RNA–Protein interactions for RNA: ENST00000544800.1

CIT-215, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-215ENST00000544800 SPNS3Q6ZMD2 512 aa7.57□□□□□ -1.2
CIT-215ENST00000544800 Q6ZNB5 142 aa7.57□□□□□ -1.2
CIT-215ENST00000544800 GAREM2Q75VX8 874 aa7.57□□□□□ -1.2
CIT-215ENST00000544800 HACE1Q8IYU2 909 aa7.57□□□□□ -1.2
CIT-215ENST00000544800 ENAHQ8N8S7 591 aaPredicted RBP7.57□□□□□ -1.2
CIT-215ENST00000544800 SPATA3Q8NHX4 192 aa7.57□□□□□ -1.2
CIT-215ENST00000544800 IGSF8Q969P0 613 aa7.57□□□□□ -1.2
CIT-215ENST00000544800 KIF1BPQ96EK5 621 aa7.57□□□□□ -1.2
CIT-215ENST00000544800 ECHDC1Q9NTX5 307 aa7.57□□□□□ -1.2
CIT-215ENST00000544800 CALCOCO1Q9P1Z2 691 aa7.57□□□□□ -1.2
CIT-215ENST00000544800 AFF4Q9UHB7 1163 aaKnown RBP7.57□□□□□ -1.2
CIT-215ENST00000544800 ADAMTS1Q9UHI8 967 aa7.57□□□□□ -1.2
CIT-215ENST00000544800 CYP8B1Q9UNU6 501 aa7.57□□□□□ -1.2
CIT-215ENST00000544800 HES2Q9Y543 173 aa7.57□□□□□ -1.2
CIT-215ENST00000544800 PCDHB1Q9Y5F3 818 aa7.57□□□□□ -1.2
CIT-215ENST00000544800 CSMD2Q7Z408 3487 aa7.56□□□□□ -1.2
CIT-215ENST00000544800 ANTXRLA6NF34 631 aa7.56□□□□□ -1.2
CIT-215ENST00000544800 CASTOR2A6NHX0 329 aa7.56□□□□□ -1.2
CIT-215ENST00000544800 ZBTB24O43167 697 aaPredicted RBP7.56□□□□□ -1.2
CIT-215ENST00000544800 TRAPPC3O43617 180 aa7.56□□□□□ -1.2
CIT-215ENST00000544800 DFNA5O60443 496 aa7.56□□□□□ -1.2
CIT-215ENST00000544800 SEMA7AO75326 666 aa7.56□□□□□ -1.2
CIT-215ENST00000544800 PRKCBP05771 671 aa7.56□□□□□ -1.2
CIT-215ENST00000544800 PRF1P14222 555 aa7.56□□□□□ -1.2
CIT-215ENST00000544800 GABRG2P18507 467 aa7.56□□□□□ -1.2
CIT-215ENST00000544800 ADRA1BP35368 520 aa7.56□□□□□ -1.2
CIT-215ENST00000544800 EPHB3P54753 998 aa7.56□□□□□ -1.2
CIT-215ENST00000544800 INSM1Q01101 510 aaPredicted RBP7.56□□□□□ -1.2
CIT-215ENST00000544800 KIF19Q2TAC6 998 aa7.56□□□□□ -1.2
CIT-215ENST00000544800 SMYD5Q6GMV2 418 aa7.56□□□□□ -1.2
CIT-215ENST00000544800 KANSL1Q7Z3B3 1105 aa7.56□□□□□ -1.2
CIT-215ENST00000544800 CATIPQ7Z7H3 387 aa7.56□□□□□ -1.2
CIT-215ENST00000544800 RHPN2Q8IUC4 686 aa7.56□□□□□ -1.2
CIT-215ENST00000544800 ATP2A3Q93084 1043 aa7.56□□□□□ -1.2
CIT-215ENST00000544800 SEC62Q99442 399 aaKnown RBP7.56□□□□□ -1.2
CIT-215ENST00000544800 ZKSCAN3Q9BRR0 538 aa7.56□□□□□ -1.2
CIT-215ENST00000544800 EIF2AQ9BY44 585 aaKnown RBP7.56□□□□□ -1.2
CIT-215ENST00000544800 SMG9Q9H0W8 520 aaKnown RBP7.56□□□□□ -1.2
CIT-215ENST00000544800 BCL11AQ9H165 835 aa7.56□□□□□ -1.2
CIT-215ENST00000544800 RIOX1Q9H6W3 641 aa7.56□□□□□ -1.2
CIT-215ENST00000544800 IFT122Q9HBG6 1241 aa7.56□□□□□ -1.2
CIT-215ENST00000544800 AGO4Q9HCK5 861 aaKnown RBP7.56□□□□□ -1.2
CIT-215ENST00000544800 ZMYM5Q9UJ78 669 aa7.56□□□□□ -1.2
CIT-215ENST00000544800 ITGB1BP2Q9UKP3 347 aa7.56□□□□□ -1.2
CIT-215ENST00000544800 ATXN7L1Q9ULK2 861 aaPredicted RBP7.56□□□□□ -1.2
CIT-215ENST00000544800 DDX39AO00148 427 aaKnown RBP7.55□□□□□ -1.2
CIT-215ENST00000544800 CBX4O00257 560 aa7.55□□□□□ -1.2
CIT-215ENST00000544800 FOXP2O15409 715 aa7.55□□□□□ -1.2
CIT-215ENST00000544800 HNRNPRO43390 633 aaKnown RBP7.55□□□□□ -1.2
CIT-215ENST00000544800 ADAM23O75077 832 aa7.55□□□□□ -1.2
CIT-215ENST00000544800 USP12O75317 370 aa7.55□□□□□ -1.2
CIT-215ENST00000544800 PSAPP07602 524 aa7.55□□□□□ -1.2
CIT-215ENST00000544800 PCP11498 1178 aaKnown RBP7.55□□□□□ -1.2
CIT-215ENST00000544800 AKAP5P24588 427 aa7.55□□□□□ -1.2
CIT-215ENST00000544800 TKTP29401 623 aaKnown RBP7.55□□□□□ -1.2
CIT-215ENST00000544800 RBMS1P29558 406 aaKnown RBP7.55□□□□□ -1.2
CIT-215ENST00000544800 AXLP30530 894 aa7.55□□□□□ -1.2
CIT-215ENST00000544800 CSNK1EP49674 416 aaKnown RBP7.55□□□□□ -1.2
CIT-215ENST00000544800 AFF3P51826 1226 aaKnown RBP7.55□□□□□ -1.2
CIT-215ENST00000544800 E2F1Q01094 437 aa7.55□□□□□ -1.2
CIT-215ENST00000544800 ST3GAL1Q11201 340 aa7.55□□□□□ -1.2
CIT-215ENST00000544800 CLN3Q13286 438 aa7.55□□□□□ -1.2
CIT-215ENST00000544800 PLD1Q13393 1074 aa7.55□□□□□ -1.2
CIT-215ENST00000544800 MORC3Q14149 939 aa7.55□□□□□ -1.2
CIT-215ENST00000544800 ZXDCQ2QGD7 858 aaPredicted RBP7.55□□□□□ -1.2
CIT-215ENST00000544800 SRGAP1Q7Z6B7 1085 aa7.55□□□□□ -1.2
CIT-215ENST00000544800 CMTM8Q8IZV2 173 aa7.55□□□□□ -1.2
CIT-215ENST00000544800 CADM4Q8NFZ8 388 aa7.55□□□□□ -1.2
CIT-215ENST00000544800 ESR2Q92731 530 aa7.55□□□□□ -1.2
CIT-215ENST00000544800 CCDC51Q96ER9 411 aa7.55□□□□□ -1.2
CIT-215ENST00000544800 NLRP4Q96MN2 994 aa7.55□□□□□ -1.2
CIT-215ENST00000544800 SLC46A2Q9BY10 475 aa7.55□□□□□ -1.2
CIT-215ENST00000544800 SUCLA2Q9P2R7 463 aaPredicted RBP7.55□□□□□ -1.2
CIT-215ENST00000544800 PHTF1Q9UMS5 762 aa7.55□□□□□ -1.2
CIT-215ENST00000544800 ASB3Q9Y575 518 aa7.55□□□□□ -1.2
CIT-215ENST00000544800 SNX11Q9Y5W9 270 aa7.55□□□□□ -1.2
CIT-215ENST00000544800 PCSK5Q92824 1860 aa7.54□□□□□ -1.2
CIT-215ENST00000544800 IGKV6-21A0A0C4DH24 114 aa7.54□□□□□ -1.2
CIT-215ENST00000544800 H0Y8X5 98 aa7.54□□□□□ -1.2
CIT-215ENST00000544800 H7C4K7 107 aa7.54□□□□□ -1.2
CIT-215ENST00000544800 TMEM189-UBE2V1I3L0A0 370 aa7.54□□□□□ -1.2
CIT-215ENST00000544800 LAD1O00515 517 aa7.54□□□□□ -1.2
CIT-215ENST00000544800 MTSS1O43312 755 aa7.54□□□□□ -1.2
CIT-215ENST00000544800 VPS4BO75351 444 aa7.54□□□□□ -1.2
CIT-215ENST00000544800 OATP04181 439 aa7.54□□□□□ -1.2
CIT-215ENST00000544800 DRD2P14416 443 aa7.54□□□□□ -1.2
CIT-215ENST00000544800 SMARCA1P28370 1054 aa7.54□□□□□ -1.2
CIT-215ENST00000544800 GABRR2P28476 465 aa7.54□□□□□ -1.2
CIT-215ENST00000544800 AVPR1AP37288 418 aa7.54□□□□□ -1.2
CIT-215ENST00000544800 MLLT3P42568 568 aaPredicted RBP7.54□□□□□ -1.2
CIT-215ENST00000544800 DUSP3P51452 185 aaPredicted RBP7.54□□□□□ -1.2
CIT-215ENST00000544800 NCBP1Q09161 790 aaKnown RBP7.54□□□□□ -1.2
CIT-215ENST00000544800 BFSP1Q12934 665 aa7.54□□□□□ -1.2
CIT-215ENST00000544800 NOLC1Q14978 699 aaKnown RBP eCLIP7.54□□□□□ -1.2
CIT-215ENST00000544800 CLCA4Q14CN2 919 aa7.54□□□□□ -1.2
CIT-215ENST00000544800 TESK1Q15569 626 aa7.54□□□□□ -1.2
CIT-215ENST00000544800 ALX1Q15699 326 aa7.54□□□□□ -1.2
CIT-215ENST00000544800 CEP55Q53EZ4 464 aa7.54□□□□□ -1.2
CIT-215ENST00000544800 CAPRIN2Q6IMN6 1127 aaKnown RBP7.54□□□□□ -1.2
CIT-215ENST00000544800 MFSD6Q6ZSS7 791 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms