RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 SGCGQ13326 291 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 SCARB2Q14108 478 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 GALNT3Q14435 633 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 KRT32Q14532 448 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 KCNAB1Q14722 419 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 PPA1Q15181 289 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 GFOD2Q3B7J2 385 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 MINDY4Q4G0A6 757 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 RTP2Q5QGT7 225 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 C6orf10Q5SRN2 563 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 RBM20Q5T481 1227 aaKnown RBP5.38□□□□□ -1.55
UBE4A-203ENST00000545354 ANXA8L1Q5VT79 327 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 IL31Q6EBC2 164 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 ZNF574Q6ZN55 896 aaPredicted RBP5.38□□□□□ -1.55
UBE4A-203ENST00000545354 CATSPERGQ6ZRH7 1159 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 Q6ZUG5 572 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 HDDC2Q7Z4H3 204 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 CCDC25Q86WR0 208 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 DGKHQ86XP1 1220 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 MIB1Q86YT6 1006 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 LRRC34Q8IZ02 419 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 REXO1Q8N1G1 1221 aaKnown RBP5.38□□□□□ -1.55
UBE4A-203ENST00000545354 ARL14Q8N4G2 192 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 DPP10Q8N608 796 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 PLD5Q8N7P1 536 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 KBTBD3Q8NAB2 608 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 ZBTB38Q8NAP3 1195 aaPredicted RBP5.38□□□□□ -1.55
UBE4A-203ENST00000545354 PLBD2Q8NHP8 589 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 CPLX3Q8WVH0 158 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 RAPGEF4Q8WZA2 1011 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 MRPS27Q92552 414 aaKnown RBP5.38□□□□□ -1.55
UBE4A-203ENST00000545354 DGCR14Q96DF8 476 aaKnown RBP5.38□□□□□ -1.55
UBE4A-203ENST00000545354 BTBD6Q96KE9 485 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 ELAC2Q9BQ52 826 aaKnown RBP5.38□□□□□ -1.55
UBE4A-203ENST00000545354 EIF2AK1Q9BQI3 630 aaKnown RBP5.38□□□□□ -1.55
UBE4A-203ENST00000545354 SYT15Q9BQS2 421 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 ATP13A3Q9H7F0 1226 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 MARCH7Q9H992 704 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 GDPD2Q9HCC8 539 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 TM9SF3Q9HD45 589 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 TLR7Q9NYK1 1049 aaKnown RBP5.38□□□□□ -1.55
UBE4A-203ENST00000545354 HMG20BQ9P0W2 317 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 UVRAGQ9P2Y5 699 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 VPS4AQ9UN37 437 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 ERVK-19Q9WJR5 959 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 INPP5FQ9Y2H2 1132 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 ZNF175Q9Y473 711 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 MSH6P52701 1360 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 POGZQ7Z3K3 1410 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 ATP10AO60312 1499 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 ABCA9Q8IUA7 1624 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 RCCD1A6NED2 376 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 MAGEB3O15480 346 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 TXNL1O43396 289 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 SMAD6O43541 496 aaKnown RBP5.38□□□□□ -1.55
UBE4A-203ENST00000545354 PLEKHA8P1O95397 391 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 ITGBL1O95965 494 aaPredicted RBP5.38□□□□□ -1.55
UBE4A-203ENST00000545354 TFRCP02786 760 aaKnown RBP5.38□□□□□ -1.55
UBE4A-203ENST00000545354 POLR3DP05423 398 aaPredicted RBP5.38□□□□□ -1.55
UBE4A-203ENST00000545354 COL6A2P12110 1019 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 PTX3P26022 381 aaPredicted RBP5.38□□□□□ -1.55
UBE4A-203ENST00000545354 PIP4K2AP48426 406 aaPredicted RBP5.38□□□□□ -1.55
UBE4A-203ENST00000545354 SERPINB4P48594 390 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 EIF2B2P49770 351 aaKnown RBP5.38□□□□□ -1.55
UBE4A-203ENST00000545354 CCR3P51677 355 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 ATP12AP54707 1039 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 COASYQ13057 564 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 CBLBQ13191 982 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 NR5A1Q13285 461 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 TTLL12Q14166 644 aaPredicted RBP5.38□□□□□ -1.55
UBE4A-203ENST00000545354 TAF12Q16514 161 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 ASIC2Q16515 512 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 HADHQ16836 314 aaKnown RBP5.38□□□□□ -1.55
UBE4A-203ENST00000545354 MAJINQ3KP22 176 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 LIN52Q52LA3 116 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 OLFML2BQ68BL8 750 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 ITPRIPL1Q6GPH6 555 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 PM20D1Q6GTS8 502 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 ZNF425Q6IV72 752 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 LRRC8BQ6P9F7 803 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 TOGARAM2Q6ZUX3 1019 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 KRT73Q86Y46 540 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 DCP2Q8IU60 420 aaKnown RBP5.38□□□□□ -1.55
UBE4A-203ENST00000545354 WDR49Q8IV35 697 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 HID1Q8IV36 788 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.38□□□□□ -1.55
UBE4A-203ENST00000545354 CCDC33Q8N5R6 958 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 MINDY2Q8NBR6 621 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 RBBP8NLQ8NC74 664 aaPredicted RBP5.38□□□□□ -1.55
UBE4A-203ENST00000545354 PIK3C3Q8NEB9 887 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 ZNF473Q8WTR7 871 aaKnown RBP5.38□□□□□ -1.55
UBE4A-203ENST00000545354 ASZ1Q8WWH4 475 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 RFKQ969G6 155 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 MYDGFQ969H8 173 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 RAB7BQ96AH8 199 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 DACT3Q96B18 629 aaPredicted RBP5.38□□□□□ -1.55
UBE4A-203ENST00000545354 ERLEC1Q96DZ1 483 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 EDC3Q96F86 508 aaKnown RBP5.38□□□□□ -1.55
UBE4A-203ENST00000545354 EYA3Q99504 573 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 WACQ9BTA9 647 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms