O43299 807 aa13.05□□□□□ -0.32
COL4A6-209ENST00000545689 PTENP60484 403 aa13.05□□□□□ -0.32
COL4A6-209ENST00000545689 AASDHQ4L235 1098 aaPredicted RBP13.05□□□□□ -0.32
COL4A6-209ENST00000545689 ZNF571Q7Z3V5 609 aaPredicted RBP13.05□□□□□ -0.32
COL4A6-209ENST00000545689 EIF1ADQ8N9N8 165 aaKnown RBP13.05□□□□□ -0.32
COL4A6-209ENST00000545689 ATXN7L3BQ96GX2 97 aa13.05□□□□□ -0.32
COL4A6-209ENST00000545689 SH2D3AQ9BRG2 576 aa13.05□□□□□ -0.32
COL4A6-209ENST00000545689 TMEM39BQ9GZU3 492 aa13.05□□□□□ -0.32
COL4A6-209ENST00000545689 ANKZF1Q9H8Y5 726 aa13.05□□□□□ -0.32
COL4A6-209ENST00000545689 NPTX2P47972 431 aa13.05□□□□□ -0.32
COL4A6-209ENST00000545689 RAB42Q8N4Z0 105 aa13.05□□□□□ -0.32
COL4A6-209ENST00000545689 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.05□□□□□ -0.32
COL4A6-209ENST00000545689 DPP3Q9NY33 737 aa13.05□□□□□ -0.32
COL4A6-209ENST00000545689 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.05□□□□□ -0.32
COL4A6-209ENST00000545689 CYBBP04839 570 aa13.05□□□□□ -0.32
COL4A6-209ENST00000545689 SEC24CP53992 1094 aa13.05□□□□□ -0.32
COL4A6-209ENST00000545689 ANGEL2Q5VTE6 544 aaKnown RBP13.05□□□□□ -0.32
COL4A6-209ENST00000545689 LRRC34Q8IZ02 419 aa13.05□□□□□ -0.32
COL4A6-209ENST00000545689 ZNF555Q8NEP9 628 aa13.05□□□□□ -0.32
COL4A6-209ENST00000545689 GPRC5AQ8NFJ5 357 aa13.05□□□□□ -0.32
COL4A6-209ENST00000545689 PCDHGB4Q9UN71 923 aa13.05□□□□□ -0.32
COL4A6-209ENST00000545689 RSPH10B2B2RC85 870 aa13.05□□□□□ -0.32
COL4A6-209ENST00000545689 IGF2BP3O00425 579 aaKnown RBP eCLIP13.05□□□□□ -0.32
COL4A6-209ENST00000545689 TOMM70O94826 608 aa13.05□□□□□ -0.32
COL4A6-209ENST00000545689 RPLP2P05387 115 aaKnown RBP13.05□□□□□ -0.32
COL4A6-209ENST00000545689 RSPH10BP0C881 870 aa13.05□□□□□ -0.32
COL4A6-209ENST00000545689 SLC2A3P11169 496 aa13.05□□□□□ -0.32
COL4A6-209ENST00000545689 SERPINB10P48595 397 aa13.05□□□□□ -0.32
COL4A6-209ENST00000545689 AGO4Q9HCK5 861 aaKnown RBP13.05□□□□□ -0.32
COL4A6-209ENST00000545689 LSM7Q9UK45 103 aaKnown RBP13.05□□□□□ -0.32
COL4A6-209ENST00000545689 B2RBV5 119 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 DPYSL4O14531 572 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 PTGER2P43116 358 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 SLC7A14Q8TBB6 771 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 DCUN1D1Q96GG9 259 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 AGAP3Q96P47 875 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 TFR2Q9UP52 801 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 UBE2Q2LH0YL09 131 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 FAM200BP0CF97 657 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 CETPP11597 493 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 ACADSP16219 412 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 CPT1AP50416 773 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 C1QBPQ07021 282 aaKnown RBP13.04□□□□□ -0.32
COL4A6-209ENST00000545689 CHI3L2Q15782 390 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 SLC16A10Q8TF71 515 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 RIC8BQ9NVN3 520 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 POLLQ9UGP5 575 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 SUPT3HO75486 399 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 NDUFS3O75489 264 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 ZBTB7AO95365 584 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 VHLP40337 213 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 GEMP55040 296 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 MEA1Q16626 185 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 ADGRA1Q86SQ6 560 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 CCDC126Q96EE4 140 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 GGT7Q9UJ14 662 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 BLOC1S6Q9UL45 172 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 PHTF1Q9UMS5 762 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 TM9SF1O15321 606 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 ITGB3P05106 788 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 GHRP10912 638 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 KCNA1Q09470 495 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 PRPF39Q86UA1 669 aaKnown RBP13.04□□□□□ -0.32
COL4A6-209ENST00000545689 CBWD2Q8IUF1 395 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 GOLGA8TH3BQL2 631 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 RPS6KA5O75582 802 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 HIST1H2AGP0C0S8 130 aaPredicted RBP13.04□□□□□ -0.32
COL4A6-209ENST00000545689 HIST1H2ADP20671 130 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 FKBP1AP62942 108 aaKnown RBP13.04□□□□□ -0.32
COL4A6-209ENST00000545689 KIAA0895Q8NCT3 520 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 HIST1H2AHQ96KK5 128 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 HIST1H2AJQ99878 128 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 H2AFJQ9BTM1 129 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 ZBED2Q9BTP6 218 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 PPP2R3BQ9Y5P8 575 aa13.04□□□□□ -0.32
COL4A6-209ENST00000545689 TRIM49D1C9J1S8 452 aa13.03□□□□□ -0.32
COL4A6-209ENST00000545689 DNAJC6O75061 913 aa13.03□□□□□ -0.32
COL4A6-209ENST00000545689 CYP2C9P11712 490 aa13.03□□□□□ -0.32
COL4A6-209ENST00000545689 CYP4A22Q5TCH4 519 aa13.03□□□□□ -0.32
COL4A6-209ENST00000545689 NOP9Q86U38 636 aaKnown RBP13.03□□□□□ -0.32
COL4A6-209ENST00000545689 VCPIP1Q96JH7 1222 aa13.03□□□□□ -0.32
COL4A6-209ENST00000545689 LACRTQ9GZZ8 138 aa13.03□□□□□ -0.32
COL4A6-209ENST00000545689 DEFB129Q9H1M3 183 aa13.03□□□□□ -0.32
COL4A6-209ENST00000545689 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.03□□□□□ -0.32
COL4A6-209ENST00000545689 KCNH4Q9UQ05 1017 aa13.03□□□□□ -0.32
COL4A6-209ENST00000545689 AKAP3O75969 853 aa13.03□□□□□ -0.32
COL4A6-209ENST00000545689 PDGFRBP09619 1106 aa13.03□□□□□ -0.32
COL4A6-209ENST00000545689 GMPSP49915 693 aaPredicted RBP13.03□□□□□ -0.32
COL4A6-209ENST00000545689 SERPINB8P50452 374 aa13.03□□□□□ -0.32
COL4A6-209ENST00000545689 SPOCD1Q6ZMY3 1216 aa13.03□□□□□ -0.32
COL4A6-209ENST00000545689 SH3RF1Q7Z6J0 888 aa13.03□□□□□ -0.32
COL4A6-209ENST00000545689 ILDR1Q86SU0 546 aaPredicted RBP13.03□□□□□ -0.32
COL4A6-209ENST00000545689 STKLD1Q8NE28 680 aa13.03□□□□□ -0.32
COL4A6-209ENST00000545689 UBA3Q8TBC4 463 aa13.03□□□□□ -0.32
COL4A6-209ENST00000545689 PACSIN1Q9BY11 444 aa13.03□□□□□ -0.32
COL4A6-209ENST00000545689 FAM49BQ9NUQ9 324 aa13.03□□□□□ -0.32
COL4A6-209ENST00000545689 ZNF263O14978 683 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms