RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 CATSPER3Q86XQ3 398 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 SPATA18Q8TC71 538 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 TEKT4Q8WW24 435 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 XPO6Q96QU8 1125 aaKnown RBP9.4□□□□□ -0.9
NECAP1-207ENST00000544891 CNPY3Q9BT09 278 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 NEUROG2Q9H2A3 272 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 NMRK1Q9NWW6 199 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 XPO7Q9UIA9 1087 aaKnown RBP9.4□□□□□ -0.9
NECAP1-207ENST00000544891 DBR1Q9UK59 544 aaKnown RBP9.4□□□□□ -0.9
NECAP1-207ENST00000544891 EIF3HO15372 352 aaKnown RBP eCLIP9.4□□□□□ -0.91
NECAP1-207ENST00000544891 GNL1P36915 607 aaPredicted RBP9.4□□□□□ -0.91
NECAP1-207ENST00000544891 GMPSP49915 693 aaPredicted RBP9.4□□□□□ -0.91
NECAP1-207ENST00000544891 TGFB2P61812 414 aa9.4□□□□□ -0.91
NECAP1-207ENST00000544891 FKBP1AP62942 108 aaKnown RBP9.4□□□□□ -0.91
NECAP1-207ENST00000544891 ARHGEF7Q14155 803 aa9.4□□□□□ -0.91
NECAP1-207ENST00000544891 USP10Q14694 798 aaKnown RBP9.4□□□□□ -0.91
NECAP1-207ENST00000544891 TTC39BQ5VTQ0 682 aaPredicted RBP9.4□□□□□ -0.91
NECAP1-207ENST00000544891 SLC13A5Q86YT5 568 aaPredicted RBP9.4□□□□□ -0.91
NECAP1-207ENST00000544891 DDIASQ8IXT1 998 aa9.4□□□□□ -0.91
NECAP1-207ENST00000544891 DNERQ8NFT8 737 aa9.4□□□□□ -0.91
NECAP1-207ENST00000544891 MCEEQ96PE7 176 aa9.4□□□□□ -0.91
NECAP1-207ENST00000544891 DNAJC7Q99615 494 aa9.4□□□□□ -0.91
NECAP1-207ENST00000544891 PRPF18Q99633 342 aaKnown RBP9.4□□□□□ -0.91
NECAP1-207ENST00000544891 TMEM117Q9H0C3 514 aa9.4□□□□□ -0.91
NECAP1-207ENST00000544891 ECT2Q9H8V3 914 aa9.4□□□□□ -0.91
NECAP1-207ENST00000544891 CASS4Q9NQ75 786 aa9.4□□□□□ -0.91
NECAP1-207ENST00000544891 PKD2L2Q9NZM6 624 aa9.4□□□□□ -0.91
NECAP1-207ENST00000544891 SCHIP1Q9P0W5 487 aaPredicted RBP9.4□□□□□ -0.91
NECAP1-207ENST00000544891 KIF17Q9P2E2 1029 aa9.4□□□□□ -0.91
NECAP1-207ENST00000544891 HPS5Q9UPZ3 1129 aa9.4□□□□□ -0.91
NECAP1-207ENST00000544891 HPSEQ9Y251 543 aa9.4□□□□□ -0.91
NECAP1-207ENST00000544891 RGPD3A6NKT7 1758 aaPredicted RBP9.4□□□□□ -0.91
NECAP1-207ENST00000544891 RGPD4Q7Z3J3 1758 aa9.4□□□□□ -0.91
NECAP1-207ENST00000544891 CCL15-CCL14A0A0B4J2E2 113 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 TRPC5OSA6NMA1 111 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 MYL2P10916 166 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 HARS2P49590 506 aaKnown RBP9.39□□□□□ -0.91
NECAP1-207ENST00000544891 PTPAQ15257 358 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 CCL15Q16663 113 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 RABGAP1LQ5R372 815 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 FKBP1CQ5VVH2 108 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 ICE2Q659A1 982 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 TIGD7Q6NT04 549 aaPredicted RBP9.39□□□□□ -0.91
NECAP1-207ENST00000544891 GPAT2Q6NUI2 795 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 NT5DC4Q86YG4 428 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 SLC7A14Q8TBB6 771 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 SPATA16Q9BXB7 569 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 AGPAT5Q9NUQ2 364 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.39□□□□□ -0.91
NECAP1-207ENST00000544891 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.39□□□□□ -0.91
NECAP1-207ENST00000544891 DPP7Q9UHL4 492 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 ZNF263O14978 683 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 NCAM2O15394 837 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 CST8O60676 142 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 SLC9A1P19634 815 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 KPNA1P52294 538 aaPredicted RBP9.39□□□□□ -0.91
NECAP1-207ENST00000544891 TMEM132BQ14DG7 1078 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 CENPPQ6IPU0 288 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 RAD9BQ6WBX8 426 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 RBM43Q6ZSC3 357 aaKnown RBP9.39□□□□□ -0.91
NECAP1-207ENST00000544891 KSR1Q8IVT5 923 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 PARP9Q8IXQ6 854 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 NAGPAQ9UK23 515 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 AAR2Q9Y312 384 aaKnown RBP9.39□□□□□ -0.91
NECAP1-207ENST00000544891 FAM205AQ6ZU69 1335 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 DLEC1Q9Y238 1755 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 MSH4O15457 936 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 RPL10AP62906 217 aaKnown RBP9.39□□□□□ -0.91
NECAP1-207ENST00000544891 NFE2Q16621 373 aaPredicted RBP9.39□□□□□ -0.91
NECAP1-207ENST00000544891 LRRC23Q53EV4 343 aaPredicted RBP9.39□□□□□ -0.91
NECAP1-207ENST00000544891 ARHGAP15Q53QZ3 475 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 APLFQ8IW19 511 aaPredicted RBP9.39□□□□□ -0.91
NECAP1-207ENST00000544891 ZNF512Q96ME7 567 aaPredicted RBP9.39□□□□□ -0.91
NECAP1-207ENST00000544891 RBBP8Q99708 897 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 CCDC134Q9H6E4 229 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 SMYD3Q9H7B4 428 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 FAM32AQ9Y421 112 aaKnown RBP9.39□□□□□ -0.91
NECAP1-207ENST00000544891 TIMM44O43615 452 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 SUPT20HL2P0C7V6 817 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 DNAJB2P25686 324 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 COILP38432 576 aaPredicted RBP9.39□□□□□ -0.91
NECAP1-207ENST00000544891 PTGER2P43116 358 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 SLC11A2P49281 568 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 FCGRTP55899 365 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 POLE2P56282 527 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 EN1Q05925 392 aaPredicted RBP9.39□□□□□ -0.91
NECAP1-207ENST00000544891 WDR93Q6P2C0 686 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 SHCBP1Q8NEM2 672 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 ATG4CQ96DT6 458 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 ZSWIM1Q9BR11 485 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 RIOX1Q9H6W3 641 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 UTP6Q9NYH9 597 aaKnown RBP9.39□□□□□ -0.91
NECAP1-207ENST00000544891 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.39□□□□□ -0.91
NECAP1-207ENST00000544891 SH3BP1Q9Y3L3 701 aa9.39□□□□□ -0.91
NECAP1-207ENST00000544891 SLCO1B7G3V0H7 640 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 H0Y626 953 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 SOAT2O75908 522 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 TRIM16O95361 564 aa9.38□□□□□ -0.91
NECAP1-207ENST00000544891 ANXA11P50995 505 aaKnown RBP9.38□□□□□ -0.91
NECAP1-207ENST00000544891 MTF1Q14872 753 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms