RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 GTF3C4Q9UKN8 822 aa18.14■□□□□ 0.49
HOXD8-204ENST00000544999 CDH9Q9ULB4 789 aa18.14■□□□□ 0.49
HOXD8-204ENST00000544999 LRRIQ3A6PVS8 624 aaPredicted RBP18.13■□□□□ 0.49
HOXD8-204ENST00000544999 PI15O43692 258 aa18.13■□□□□ 0.49
HOXD8-204ENST00000544999 GABRR2P28476 465 aa18.13■□□□□ 0.49
HOXD8-204ENST00000544999 CDC25CP30307 473 aa18.13■□□□□ 0.49
HOXD8-204ENST00000544999 CASP4P49662 377 aa18.13■□□□□ 0.49
HOXD8-204ENST00000544999 STARD6P59095 220 aa18.13■□□□□ 0.49
HOXD8-204ENST00000544999 TNNC1P63316 161 aa18.13■□□□□ 0.49
HOXD8-204ENST00000544999 CLDN10P78369 228 aa18.13■□□□□ 0.49
HOXD8-204ENST00000544999 PRKCQQ04759 706 aa18.13■□□□□ 0.49
HOXD8-204ENST00000544999 SNW1Q13573 536 aaKnown RBP18.13■□□□□ 0.49
HOXD8-204ENST00000544999 MLF2Q15773 248 aaPredicted RBP18.13■□□□□ 0.49
HOXD8-204ENST00000544999 TAF12Q16514 161 aa18.13■□□□□ 0.49
HOXD8-204ENST00000544999 SLC44A4Q53GD3 710 aa18.13■□□□□ 0.49
HOXD8-204ENST00000544999 ARHGAP15Q53QZ3 475 aa18.13■□□□□ 0.49
HOXD8-204ENST00000544999 FAM171BQ6P995 826 aa18.13■□□□□ 0.49
HOXD8-204ENST00000544999 GUF1Q8N442 669 aaKnown RBP18.13■□□□□ 0.49
HOXD8-204ENST00000544999 GIPC2Q8TF65 315 aa18.13■□□□□ 0.49
HOXD8-204ENST00000544999 DEPDC1BQ8WUY9 529 aa18.13■□□□□ 0.49
HOXD8-204ENST00000544999 SYAP1Q96A49 352 aaPredicted RBP18.13■□□□□ 0.49
HOXD8-204ENST00000544999 E2F7Q96AV8 911 aa18.13■□□□□ 0.49
HOXD8-204ENST00000544999 FUBP3Q96I24 572 aaKnown RBP eCLIP18.13■□□□□ 0.49
HOXD8-204ENST00000544999 MMS19Q96T76 1030 aa18.13■□□□□ 0.49
HOXD8-204ENST00000544999 SYT15Q9BQS2 421 aa18.13■□□□□ 0.49
HOXD8-204ENST00000544999 FRMD4BQ9Y2L6 1034 aa18.13■□□□□ 0.49
HOXD8-204ENST00000544999 MAPK13O15264 365 aa18.12■□□□□ 0.49
HOXD8-204ENST00000544999 HCRTO43612 131 aa18.12■□□□□ 0.49
HOXD8-204ENST00000544999 PHACTR2O75167 634 aa18.12■□□□□ 0.49
HOXD8-204ENST00000544999 TACC1O75410 805 aa18.12■□□□□ 0.49
HOXD8-204ENST00000544999 CSH1P0DML2 217 aa18.12■□□□□ 0.49
HOXD8-204ENST00000544999 CSH2P0DML3 217 aa18.12■□□□□ 0.49
HOXD8-204ENST00000544999 RPL10AP62906 217 aaKnown RBP18.12■□□□□ 0.49
HOXD8-204ENST00000544999 CFAP221Q4G0U5 840 aa18.12■□□□□ 0.49
HOXD8-204ENST00000544999 TDRD10Q5VZ19 366 aaKnown RBP18.12■□□□□ 0.49
HOXD8-204ENST00000544999 VITQ6UXI7 678 aa18.12■□□□□ 0.49
HOXD8-204ENST00000544999 SPATA2LQ8IUW3 424 aaPredicted RBP18.12■□□□□ 0.49
HOXD8-204ENST00000544999 TMC2Q8TDI7 906 aa18.12■□□□□ 0.49
HOXD8-204ENST00000544999 DNASE1L2Q92874 299 aa18.12■□□□□ 0.49
HOXD8-204ENST00000544999 GCNAQ96QF7 691 aa18.12■□□□□ 0.49
HOXD8-204ENST00000544999 MKNK1Q9BUB5 465 aa18.12■□□□□ 0.49
HOXD8-204ENST00000544999 VRTNQ9H8Y1 702 aa18.12■□□□□ 0.49
HOXD8-204ENST00000544999 IL21Q9HBE4 155 aa18.12■□□□□ 0.49
HOXD8-204ENST00000544999 MUC6Q6W4X9 2439 aa18.12■□□□□ 0.49
HOXD8-204ENST00000544999 NUP210Q8TEM1 1887 aaPredicted RBP18.12■□□□□ 0.49
HOXD8-204ENST00000544999 MYBPHLA2RUH7 354 aa18.11■□□□□ 0.49
HOXD8-204ENST00000544999 C4BPAP04003 597 aaKnown RBP18.11■□□□□ 0.49
HOXD8-204ENST00000544999 PSMC3P17980 439 aa18.11■□□□□ 0.49
HOXD8-204ENST00000544999 CYP2F1P24903 491 aa18.11■□□□□ 0.49
HOXD8-204ENST00000544999 LMO2P25791 158 aa18.11■□□□□ 0.49
HOXD8-204ENST00000544999 GPR15P49685 360 aa18.11■□□□□ 0.49
HOXD8-204ENST00000544999 MYL6P60660 151 aa18.11■□□□□ 0.49
HOXD8-204ENST00000544999 BIRC3Q13489 604 aa18.11■□□□□ 0.49
HOXD8-204ENST00000544999 GRM2Q14416 872 aa18.11■□□□□ 0.49
HOXD8-204ENST00000544999 MAPRE1Q15691 268 aaKnown RBP18.11■□□□□ 0.49
HOXD8-204ENST00000544999 WDR72Q3MJ13 1102 aa18.11■□□□□ 0.49
HOXD8-204ENST00000544999 STXBP5Q5T5C0 1151 aa18.11■□□□□ 0.49
HOXD8-204ENST00000544999 GPR158Q5T848 1215 aa18.11■□□□□ 0.49
HOXD8-204ENST00000544999 CEP135Q66GS9 1140 aa18.11■□□□□ 0.49
HOXD8-204ENST00000544999 C4orf50Q6ZRC1 276 aa18.11■□□□□ 0.49
HOXD8-204ENST00000544999 CCDC105Q8IYK2 499 aa18.11■□□□□ 0.49
HOXD8-204ENST00000544999 ENGASEQ8NFI3 743 aa18.11■□□□□ 0.49
HOXD8-204ENST00000544999 MRPL45Q9BRJ2 306 aaKnown RBP18.11■□□□□ 0.49
HOXD8-204ENST00000544999 TRMT61BQ9BVS5 477 aaKnown RBP18.11■□□□□ 0.49
HOXD8-204ENST00000544999 XYLT2Q9H1B5 865 aa18.11■□□□□ 0.49
HOXD8-204ENST00000544999 SNX25Q9H3E2 840 aa18.11■□□□□ 0.49
HOXD8-204ENST00000544999 TASP1Q9H6P5 420 aa18.11■□□□□ 0.49
HOXD8-204ENST00000544999 ZMYM5Q9UJ78 669 aa18.11■□□□□ 0.49
HOXD8-204ENST00000544999 DENND4CQ5VZ89 1909 aa18.1■□□□□ 0.49
HOXD8-204ENST00000544999 HEPACAM2A8MVW5 462 aa18.1■□□□□ 0.49
HOXD8-204ENST00000544999 HMGA1P17096 107 aaKnown RBP18.1■□□□□ 0.49
HOXD8-204ENST00000544999 NR2F2P24468 414 aa18.1■□□□□ 0.49
HOXD8-204ENST00000544999 WEE1P30291 646 aa18.1■□□□□ 0.49
HOXD8-204ENST00000544999 GNL1P36915 607 aaPredicted RBP18.1■□□□□ 0.49
HOXD8-204ENST00000544999 VIPR2P41587 438 aa18.1■□□□□ 0.49
HOXD8-204ENST00000544999 MAGEA11P43364 429 aa18.1■□□□□ 0.49
HOXD8-204ENST00000544999 PSMC1P62191 440 aaKnown RBP18.1■□□□□ 0.49
HOXD8-204ENST00000544999 FAM160A1Q05DH4 1040 aa18.1■□□□□ 0.49
HOXD8-204ENST00000544999 PNOCQ13519 176 aa18.1■□□□□ 0.49
HOXD8-204ENST00000544999 CCDC142Q17RM4 750 aa18.1■□□□□ 0.49
HOXD8-204ENST00000544999 ARID3BQ8IVW6 561 aaPredicted RBP18.1■□□□□ 0.49
HOXD8-204ENST00000544999 MFSD6LQ8IWD5 586 aa18.1■□□□□ 0.49
HOXD8-204ENST00000544999 OR6B3Q8NGW1 331 aa18.1■□□□□ 0.49
HOXD8-204ENST00000544999 IRF7Q92985 503 aa18.1■□□□□ 0.49
HOXD8-204ENST00000544999 DDX23Q9BUQ8 820 aaKnown RBP18.1■□□□□ 0.49
HOXD8-204ENST00000544999 BRD9Q9H8M2 597 aa18.1■□□□□ 0.49
HOXD8-204ENST00000544999 CRTAC1Q9NQ79 661 aa18.1■□□□□ 0.49
HOXD8-204ENST00000544999 TRPV5Q9NQA5 729 aa18.1■□□□□ 0.49
HOXD8-204ENST00000544999 RMND1Q9NWS8 449 aa18.1■□□□□ 0.49
HOXD8-204ENST00000544999 OBP2AQ9NY56 170 aa18.1■□□□□ 0.49
HOXD8-204ENST00000544999 MAGEC2Q9UBF1 373 aaPredicted RBP18.1■□□□□ 0.49
HOXD8-204ENST00000544999 MAPK8IP1Q9UQF2 711 aa18.1■□□□□ 0.49
HOXD8-204ENST00000544999 SIT1Q9Y3P8 196 aa18.1■□□□□ 0.49
HOXD8-204ENST00000544999 NCANO14594 1321 aa18.09■□□□□ 0.49
HOXD8-204ENST00000544999 KANSL1LA0AUZ9 987 aa18.09■□□□□ 0.49
HOXD8-204ENST00000544999 IKBKBO14920 756 aa18.09■□□□□ 0.49
HOXD8-204ENST00000544999 ATP2C2O75185 946 aa18.09■□□□□ 0.49
HOXD8-204ENST00000544999 NOL4O94818 638 aa18.09■□□□□ 0.49
HOXD8-204ENST00000544999 F11P03951 625 aa18.09■□□□□ 0.49
HOXD8-204ENST00000544999 PDGFRBP09619 1106 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms